RNA–Protein interactions for RNA: ENST00000489554.1

SCAMP4-208, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 3

Gene SCAMP4, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-208ENST00000489554 ZCCHC24Q8N2G6 241 aaKnown RBP9.02□□□□□ -0.97
SCAMP4-208ENST00000489554 YIPF7Q8N8F6 280 aa9.02□□□□□ -0.97
SCAMP4-208ENST00000489554 DYNC2LI1Q8TCX1 351 aa9.02□□□□□ -0.97
SCAMP4-208ENST00000489554 UBASH3BQ8TF42 649 aa9.02□□□□□ -0.97
SCAMP4-208ENST00000489554 PPP1R14AQ96A00 147 aa9.02□□□□□ -0.97
SCAMP4-208ENST00000489554 PGLYRP3Q96LB9 341 aa9.02□□□□□ -0.97
SCAMP4-208ENST00000489554 C4orf45Q96LM5 186 aa9.02□□□□□ -0.97
SCAMP4-208ENST00000489554 BPESC1Q9GZL8 116 aa9.02□□□□□ -0.97
SCAMP4-208ENST00000489554 TPK1Q9H3S4 243 aa9.02□□□□□ -0.97
SCAMP4-208ENST00000489554 TMEM160Q9NX00 188 aa9.02□□□□□ -0.97
SCAMP4-208ENST00000489554 NDUFB11Q9NX14 153 aa9.02□□□□□ -0.97
SCAMP4-208ENST00000489554 ZNF319Q9P2F9 582 aa9.02□□□□□ -0.97
SCAMP4-208ENST00000489554 DUSP13Q9UII6 198 aa9.02□□□□□ -0.97
SCAMP4-208ENST00000489554 PEX16Q9Y5Y5 336 aa9.02□□□□□ -0.97
SCAMP4-208ENST00000489554 ABCA1O95477 2261 aa9.02□□□□□ -0.97
SCAMP4-208ENST00000489554 IGLV3-9A0A075B6K5 115 aa9.01□□□□□ -0.97
SCAMP4-208ENST00000489554 OR4C45A6NMZ5 311 aa9.01□□□□□ -0.97
SCAMP4-208ENST00000489554 ICMTO60725 284 aa9.01□□□□□ -0.97
SCAMP4-208ENST00000489554 RPP14O95059 124 aaKnown RBP9.01□□□□□ -0.97
SCAMP4-208ENST00000489554 IGLV3-1P01715 115 aa9.01□□□□□ -0.97
SCAMP4-208ENST00000489554 HLA-DPB1P04440 258 aa9.01□□□□□ -0.97
SCAMP4-208ENST00000489554 IGHV4-31P0DP07 118 aa9.01□□□□□ -0.97
SCAMP4-208ENST00000489554 ZNF250P15622 560 aa9.01□□□□□ -0.97
SCAMP4-208ENST00000489554 GADD45AP24522 165 aa9.01□□□□□ -0.97
SCAMP4-208ENST00000489554 STOMP27105 288 aa9.01□□□□□ -0.97
SCAMP4-208ENST00000489554 GABRA5P31644 462 aa9.01□□□□□ -0.97
SCAMP4-208ENST00000489554 ALDH3B1P43353 468 aa9.01□□□□□ -0.97
SCAMP4-208ENST00000489554 TGM4P49221 684 aa9.01□□□□□ -0.97
SCAMP4-208ENST00000489554 GDI2P50395 445 aaKnown RBP9.01□□□□□ -0.97
SCAMP4-208ENST00000489554 MMP16P51512 607 aa9.01□□□□□ -0.97
SCAMP4-208ENST00000489554 PRKXP51817 358 aa9.01□□□□□ -0.97
SCAMP4-208ENST00000489554 RIDAP52758 137 aaKnown RBP9.01□□□□□ -0.97
SCAMP4-208ENST00000489554 KLF3P57682 345 aaPredicted RBP9.01□□□□□ -0.97
SCAMP4-208ENST00000489554 GRB2P62993 217 aaKnown RBP9.01□□□□□ -0.97
SCAMP4-208ENST00000489554 ECH1Q13011 328 aa9.01□□□□□ -0.97
SCAMP4-208ENST00000489554 MRPL28Q13084 256 aaKnown RBP9.01□□□□□ -0.97
SCAMP4-208ENST00000489554 CDK5R1Q15078 307 aa9.01□□□□□ -0.97
SCAMP4-208ENST00000489554 NKPD1Q17RQ9 610 aa9.01□□□□□ -0.97
SCAMP4-208ENST00000489554 CHRFAM7AQ494W8 412 aa9.01□□□□□ -0.97
SCAMP4-208ENST00000489554 ZNF404Q494X3 552 aa9.01□□□□□ -0.97
SCAMP4-208ENST00000489554 WDR38Q5JTN6 314 aa9.01□□□□□ -0.97
SCAMP4-208ENST00000489554 LRP11Q86VZ4 500 aa9.01□□□□□ -0.97
SCAMP4-208ENST00000489554 PRIMA1Q86XR5 153 aa9.01□□□□□ -0.97
SCAMP4-208ENST00000489554 C1orf174Q8IYL3 243 aa9.01□□□□□ -0.97
SCAMP4-208ENST00000489554 ZFP41Q8N8Y5 198 aa9.01□□□□□ -0.97
SCAMP4-208ENST00000489554 OR2G2Q8NGZ5 317 aa9.01□□□□□ -0.97
SCAMP4-208ENST00000489554 MCFD2Q8NI22 146 aa9.01□□□□□ -0.97
SCAMP4-208ENST00000489554 SYNPRQ8TBG9 265 aa9.01□□□□□ -0.97
SCAMP4-208ENST00000489554 RGP1Q92546 391 aaPredicted RBP9.01□□□□□ -0.97
SCAMP4-208ENST00000489554 C1QTNF5Q9BXJ0 243 aa9.01□□□□□ -0.97
SCAMP4-208ENST00000489554 MROQ9BYG7 248 aa9.01□□□□□ -0.97
SCAMP4-208ENST00000489554 NIPAL2Q9H841 368 aa9.01□□□□□ -0.97
SCAMP4-208ENST00000489554 TRIM36Q9NQ86 728 aa9.01□□□□□ -0.97
SCAMP4-208ENST00000489554 FRRS1LQ9P0K9 344 aa9.01□□□□□ -0.97
SCAMP4-208ENST00000489554 EIF3KQ9UBQ5 218 aaKnown RBP9.01□□□□□ -0.97
SCAMP4-208ENST00000489554 FZR1Q9UM11 496 aa9.01□□□□□ -0.97
SCAMP4-208ENST00000489554 SLC22A13Q9Y226 551 aa9.01□□□□□ -0.97
SCAMP4-208ENST00000489554 SF3B6Q9Y3B4 125 aaKnown RBP9.01□□□□□ -0.97
SCAMP4-208ENST00000489554 R4GMQ9 66 aa9.01□□□□□ -0.97
SCAMP4-208ENST00000489554 JMJD1CQ15652 2540 aa9□□□□□ -0.97
SCAMP4-208ENST00000489554 IGHV4-61A0A0C4DH41 118 aa9□□□□□ -0.97
SCAMP4-208ENST00000489554 LOC100506127A0A0U1RQW1 187 aa9□□□□□ -0.97
SCAMP4-208ENST00000489554 F5H5K5 113 aa9□□□□□ -0.97
SCAMP4-208ENST00000489554 M0R135 149 aa9□□□□□ -0.97
SCAMP4-208ENST00000489554 PLPP2O43688 288 aa9□□□□□ -0.97
SCAMP4-208ENST00000489554 IL1AP01583 271 aa9□□□□□ -0.97
SCAMP4-208ENST00000489554 TTRP02766 147 aa9□□□□□ -0.97
SCAMP4-208ENST00000489554 TACSTD2P09758 323 aa9□□□□□ -0.97
SCAMP4-208ENST00000489554 SLC2A1P11166 492 aa9□□□□□ -0.97
SCAMP4-208ENST00000489554 ZNF16P17020 682 aaPredicted RBP9□□□□□ -0.97
SCAMP4-208ENST00000489554 CCNOP22674 350 aa9□□□□□ -0.97
SCAMP4-208ENST00000489554 CX3CR1P49238 355 aa9□□□□□ -0.97
SCAMP4-208ENST00000489554 RORCP51449 518 aa9□□□□□ -0.97
SCAMP4-208ENST00000489554 ZNF121P58317 390 aaPredicted RBP9□□□□□ -0.97
SCAMP4-208ENST00000489554 RPS11P62280 158 aaKnown RBP eCLIP9□□□□□ -0.97
SCAMP4-208ENST00000489554 LSM3P62310 102 aaKnown RBP9□□□□□ -0.97
SCAMP4-208ENST00000489554 MRPS11P82912 194 aaKnown RBP9□□□□□ -0.97
SCAMP4-208ENST00000489554 ZNF45Q02386 682 aa9□□□□□ -0.97
SCAMP4-208ENST00000489554 RIN1Q13671 783 aa9□□□□□ -0.97
SCAMP4-208ENST00000489554 ALKBH1Q13686 389 aaKnown RBP9□□□□□ -0.97
SCAMP4-208ENST00000489554 SNAI3Q3KNW1 292 aa9□□□□□ -0.97
SCAMP4-208ENST00000489554 CCDC58Q4VC31 144 aa9□□□□□ -0.97
SCAMP4-208ENST00000489554 C16orf87Q6PH81 154 aa9□□□□□ -0.97
SCAMP4-208ENST00000489554 PHC2Q8IXK0 858 aa9□□□□□ -0.97
SCAMP4-208ENST00000489554 ZNF101Q8IZC7 436 aa9□□□□□ -0.97
SCAMP4-208ENST00000489554 OR8B12Q8NGG6 310 aa9□□□□□ -0.97
SCAMP4-208ENST00000489554 OR1J1Q8NGS3 322 aa9□□□□□ -0.97
SCAMP4-208ENST00000489554 AP3S1Q92572 193 aa9□□□□□ -0.97
SCAMP4-208ENST00000489554 RDH5Q92781 318 aa9□□□□□ -0.97
SCAMP4-208ENST00000489554 ZNF799Q96GE5 643 aa9□□□□□ -0.97
SCAMP4-208ENST00000489554 KCTD7Q96MP8 289 aa9□□□□□ -0.97
SCAMP4-208ENST00000489554 DCLRE1CQ96SD1 692 aaKnown RBP9□□□□□ -0.97
SCAMP4-208ENST00000489554 CHCHD6Q9BRQ6 235 aa9□□□□□ -0.97
SCAMP4-208ENST00000489554 OR51B6Q9H340 312 aa9□□□□□ -0.97
SCAMP4-208ENST00000489554 POFUT1Q9H488 388 aa9□□□□□ -0.97
SCAMP4-208ENST00000489554 EXOSC4Q9NPD3 245 aaKnown RBP9□□□□□ -0.97
SCAMP4-208ENST00000489554 TAAR3PQ9P1P4 343 aa9□□□□□ -0.97
SCAMP4-208ENST00000489554 MYEF2Q9P2K5 600 aaKnown RBP9□□□□□ -0.97
SCAMP4-208ENST00000489554 LPAR3Q9UBY5 353 aa9□□□□□ -0.97
SCAMP4-208ENST00000489554 NUFIP1Q9UHK0 495 aaKnown RBP9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms