RNA–Protein interactions for RNA: ENST00000489583.1

APTX-229, Transcript of aprataxin, humanhuman

TSL 3

Gene APTX, Length 397 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-229ENST00000489583 KCNJ15Q99712 375 aa16.08■□□□□ 0.16
APTX-229ENST00000489583 SIRPDQ9H106 197 aa16.08■□□□□ 0.16
APTX-229ENST00000489583 RNPEPL1Q9HAU8 725 aa16.08■□□□□ 0.16
APTX-229ENST00000489583 SMURF1Q9HCE7 757 aa16.08■□□□□ 0.16
APTX-229ENST00000489583 MRPL22Q9NWU5 206 aaKnown RBP16.08■□□□□ 0.16
APTX-229ENST00000489583 RPUSD1Q9UJJ7 312 aaKnown RBP16.08■□□□□ 0.16
APTX-229ENST00000489583 ANKRD61A6NGH8 418 aa16.07■□□□□ 0.16
APTX-229ENST00000489583 TVP23AA6NH52 213 aa16.07■□□□□ 0.16
APTX-229ENST00000489583 ZNF878C9JN71 531 aa16.07■□□□□ 0.16
APTX-229ENST00000489583 GNGT2O14610 69 aa16.07■□□□□ 0.16
APTX-229ENST00000489583 ANXA2P07355 339 aaKnown RBP16.07■□□□□ 0.16
APTX-229ENST00000489583 GRB2P62993 217 aaKnown RBP16.07■□□□□ 0.16
APTX-229ENST00000489583 C2orf68Q2NKX9 166 aa16.07■□□□□ 0.16
APTX-229ENST00000489583 LRRC10Q5BKY1 277 aa16.07■□□□□ 0.16
APTX-229ENST00000489583 ZNF826PQ6ZT77 177 aa16.07■□□□□ 0.16
APTX-229ENST00000489583 CYB561A3Q8NBI2 242 aa16.07■□□□□ 0.16
APTX-229ENST00000489583 LRRC29Q8WV35 223 aa16.07■□□□□ 0.16
APTX-229ENST00000489583 SLAMF6Q96DU3 332 aa16.07■□□□□ 0.16
APTX-229ENST00000489583 PKP2Q99959 881 aa16.07■□□□□ 0.16
APTX-229ENST00000489583 REEP1Q9H902 201 aa16.07■□□□□ 0.16
APTX-229ENST00000489583 KAAG1Q9UBP8 84 aa16.07■□□□□ 0.16
APTX-229ENST00000489583 IGHV3OR15-7A0A075B7D8 119 aa16.06■□□□□ 0.16
APTX-229ENST00000489583 SLC22A31A6NKX4 558 aa16.06■□□□□ 0.16
APTX-229ENST00000489583 ANXA2P2A6NMY6 339 aa16.06■□□□□ 0.16
APTX-229ENST00000489583 CLPXO76031 633 aa16.06■□□□□ 0.16
APTX-229ENST00000489583 RPS27P42677 84 aaKnown RBP16.06■□□□□ 0.16
APTX-229ENST00000489583 ENTPD1P49961 510 aa16.06■□□□□ 0.16
APTX-229ENST00000489583 BLVRAP53004 296 aa16.06■□□□□ 0.16
APTX-229ENST00000489583 POU4F2Q12837 409 aa16.06■□□□□ 0.16
APTX-229ENST00000489583 GK3PQ14409 553 aa16.06■□□□□ 0.16
APTX-229ENST00000489583 TEX36Q5VZQ5 186 aa16.06■□□□□ 0.16
APTX-229ENST00000489583 OR2T5Q6IEZ7 315 aa16.06■□□□□ 0.16
APTX-229ENST00000489583 GCSAMQ8N6F7 178 aa16.06■□□□□ 0.16
APTX-229ENST00000489583 OR2T29Q8NH02 315 aa16.06■□□□□ 0.16
APTX-229ENST00000489583 DMRTB1Q96MA1 342 aa16.06■□□□□ 0.16
APTX-229ENST00000489583 FUZQ9BT04 418 aa16.06■□□□□ 0.16
APTX-229ENST00000489583 DNAJB11Q9UBS4 358 aa16.06■□□□□ 0.16
APTX-229ENST00000489583 CDH10Q9Y6N8 788 aa16.06■□□□□ 0.16
APTX-229ENST00000489583 ERICH4A6NGS2 130 aa16.05■□□□□ 0.16
APTX-229ENST00000489583 NKX6-3A6NJ46 265 aa16.05■□□□□ 0.16
APTX-229ENST00000489583 TNFRSF11BO00300 401 aa16.05■□□□□ 0.16
APTX-229ENST00000489583 ZNF593O00488 134 aaPredicted RBP16.05■□□□□ 0.16
APTX-229ENST00000489583 FKBP6O75344 327 aa16.05■□□□□ 0.16
APTX-229ENST00000489583 CST1P01037 141 aa16.05■□□□□ 0.16
APTX-229ENST00000489583 IFNGP01579 166 aa16.05■□□□□ 0.16
APTX-229ENST00000489583 SLC2A1P11166 492 aa16.05■□□□□ 0.16
APTX-229ENST00000489583 OTX1P32242 354 aaPredicted RBP16.05■□□□□ 0.16
APTX-229ENST00000489583 TGFBR2P37173 567 aa16.05■□□□□ 0.16
APTX-229ENST00000489583 GSSP48637 474 aa16.05■□□□□ 0.16
APTX-229ENST00000489583 ACTR3P61158 418 aa16.05■□□□□ 0.16
APTX-229ENST00000489583 HOXA4Q00056 320 aaPredicted RBP16.05■□□□□ 0.16
APTX-229ENST00000489583 BLMHQ13867 455 aa16.05■□□□□ 0.16
APTX-229ENST00000489583 ASPHD2Q6ICH7 369 aa16.05■□□□□ 0.16
APTX-229ENST00000489583 PAPD5Q8NDF8 572 aaKnown RBP16.05■□□□□ 0.16
APTX-229ENST00000489583 OR51L1Q8NGJ5 315 aa16.05■□□□□ 0.16
APTX-229ENST00000489583 OR6K6Q8NGW6 343 aa16.05■□□□□ 0.16
APTX-229ENST00000489583 H1FXQ92522 213 aaKnown RBP16.05■□□□□ 0.16
APTX-229ENST00000489583 CCL13Q99616 98 aa16.05■□□□□ 0.16
APTX-229ENST00000489583 MICU1Q9BPX6 476 aa16.05■□□□□ 0.16
APTX-229ENST00000489583 TOR3AQ9H497 397 aa16.05■□□□□ 0.16
APTX-229ENST00000489583 EGLN3Q9H6Z9 239 aa16.05■□□□□ 0.16
APTX-229ENST00000489583 TBC1D23Q9NUY8 699 aa16.05■□□□□ 0.16
APTX-229ENST00000489583 VWFP04275 2813 aa16.04■□□□□ 0.16
APTX-229ENST00000489583 POU1F1P28069 291 aa16.04■□□□□ 0.16
APTX-229ENST00000489583 CX3CR1P49238 355 aa16.04■□□□□ 0.16
APTX-229ENST00000489583 DBPQ10586 325 aaPredicted RBP16.04■□□□□ 0.16
APTX-229ENST00000489583 IKZF1Q13422 519 aa16.04■□□□□ 0.16
APTX-229ENST00000489583 KPNB1Q14974 876 aaKnown RBP16.04■□□□□ 0.16
APTX-229ENST00000489583 PCK2Q16822 640 aa16.04■□□□□ 0.16
APTX-229ENST00000489583 GFOD2Q3B7J2 385 aa16.04■□□□□ 0.16
APTX-229ENST00000489583 GALNT4Q8N4A0 578 aa16.04■□□□□ 0.16
APTX-229ENST00000489583 ZSCAN4Q8NAM6 433 aaPredicted RBP16.04■□□□□ 0.16
APTX-229ENST00000489583 CSNK2A3Q8NEV1 391 aa16.04■□□□□ 0.16
APTX-229ENST00000489583 OR52H1Q8NGJ2 320 aa16.04■□□□□ 0.16
APTX-229ENST00000489583 OR5R1Q8NH85 324 aa16.04■□□□□ 0.16
APTX-229ENST00000489583 FAM110DQ8TAY7 271 aaPredicted RBP16.04■□□□□ 0.16
APTX-229ENST00000489583 C12orf43Q96C57 262 aaKnown RBP16.04■□□□□ 0.16
APTX-229ENST00000489583 REEP6Q96HR9 211 aa16.04■□□□□ 0.16
APTX-229ENST00000489583 PAPOLGQ9BWT3 736 aaKnown RBP16.04■□□□□ 0.16
APTX-229ENST00000489583 VPREB3Q9UKI3 123 aa16.04■□□□□ 0.16
APTX-229ENST00000489583 BAIAP2Q9UQB8 552 aa16.04■□□□□ 0.16
APTX-229ENST00000489583 SAMHD1Q9Y3Z3 626 aaKnown RBP16.04■□□□□ 0.16
APTX-229ENST00000489583 AP4S1Q9Y587 144 aa16.04■□□□□ 0.16
APTX-229ENST00000489583 COMMD3-BMI1R4GMX3 469 aa16.04■□□□□ 0.16
APTX-229ENST00000489583 LHBP01229 141 aa16.03■□□□□ 0.16
APTX-229ENST00000489583 FCGR1AP12314 374 aa16.03■□□□□ 0.16
APTX-229ENST00000489583 IL5RAQ01344 420 aa16.03■□□□□ 0.16
APTX-229ENST00000489583 PGBD2Q6P3X8 592 aa16.03■□□□□ 0.16
APTX-229ENST00000489583 HIST2H2ABQ8IUE6 130 aaPredicted RBP16.03■□□□□ 0.16
APTX-229ENST00000489583 OR1M1Q8NGA1 313 aa16.03■□□□□ 0.16
APTX-229ENST00000489583 OR9Q1Q8NGQ5 310 aa16.03■□□□□ 0.16
APTX-229ENST00000489583 DUS3LQ96G46 650 aaKnown RBP16.03■□□□□ 0.16
APTX-229ENST00000489583 RTL8AQ9BWD3 113 aa16.03■□□□□ 0.16
APTX-229ENST00000489583 OR10A2Q9H208 303 aa16.03■□□□□ 0.16
APTX-229ENST00000489583 ABCB9Q9NP78 766 aa16.03■□□□□ 0.16
APTX-229ENST00000489583 ARMC1Q9NVT9 282 aa16.03■□□□□ 0.16
APTX-229ENST00000489583 RIIAD1A6NNX1 92 aa16.02■□□□□ 0.16
APTX-229ENST00000489583 E2F6O75461 281 aa16.02■□□□□ 0.16
APTX-229ENST00000489583 CSF1P09603 554 aa16.02■□□□□ 0.16
APTX-229ENST00000489583 HMGA2P52926 109 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms