RNA–Protein interactions for RNA: ENST00000489352.5

HDAC6-233, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 585 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-233ENST00000489352 GLB1L2Q8IW92 636 aa9.06□□□□□ -0.96
HDAC6-233ENST00000489352 C11orf53Q8IXP5 236 aa9.06□□□□□ -0.96
HDAC6-233ENST00000489352 OR1M1Q8NGA1 313 aa9.06□□□□□ -0.96
HDAC6-233ENST00000489352 PFN4Q8NHR9 129 aa9.06□□□□□ -0.96
HDAC6-233ENST00000489352 MZB1Q8WU39 189 aa9.06□□□□□ -0.96
HDAC6-233ENST00000489352 EME1Q96AY2 570 aa9.06□□□□□ -0.96
HDAC6-233ENST00000489352 NOL4LQ96MY1 436 aaPredicted RBP9.06□□□□□ -0.96
HDAC6-233ENST00000489352 RBM14Q96PK6 669 aaKnown RBP9.06□□□□□ -0.96
HDAC6-233ENST00000489352 RAB3IPQ96QF0 476 aaPredicted RBP9.06□□□□□ -0.96
HDAC6-233ENST00000489352 OR2AT4A6NND4 320 aa9.05□□□□□ -0.96
HDAC6-233ENST00000489352 SAP30O75446 220 aa9.05□□□□□ -0.96
HDAC6-233ENST00000489352 CD247P20963 164 aa9.05□□□□□ -0.96
HDAC6-233ENST00000489352 CENPAP49450 140 aa9.05□□□□□ -0.96
HDAC6-233ENST00000489352 TPTEP56180 551 aa9.05□□□□□ -0.96
HDAC6-233ENST00000489352 SNAPC1Q16533 368 aa9.05□□□□□ -0.96
HDAC6-233ENST00000489352 GTDC1Q4AE62 458 aa9.05□□□□□ -0.96
HDAC6-233ENST00000489352 GCNT6Q5T4J0 391 aa9.05□□□□□ -0.96
HDAC6-233ENST00000489352 MINOS1Q5TGZ0 78 aa9.05□□□□□ -0.96
HDAC6-233ENST00000489352 ZNF626Q68DY1 528 aa9.05□□□□□ -0.96
HDAC6-233ENST00000489352 TEX38Q6PEX7 206 aa9.05□□□□□ -0.96
HDAC6-233ENST00000489352 CFAP77Q6ZQR2 320 aa9.05□□□□□ -0.96
HDAC6-233ENST00000489352 NAA40Q86UY6 237 aa9.05□□□□□ -0.96
HDAC6-233ENST00000489352 SMYD1Q8NB12 490 aa9.05□□□□□ -0.96
HDAC6-233ENST00000489352 OR6T1Q8NGN1 323 aa9.05□□□□□ -0.96
HDAC6-233ENST00000489352 ANGPTL6Q8NI99 470 aa9.05□□□□□ -0.96
HDAC6-233ENST00000489352 PITX2Q99697 317 aa9.05□□□□□ -0.96
HDAC6-233ENST00000489352 ZNF426Q9BUY5 554 aa9.05□□□□□ -0.96
HDAC6-233ENST00000489352 WDR13Q9H1Z4 485 aa9.05□□□□□ -0.96
HDAC6-233ENST00000489352 C1orf21Q9H246 121 aa9.05□□□□□ -0.96
HDAC6-233ENST00000489352 WDR55Q9H6Y2 383 aaPredicted RBP9.05□□□□□ -0.96
HDAC6-233ENST00000489352 ISYNA1Q9NPH2 558 aa9.05□□□□□ -0.96
HDAC6-233ENST00000489352 GRHPRQ9UBQ7 328 aa9.05□□□□□ -0.96
HDAC6-233ENST00000489352 NOL12Q9UGY1 213 aaKnown RBP eCLIP9.05□□□□□ -0.96
HDAC6-233ENST00000489352 MINOS1-NBL1R4GNA1 71 aa9.05□□□□□ -0.96
HDAC6-233ENST00000489352 TEX13CA0A0J9YWL9 993 aa9.04□□□□□ -0.96
HDAC6-233ENST00000489352 ODF3BA8MYP8 253 aa9.04□□□□□ -0.96
HDAC6-233ENST00000489352 PTP4A3O75365 173 aa9.04□□□□□ -0.96
HDAC6-233ENST00000489352 DEDDO75618 318 aa9.04□□□□□ -0.96
HDAC6-233ENST00000489352 CCL3L1P16619 93 aa9.04□□□□□ -0.96
HDAC6-233ENST00000489352 IL12AP29459 219 aa9.04□□□□□ -0.96
HDAC6-233ENST00000489352 CBX1P83916 185 aa9.04□□□□□ -0.96
HDAC6-233ENST00000489352 ZNF92Q03936 586 aa9.04□□□□□ -0.96
HDAC6-233ENST00000489352 HAGHQ16775 308 aa9.04□□□□□ -0.96
HDAC6-233ENST00000489352 CXorf66Q5JRM2 361 aaPredicted RBP9.04□□□□□ -0.96
HDAC6-233ENST00000489352 RNLSQ5VYX0 342 aa9.04□□□□□ -0.96
HDAC6-233ENST00000489352 TMPRSS11FQ6ZWK6 438 aa9.04□□□□□ -0.96
HDAC6-233ENST00000489352 TSEN54Q7Z6J9 526 aaKnown RBP9.04□□□□□ -0.96
HDAC6-233ENST00000489352 C4orf33Q8N1A6 199 aa9.04□□□□□ -0.96
HDAC6-233ENST00000489352 DRAM1Q8N682 238 aa9.04□□□□□ -0.96
HDAC6-233ENST00000489352 OR11H6Q8NGC7 330 aa9.04□□□□□ -0.96
HDAC6-233ENST00000489352 OR4M1Q8NGD0 313 aa9.04□□□□□ -0.96
HDAC6-233ENST00000489352 OR6Q1Q8NGQ2 317 aa9.04□□□□□ -0.96
HDAC6-233ENST00000489352 OR2T27Q8NH04 317 aa9.04□□□□□ -0.96
HDAC6-233ENST00000489352 KRTAP4-5Q9BYR2 181 aa9.04□□□□□ -0.96
HDAC6-233ENST00000489352 PAPOLBQ9NRJ5 636 aaKnown RBP9.04□□□□□ -0.96
HDAC6-233ENST00000489352 NLKQ9UBE8 527 aa9.04□□□□□ -0.96
HDAC6-233ENST00000489352 A4GNTQ9UNA3 340 aa9.04□□□□□ -0.96
HDAC6-233ENST00000489352 COA3Q9Y2R0 106 aaPredicted RBP9.04□□□□□ -0.96
HDAC6-233ENST00000489352 AKR7A2O43488 359 aa9.03□□□□□ -0.96
HDAC6-233ENST00000489352 AHCYL1O43865 530 aa9.03□□□□□ -0.96
HDAC6-233ENST00000489352 SLC16A7O60669 478 aa9.03□□□□□ -0.96
HDAC6-233ENST00000489352 KHDRBS3O75525 346 aaKnown RBP9.03□□□□□ -0.96
HDAC6-233ENST00000489352 LYPD3O95274 346 aa9.03□□□□□ -0.96
HDAC6-233ENST00000489352 TSPAN19P0C672 248 aa9.03□□□□□ -0.96
HDAC6-233ENST00000489352 IGHV1-8P0DP01 117 aa9.03□□□□□ -0.96
HDAC6-233ENST00000489352 BMP2P12643 396 aa9.03□□□□□ -0.96
HDAC6-233ENST00000489352 RBM34P42696 430 aaKnown RBP9.03□□□□□ -0.96
HDAC6-233ENST00000489352 NFYCQ13952 458 aa9.03□□□□□ -0.96
HDAC6-233ENST00000489352 SCARB2Q14108 478 aa9.03□□□□□ -0.96
HDAC6-233ENST00000489352 LDLRAD2Q5SZI1 272 aa9.03□□□□□ -0.96
HDAC6-233ENST00000489352 CORO6Q6QEF8 472 aa9.03□□□□□ -0.96
HDAC6-233ENST00000489352 CALHM1Q8IU99 346 aa9.03□□□□□ -0.96
HDAC6-233ENST00000489352 DPP10Q8N608 796 aa9.03□□□□□ -0.96
HDAC6-233ENST00000489352 OR56B2PQ8NGI1 322 aa9.03□□□□□ -0.96
HDAC6-233ENST00000489352 OR10Z1Q8NGY1 313 aa9.03□□□□□ -0.96
HDAC6-233ENST00000489352 OR2AE1Q8NHA4 323 aa9.03□□□□□ -0.96
HDAC6-233ENST00000489352 GHITMQ9H3K2 345 aa9.03□□□□□ -0.96
HDAC6-233ENST00000489352 PPP1R3EQ9H7J1 279 aa9.03□□□□□ -0.96
HDAC6-233ENST00000489352 SLAMF8Q9P0V8 285 aa9.03□□□□□ -0.96
HDAC6-233ENST00000489352 LINC00527Q9UJ94 153 aa9.03□□□□□ -0.96
HDAC6-233ENST00000489352 MED31Q9Y3C7 131 aa9.03□□□□□ -0.96
HDAC6-233ENST00000489352 CXorf65A6NEN9 183 aa9.02□□□□□ -0.97
HDAC6-233ENST00000489352 CCRL2O00421 344 aa9.02□□□□□ -0.97
HDAC6-233ENST00000489352 IMPA2O14732 288 aa9.02□□□□□ -0.97
HDAC6-233ENST00000489352 AMY1AP04745 511 aa9.02□□□□□ -0.97
HDAC6-233ENST00000489352 AMY2AP04746 511 aa9.02□□□□□ -0.97
HDAC6-233ENST00000489352 RPLP1P05386 114 aaKnown RBP9.02□□□□□ -0.97
HDAC6-233ENST00000489352 OR8U8P0C7N1 319 aa9.02□□□□□ -0.97
HDAC6-233ENST00000489352 GLRA1P23415 457 aa9.02□□□□□ -0.97
HDAC6-233ENST00000489352 DDOSTP39656 456 aa9.02□□□□□ -0.97
HDAC6-233ENST00000489352 CDX1P47902 265 aaPredicted RBP9.02□□□□□ -0.97
HDAC6-233ENST00000489352 SLC7A2P52569 658 aa9.02□□□□□ -0.97
HDAC6-233ENST00000489352 GABPB1Q06547 395 aaPredicted RBP9.02□□□□□ -0.97
HDAC6-233ENST00000489352 TRAP1Q12931 704 aaKnown RBP9.02□□□□□ -0.97
HDAC6-233ENST00000489352 RSPO1Q2MKA7 263 aaPredicted RBP9.02□□□□□ -0.97
HDAC6-233ENST00000489352 NANOGP8Q6NSW7 305 aa9.02□□□□□ -0.97
HDAC6-233ENST00000489352 PGM2L1Q6PCE3 622 aa9.02□□□□□ -0.97
HDAC6-233ENST00000489352 SLC2A7Q6PXP3 512 aa9.02□□□□□ -0.97
HDAC6-233ENST00000489352 BLOC1S3Q6QNY0 202 aa9.02□□□□□ -0.97
HDAC6-233ENST00000489352 WDR86Q86TI4 376 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms