RNA–Protein interactions for RNA: ENST00000490163.5

UBXN4-208, Transcript of UBX domain protein 4, humanhuman

TSL 2

Gene UBXN4, Length 3,394 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-208ENST00000490163 EXD2Q9NVH0 621 aa2.35□□□□□ -2.03
UBXN4-208ENST00000490163 C3orf18Q9UK00 162 aa2.35□□□□□ -2.03
UBXN4-208ENST00000490163 TRAPPC4Q9Y296 219 aa2.35□□□□□ -2.03
UBXN4-208ENST00000490163 KIF26AQ9ULI4 1882 aaPredicted RBP2.34□□□□□ -2.03
UBXN4-208ENST00000490163 PRORSD1PA6NEY8 169 aa2.34□□□□□ -2.03
UBXN4-208ENST00000490163 FAM74A7A6NL05 159 aa2.34□□□□□ -2.03
UBXN4-208ENST00000490163 EFCAB7A8K855 629 aa2.34□□□□□ -2.03
UBXN4-208ENST00000490163 IDSB3KWA1 339 aa2.34□□□□□ -2.03
UBXN4-208ENST00000490163 E7ESA3 106 aa2.34□□□□□ -2.03
UBXN4-208ENST00000490163 DNASE2O00115 360 aaPredicted RBP2.34□□□□□ -2.03
UBXN4-208ENST00000490163 SURF4O15260 269 aa2.34□□□□□ -2.03
UBXN4-208ENST00000490163 FABP7O15540 132 aa2.34□□□□□ -2.03
UBXN4-208ENST00000490163 HPGDSO60760 199 aa2.34□□□□□ -2.03
UBXN4-208ENST00000490163 DNAJB6O75190 326 aa2.34□□□□□ -2.03
UBXN4-208ENST00000490163 PROSCO94903 275 aa2.34□□□□□ -2.03
UBXN4-208ENST00000490163 NXPH2O95156 264 aa2.34□□□□□ -2.03
UBXN4-208ENST00000490163 SEMA4FO95754 770 aa2.34□□□□□ -2.03
UBXN4-208ENST00000490163 LALBAP00709 142 aa2.34□□□□□ -2.03
UBXN4-208ENST00000490163 EDN1P05305 212 aa2.34□□□□□ -2.03
UBXN4-208ENST00000490163 GP1BAP07359 652 aa2.34□□□□□ -2.03
UBXN4-208ENST00000490163 WNT2P09544 360 aa2.34□□□□□ -2.03
UBXN4-208ENST00000490163 TSPAN19P0C672 248 aa2.34□□□□□ -2.03
UBXN4-208ENST00000490163 RD3LP0DJH9 198 aa2.34□□□□□ -2.03
UBXN4-208ENST00000490163 UMPSP11172 480 aa2.34□□□□□ -2.03
UBXN4-208ENST00000490163 TSPAN8P19075 237 aa2.34□□□□□ -2.03
UBXN4-208ENST00000490163 LHCGRP22888 699 aa2.34□□□□□ -2.03
UBXN4-208ENST00000490163 C21orf33P30042 268 aaPredicted RBP2.34□□□□□ -2.03
UBXN4-208ENST00000490163 RFC3P40938 356 aa2.34□□□□□ -2.03
UBXN4-208ENST00000490163 MAGEA2P43356 314 aa2.34□□□□□ -2.03
UBXN4-208ENST00000490163 ERVK-16P61578 105 aa2.34□□□□□ -2.03
UBXN4-208ENST00000490163 RPS18P62269 152 aaKnown RBP2.34□□□□□ -2.03
UBXN4-208ENST00000490163 KRTAP15-1Q3LI76 137 aa2.34□□□□□ -2.03
UBXN4-208ENST00000490163 FAM74A3Q4VXF1 159 aa2.34□□□□□ -2.03
UBXN4-208ENST00000490163 MANEAQ5SRI9 462 aa2.34□□□□□ -2.03
UBXN4-208ENST00000490163 SYT6Q5T7P8 510 aaPredicted RBP2.34□□□□□ -2.03
UBXN4-208ENST00000490163 REP15Q6BDI9 236 aa2.34□□□□□ -2.03
UBXN4-208ENST00000490163 FAM131AQ6UXB0 335 aa2.34□□□□□ -2.03
UBXN4-208ENST00000490163 Q7L0L9 218 aa2.34□□□□□ -2.03
UBXN4-208ENST00000490163 TAC4Q86UU9 113 aa2.34□□□□□ -2.03
UBXN4-208ENST00000490163 ODF3L1Q8IXM7 274 aa2.34□□□□□ -2.03
UBXN4-208ENST00000490163 RDH10Q8IZV5 341 aa2.34□□□□□ -2.03
UBXN4-208ENST00000490163 BEST4Q8NFU0 473 aa2.34□□□□□ -2.03
UBXN4-208ENST00000490163 OR2L5Q8NG80 312 aa2.34□□□□□ -2.03
UBXN4-208ENST00000490163 OR5J2Q8NH18 312 aa2.34□□□□□ -2.03
UBXN4-208ENST00000490163 LRRC15Q8TF66 581 aa2.34□□□□□ -2.03
UBXN4-208ENST00000490163 TM9SF4Q92544 642 aa2.34□□□□□ -2.03
UBXN4-208ENST00000490163 ZNF524Q96C55 264 aa2.34□□□□□ -2.03
UBXN4-208ENST00000490163 FAF2Q96CS3 445 aa2.34□□□□□ -2.03
UBXN4-208ENST00000490163 AURKBQ96GD4 344 aaPredicted RBP2.34□□□□□ -2.03
UBXN4-208ENST00000490163 RNF145Q96MT1 663 aa2.34□□□□□ -2.03
UBXN4-208ENST00000490163 C8orf49Q96NF6 230 aa2.34□□□□□ -2.03
UBXN4-208ENST00000490163 DPH7Q9BTV6 452 aa2.34□□□□□ -2.03
UBXN4-208ENST00000490163 NKX6-2Q9C056 277 aaPredicted RBP2.34□□□□□ -2.03
UBXN4-208ENST00000490163 FOLH1BQ9HBA9 442 aa2.34□□□□□ -2.03
UBXN4-208ENST00000490163 TREM2Q9NZC2 230 aa2.34□□□□□ -2.03
UBXN4-208ENST00000490163 SPRR3Q9UBC9 169 aa2.34□□□□□ -2.03
UBXN4-208ENST00000490163 MRM2Q9UI43 246 aaKnown RBP2.34□□□□□ -2.03
UBXN4-208ENST00000490163 BTNL2Q9UIR0 455 aa2.34□□□□□ -2.03
UBXN4-208ENST00000490163 V9GYQ6 96 aa2.34□□□□□ -2.03
UBXN4-208ENST00000490163 GLYATL1P3A0A0U1RQE8 302 aa2.34□□□□□ -2.04
UBXN4-208ENST00000490163 C1orf196B1AJZ1 125 aa2.34□□□□□ -2.04
UBXN4-208ENST00000490163 DISC1C4P0D8 188 aa2.34□□□□□ -2.04
UBXN4-208ENST00000490163 INMT-MINDY4F8WBC2 141 aa2.34□□□□□ -2.04
UBXN4-208ENST00000490163 OR56A5P0C7T3 313 aa2.34□□□□□ -2.04
UBXN4-208ENST00000490163 FCGR2CP31995 323 aa2.34□□□□□ -2.04
UBXN4-208ENST00000490163 CCKARP32238 428 aa2.34□□□□□ -2.04
UBXN4-208ENST00000490163 MAS1LP35410 378 aa2.34□□□□□ -2.04
UBXN4-208ENST00000490163 RPL13AP40429 203 aaKnown RBP2.34□□□□□ -2.04
UBXN4-208ENST00000490163 GCLMP48507 274 aa2.34□□□□□ -2.04
UBXN4-208ENST00000490163 CX3CR1P49238 355 aa2.34□□□□□ -2.04
UBXN4-208ENST00000490163 RORCP51449 518 aa2.34□□□□□ -2.04
UBXN4-208ENST00000490163 XKP51811 444 aa2.34□□□□□ -2.04
UBXN4-208ENST00000490163 VPS26BQ4G0F5 336 aa2.34□□□□□ -2.04
UBXN4-208ENST00000490163 PYDC2Q56P42 97 aa2.34□□□□□ -2.04
UBXN4-208ENST00000490163 TMEM255AQ5JRV8 349 aa2.34□□□□□ -2.04
UBXN4-208ENST00000490163 TMEM31Q5JXX7 168 aa2.34□□□□□ -2.04
UBXN4-208ENST00000490163 ZNF470Q6ECI4 717 aa2.34□□□□□ -2.04
UBXN4-208ENST00000490163 LCN8Q6JVE9 175 aa2.34□□□□□ -2.04
UBXN4-208ENST00000490163 FAM45BPQ6NSW5 357 aa2.34□□□□□ -2.04
UBXN4-208ENST00000490163 SH2D5Q6ZV89 423 aa2.34□□□□□ -2.04
UBXN4-208ENST00000490163 PGAP1Q75T13 922 aa2.34□□□□□ -2.04
UBXN4-208ENST00000490163 PID1Q7Z2X4 250 aa2.34□□□□□ -2.04
UBXN4-208ENST00000490163 LHFPL3Q86UP9 236 aa2.34□□□□□ -2.04
UBXN4-208ENST00000490163 PPP1R27Q86WC6 154 aa2.34□□□□□ -2.04
UBXN4-208ENST00000490163 TMEM17Q86X19 198 aa2.34□□□□□ -2.04
UBXN4-208ENST00000490163 CCDC71Q8IV32 467 aaPredicted RBP2.34□□□□□ -2.04
UBXN4-208ENST00000490163 OR10V1Q8NGI7 309 aa2.34□□□□□ -2.04
UBXN4-208ENST00000490163 OR8D4Q8NGM9 314 aa2.34□□□□□ -2.04
UBXN4-208ENST00000490163 OR4C3Q8NH37 302 aa2.34□□□□□ -2.04
UBXN4-208ENST00000490163 SPPL2AQ8TCT8 520 aa2.34□□□□□ -2.04
UBXN4-208ENST00000490163 FAM151AQ8WW52 585 aa2.34□□□□□ -2.04
UBXN4-208ENST00000490163 CRYGNQ8WXF5 182 aa2.34□□□□□ -2.04
UBXN4-208ENST00000490163 CHCHD10Q8WYQ3 142 aaPredicted RBP2.34□□□□□ -2.04
UBXN4-208ENST00000490163 RASL10AQ92737 203 aa2.34□□□□□ -2.04
UBXN4-208ENST00000490163 MRPL24Q96A35 216 aaKnown RBP2.34□□□□□ -2.04
UBXN4-208ENST00000490163 OR5M11Q96RB7 305 aa2.34□□□□□ -2.04
UBXN4-208ENST00000490163 TSNAXQ99598 290 aaKnown RBP2.34□□□□□ -2.04
UBXN4-208ENST00000490163 MAPKAP1Q9BPZ7 522 aa2.34□□□□□ -2.04
UBXN4-208ENST00000490163 SYT11Q9BT88 431 aa2.34□□□□□ -2.04
UBXN4-208ENST00000490163 POMKQ9H5K3 350 aa2.34□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms