RNA–Protein interactions for RNA: ENST00000489378.5

SSBP1-212, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 2

Gene SSBP1, Length 1,434 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-212ENST00000489378 IMPA2O14732 288 aa7.3□□□□□ -1.24
SSBP1-212ENST00000489378 POLR3GO15318 223 aaPredicted RBP7.3□□□□□ -1.24
SSBP1-212ENST00000489378 JTBO76095 146 aa7.3□□□□□ -1.24
SSBP1-212ENST00000489378 LCATP04180 440 aa7.3□□□□□ -1.24
SSBP1-212ENST00000489378 IDO1P14902 403 aa7.3□□□□□ -1.24
SSBP1-212ENST00000489378 CPEP16870 476 aa7.3□□□□□ -1.24
SSBP1-212ENST00000489378 NDUFB7P17568 137 aa7.3□□□□□ -1.24
SSBP1-212ENST00000489378 CD247P20963 164 aa7.3□□□□□ -1.24
SSBP1-212ENST00000489378 RBM34P42696 430 aaKnown RBP7.3□□□□□ -1.24
SSBP1-212ENST00000489378 SLC1A6P48664 564 aa7.3□□□□□ -1.24
SSBP1-212ENST00000489378 LGALS4P56470 323 aa7.3□□□□□ -1.24
SSBP1-212ENST00000489378 GMFBP60983 142 aa7.3□□□□□ -1.24
SSBP1-212ENST00000489378 LSM6P62312 80 aaKnown RBP7.3□□□□□ -1.24
SSBP1-212ENST00000489378 MALLQ13021 153 aa7.3□□□□□ -1.24
SSBP1-212ENST00000489378 FHL1Q13642 323 aa7.3□□□□□ -1.24
SSBP1-212ENST00000489378 LDLRAD2Q5SZI1 272 aa7.3□□□□□ -1.24
SSBP1-212ENST00000489378 WDR82Q6UXN9 313 aa7.3□□□□□ -1.24
SSBP1-212ENST00000489378 ZSCAN2Q7Z7L9 614 aaPredicted RBP7.3□□□□□ -1.24
SSBP1-212ENST00000489378 OR51D1Q8NGF3 324 aa7.3□□□□□ -1.24
SSBP1-212ENST00000489378 UBLCP1Q8WVY7 318 aaPredicted RBP7.3□□□□□ -1.24
SSBP1-212ENST00000489378 TMEM239Q8WW34 195 aa7.3□□□□□ -1.24
SSBP1-212ENST00000489378 C12orf43Q96C57 262 aaKnown RBP7.3□□□□□ -1.24
SSBP1-212ENST00000489378 FANCD2OSQ96PS1 177 aa7.3□□□□□ -1.24
SSBP1-212ENST00000489378 HDHD2Q9H0R4 259 aa7.3□□□□□ -1.24
SSBP1-212ENST00000489378 RERGLQ9H628 205 aa7.3□□□□□ -1.24
SSBP1-212ENST00000489378 RNPEPL1Q9HAU8 725 aa7.3□□□□□ -1.24
SSBP1-212ENST00000489378 KCNK9Q9NPC2 374 aa7.3□□□□□ -1.24
SSBP1-212ENST00000489378 SDR39U1Q9NRG7 319 aaPredicted RBP7.3□□□□□ -1.24
SSBP1-212ENST00000489378 ABCB10Q9NRK6 738 aa7.3□□□□□ -1.24
SSBP1-212ENST00000489378 SNTG1Q9NSN8 517 aa7.3□□□□□ -1.24
SSBP1-212ENST00000489378 COA3Q9Y2R0 106 aaPredicted RBP7.3□□□□□ -1.24
SSBP1-212ENST00000489378 POLR1DQ9Y2S0 133 aa7.3□□□□□ -1.24
SSBP1-212ENST00000489378 HECTD4Q9Y4D8 3996 aa7.3□□□□□ -1.24
SSBP1-212ENST00000489378 LHFPL6Q9Y693 200 aa7.3□□□□□ -1.24
SSBP1-212ENST00000489378 TRAV27A0A087WT01 109 aa7.29□□□□□ -1.24
SSBP1-212ENST00000489378 F5H5K5 113 aa7.29□□□□□ -1.24
SSBP1-212ENST00000489378 RHBDL1O75783 438 aa7.29□□□□□ -1.24
SSBP1-212ENST00000489378 CEBPDP49716 269 aaPredicted RBP7.29□□□□□ -1.24
SSBP1-212ENST00000489378 ZNF92Q03936 586 aa7.29□□□□□ -1.24
SSBP1-212ENST00000489378 SSX2Q16385 188 aa7.29□□□□□ -1.24
SSBP1-212ENST00000489378 MEP1BQ16820 701 aa7.29□□□□□ -1.24
SSBP1-212ENST00000489378 WHAMMP3Q1A5X7 153 aa7.29□□□□□ -1.24
SSBP1-212ENST00000489378 MESTQ5EB52 335 aa7.29□□□□□ -1.24
SSBP1-212ENST00000489378 LRIF1Q5T3J3 769 aa7.29□□□□□ -1.24
SSBP1-212ENST00000489378 MZT2BQ6NZ67 158 aa7.29□□□□□ -1.24
SSBP1-212ENST00000489378 C16orf54Q6UWD8 224 aa7.29□□□□□ -1.24
SSBP1-212ENST00000489378 ZNF788Q6ZQV5 615 aa7.29□□□□□ -1.24
SSBP1-212ENST00000489378 OVCH2Q7RTZ1 564 aa7.29□□□□□ -1.24
SSBP1-212ENST00000489378 ANKRD13BQ86YJ7 626 aa7.29□□□□□ -1.24
SSBP1-212ENST00000489378 GLB1L2Q8IW92 636 aa7.29□□□□□ -1.24
SSBP1-212ENST00000489378 IFT20Q8IY31 132 aa7.29□□□□□ -1.24
SSBP1-212ENST00000489378 FAM185AQ8N0U4 392 aa7.29□□□□□ -1.24
SSBP1-212ENST00000489378 OR8H2Q8N162 312 aa7.29□□□□□ -1.24
SSBP1-212ENST00000489378 LNX2Q8N448 690 aa7.29□□□□□ -1.24
SSBP1-212ENST00000489378 C11orf42Q8N5U0 333 aa7.29□□□□□ -1.24
SSBP1-212ENST00000489378 OR52H1Q8NGJ2 320 aa7.29□□□□□ -1.24
SSBP1-212ENST00000489378 OR51A7Q8NH64 312 aa7.29□□□□□ -1.24
SSBP1-212ENST00000489378 OR2AE1Q8NHA4 323 aa7.29□□□□□ -1.24
SSBP1-212ENST00000489378 Q96M85 177 aa7.29□□□□□ -1.24
SSBP1-212ENST00000489378 DUX3Q96PT4 197 aa7.29□□□□□ -1.24
SSBP1-212ENST00000489378 P2RX4Q99571 388 aa7.29□□□□□ -1.24
SSBP1-212ENST00000489378 WDR13Q9H1Z4 485 aa7.29□□□□□ -1.24
SSBP1-212ENST00000489378 HEXA-AS1Q9H8Q6 139 aa7.29□□□□□ -1.24
SSBP1-212ENST00000489378 EDA2RQ9HAV5 297 aa7.29□□□□□ -1.24
SSBP1-212ENST00000489378 C19orf12Q9NSK7 152 aa7.29□□□□□ -1.24
SSBP1-212ENST00000489378 HAO2Q9NYQ3 351 aa7.29□□□□□ -1.24
SSBP1-212ENST00000489378 MRPL15Q9P015 296 aaKnown RBP7.29□□□□□ -1.24
SSBP1-212ENST00000489378 VAPAQ9P0L0 249 aa7.29□□□□□ -1.24
SSBP1-212ENST00000489378 ADAM18Q9Y3Q7 739 aa7.29□□□□□ -1.24
SSBP1-212ENST00000489378 SMAD5-AS1Q9Y6J3 95 aa7.29□□□□□ -1.24
SSBP1-212ENST00000489378 DNAH10Q8IVF4 4471 aa7.29□□□□□ -1.24
SSBP1-212ENST00000489378 PRSS37A4D1T9 235 aa7.28□□□□□ -1.24
SSBP1-212ENST00000489378 GGT3PA6NGU5 568 aa7.28□□□□□ -1.24
SSBP1-212ENST00000489378 TYROBPO43914 113 aa7.28□□□□□ -1.24
SSBP1-212ENST00000489378 SLC16A7O60669 478 aa7.28□□□□□ -1.24
SSBP1-212ENST00000489378 GLCEO94923 617 aa7.28□□□□□ -1.24
SSBP1-212ENST00000489378 LPLP06858 475 aa7.28□□□□□ -1.24
SSBP1-212ENST00000489378 GPX2P18283 190 aa7.28□□□□□ -1.24
SSBP1-212ENST00000489378 TNFRSF1BP20333 461 aa7.28□□□□□ -1.24
SSBP1-212ENST00000489378 GGT2P36268 569 aa7.28□□□□□ -1.24
SSBP1-212ENST00000489378 CAV3P56539 151 aa7.28□□□□□ -1.24
SSBP1-212ENST00000489378 RPL23AP62750 156 aaKnown RBP7.28□□□□□ -1.24
SSBP1-212ENST00000489378 KRT72Q14CN4 511 aa7.28□□□□□ -1.24
SSBP1-212ENST00000489378 KCNMB1Q16558 191 aa7.28□□□□□ -1.24
SSBP1-212ENST00000489378 SNAI3Q3KNW1 292 aa7.28□□□□□ -1.24
SSBP1-212ENST00000489378 CFAP77Q6ZQR2 320 aa7.28□□□□□ -1.24
SSBP1-212ENST00000489378 MAVSQ7Z434 540 aa7.28□□□□□ -1.24
SSBP1-212ENST00000489378 GJC3Q8NFK1 279 aa7.28□□□□□ -1.24
SSBP1-212ENST00000489378 TAMM41Q96BW9 452 aa7.28□□□□□ -1.24
SSBP1-212ENST00000489378 ISOC1Q96CN7 298 aa7.28□□□□□ -1.24
SSBP1-212ENST00000489378 MISP3Q96FF7 219 aa7.28□□□□□ -1.24
SSBP1-212ENST00000489378 C14orf119Q9NWQ9 140 aa7.28□□□□□ -1.24
SSBP1-212ENST00000489378 RIMS3Q9UJD0 308 aa7.28□□□□□ -1.24
SSBP1-212ENST00000489378 MED31Q9Y3C7 131 aa7.28□□□□□ -1.24
SSBP1-212ENST00000489378 TRBV5-3A0A0A0MS03 114 aa7.27□□□□□ -1.24
SSBP1-212ENST00000489378 SH2D7A6NKC9 451 aaPredicted RBP7.27□□□□□ -1.24
SSBP1-212ENST00000489378 BHLHE40O14503 412 aa7.27□□□□□ -1.24
SSBP1-212ENST00000489378 SIGLEC5O15389 551 aa7.27□□□□□ -1.24
SSBP1-212ENST00000489378 KHDRBS3O75525 346 aaKnown RBP7.27□□□□□ -1.24
SSBP1-212ENST00000489378 SNRNP70P08621 437 aaKnown RBP7.27□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 77.5 ms