RNA–Protein interactions for RNA: ENST00000487604.1

RBM39-234, Transcript of RNA binding motif protein 39, humanhuman

TSL 3

Gene RBM39, Length 370 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-234ENST00000487604 IQCKQ8N0W5 287 aa0.57□□□□□ -2.32
RBM39-234ENST00000487604 DNAAF3Q8N9W5 541 aa0.57□□□□□ -2.32
RBM39-234ENST00000487604 SLC25A44Q96H78 314 aaPredicted RBP0.57□□□□□ -2.32
RBM39-234ENST00000487604 SLC39A1Q9NY26 324 aa0.57□□□□□ -2.32
RBM39-234ENST00000487604 PSMC3IPQ9P2W1 217 aaPredicted RBP0.57□□□□□ -2.32
RBM39-234ENST00000487604 STX18Q9P2W9 335 aaKnown RBP0.57□□□□□ -2.32
RBM39-234ENST00000487604 LOC102724200A0A096LPH7 203 aaPredicted RBP0.56□□□□□ -2.32
RBM39-234ENST00000487604 A0A0A6YYD5 115 aa0.56□□□□□ -2.32
RBM39-234ENST00000487604 FAM240BA0A1B0GVZ2 78 aa0.56□□□□□ -2.32
RBM39-234ENST00000487604 IGKV2-29A2NJV5 120 aaPredicted RBP0.56□□□□□ -2.32
RBM39-234ENST00000487604 SMCO2A6NFE2 343 aa0.56□□□□□ -2.32
RBM39-234ENST00000487604 TRBV12-3P01733 135 aa0.56□□□□□ -2.32
RBM39-234ENST00000487604 IGHV3-53P01767 116 aa0.56□□□□□ -2.32
RBM39-234ENST00000487604 PGA4P0DJD7 388 aa0.56□□□□□ -2.32
RBM39-234ENST00000487604 PGA3P0DJD8 388 aa0.56□□□□□ -2.32
RBM39-234ENST00000487604 PFN2P35080 140 aa0.56□□□□□ -2.32
RBM39-234ENST00000487604 APLNRP35414 380 aa0.56□□□□□ -2.32
RBM39-234ENST00000487604 CHIT1Q13231 466 aa0.56□□□□□ -2.32
RBM39-234ENST00000487604 MRPL2Q5T653 305 aaKnown RBP0.56□□□□□ -2.32
RBM39-234ENST00000487604 ZNF322Q6U7Q0 402 aaPredicted RBP0.56□□□□□ -2.32
RBM39-234ENST00000487604 CMC1Q7Z7K0 106 aa0.56□□□□□ -2.32
RBM39-234ENST00000487604 COMTD1Q86VU5 262 aa0.56□□□□□ -2.32
RBM39-234ENST00000487604 LRRC8AQ8IWT6 810 aa0.56□□□□□ -2.32
RBM39-234ENST00000487604 ITLN2Q8WWU7 325 aaPredicted RBP0.56□□□□□ -2.32
RBM39-234ENST00000487604 PEBP4Q96S96 227 aa0.56□□□□□ -2.32
RBM39-234ENST00000487604 ILKAPQ9H0C8 392 aaPredicted RBP0.56□□□□□ -2.32
RBM39-234ENST00000487604 CES1P1Q9UKY3 287 aa0.56□□□□□ -2.32
RBM39-234ENST00000487604 HPRT1P00492 218 aa0.55□□□□□ -2.32
RBM39-234ENST00000487604 ANGP03950 147 aaKnown RBP0.55□□□□□ -2.32
RBM39-234ENST00000487604 USF1P22415 310 aaPredicted RBP0.55□□□□□ -2.32
RBM39-234ENST00000487604 GGT2P36268 569 aa0.55□□□□□ -2.32
RBM39-234ENST00000487604 SLC1A1P43005 524 aa0.55□□□□□ -2.32
RBM39-234ENST00000487604 PRB3Q04118 309 aaPredicted RBP0.55□□□□□ -2.32
RBM39-234ENST00000487604 BST1Q10588 318 aa0.55□□□□□ -2.32
RBM39-234ENST00000487604 TRAM2Q15035 370 aa0.55□□□□□ -2.32
RBM39-234ENST00000487604 RUFY3Q7L099 469 aa0.55□□□□□ -2.32
RBM39-234ENST00000487604 BPIFCQ8NFQ6 507 aa0.55□□□□□ -2.32
RBM39-234ENST00000487604 CR1P17927 2039 aa0.54□□□□□ -2.32
RBM39-234ENST00000487604 IGKV1D-43A0A0B4J1Z2 117 aa0.54□□□□□ -2.32
RBM39-234ENST00000487604 GABRPO00591 440 aa0.54□□□□□ -2.32
RBM39-234ENST00000487604 MYL9P24844 172 aa0.54□□□□□ -2.32
RBM39-234ENST00000487604 OR1E1P30953 314 aa0.54□□□□□ -2.32
RBM39-234ENST00000487604 MYCNOSP40205 109 aa0.54□□□□□ -2.32
RBM39-234ENST00000487604 IFNAR2P48551 515 aa0.54□□□□□ -2.32
RBM39-234ENST00000487604 LGALSLQ3ZCW2 172 aaPredicted RBP0.54□□□□□ -2.32
RBM39-234ENST00000487604 C6orf99Q4VX62 202 aa0.54□□□□□ -2.32
RBM39-234ENST00000487604 METAP1DQ6UB28 335 aaPredicted RBP0.54□□□□□ -2.32
RBM39-234ENST00000487604 TMEM107Q6UX40 140 aa0.54□□□□□ -2.32
RBM39-234ENST00000487604 LYPD6Q86Y78 171 aa0.54□□□□□ -2.32
RBM39-234ENST00000487604 KCNG3Q8TAE7 436 aa0.54□□□□□ -2.32
RBM39-234ENST00000487604 DDX19BQ9UMR2 479 aa0.54□□□□□ -2.32
RBM39-234ENST00000487604 G3V3Q6 166 aa0.53□□□□□ -2.32
RBM39-234ENST00000487604 CDH16O75309 829 aa0.53□□□□□ -2.32
RBM39-234ENST00000487604 GUCA1CO95843 209 aa0.53□□□□□ -2.32
RBM39-234ENST00000487604 ZNF24P17028 368 aa0.53□□□□□ -2.32
RBM39-234ENST00000487604 TNNI1P19237 187 aa0.53□□□□□ -2.32
RBM39-234ENST00000487604 IL3RAP26951 378 aa0.53□□□□□ -2.32
RBM39-234ENST00000487604 PBLDP30039 288 aaPredicted RBP0.53□□□□□ -2.32
RBM39-234ENST00000487604 RGS6P49758 472 aa0.53□□□□□ -2.32
RBM39-234ENST00000487604 RPL23AP62750 156 aaKnown RBP0.53□□□□□ -2.32
RBM39-234ENST00000487604 IL24Q13007 206 aa0.53□□□□□ -2.32
RBM39-234ENST00000487604 GPM6BQ13491 265 aa0.53□□□□□ -2.32
RBM39-234ENST00000487604 REEP3Q6NUK4 255 aa0.53□□□□□ -2.32
RBM39-234ENST00000487604 PDPNQ86YL7 162 aa0.53□□□□□ -2.32
RBM39-234ENST00000487604 RPRMLQ8N4K4 120 aa0.53□□□□□ -2.32
RBM39-234ENST00000487604 OR10W1Q8NGF6 305 aa0.53□□□□□ -2.32
RBM39-234ENST00000487604 TXNDC17Q9BRA2 123 aa0.53□□□□□ -2.32
RBM39-234ENST00000487604 TUBA4BQ9H853 241 aa0.53□□□□□ -2.32
RBM39-234ENST00000487604 ZNF286AQ9HBT8 521 aa0.53□□□□□ -2.32
RBM39-234ENST00000487604 SND1-IT1Q9HBX3 110 aa0.53□□□□□ -2.32
RBM39-234ENST00000487604 ADGRB3O60242 1522 aa0.53□□□□□ -2.33
RBM39-234ENST00000487604 TMEM72A0PK05 275 aa0.52□□□□□ -2.33
RBM39-234ENST00000487604 IGLL5B9A064 214 aa0.52□□□□□ -2.33
RBM39-234ENST00000487604 C9JVG2 144 aa0.52□□□□□ -2.33
RBM39-234ENST00000487604 SLC31A1O15431 190 aa0.52□□□□□ -2.33
RBM39-234ENST00000487604 TNNT2P45379 298 aaPredicted RBP0.52□□□□□ -2.33
RBM39-234ENST00000487604 PRDX4Q13162 271 aa0.52□□□□□ -2.33
RBM39-234ENST00000487604 LRRC23Q53EV4 343 aaPredicted RBP0.52□□□□□ -2.33
RBM39-234ENST00000487604 XKR7Q5GH72 579 aa0.52□□□□□ -2.33
RBM39-234ENST00000487604 HHATQ5VTY9 493 aa0.52□□□□□ -2.33
RBM39-234ENST00000487604 RNASEKQ6P5S7 137 aaKnown RBP0.52□□□□□ -2.33
RBM39-234ENST00000487604 DEFB119Q8N690 84 aa0.52□□□□□ -2.33
RBM39-234ENST00000487604 CAPSLQ8WWF8 208 aa0.52□□□□□ -2.33
RBM39-234ENST00000487604 YIPF6Q96EC8 236 aa0.52□□□□□ -2.33
RBM39-234ENST00000487604 SGTBQ96EQ0 304 aa0.52□□□□□ -2.33
RBM39-234ENST00000487604 DERL3Q96Q80 235 aa0.52□□□□□ -2.33
RBM39-234ENST00000487604 TEAD3Q99594 435 aa0.52□□□□□ -2.33
RBM39-234ENST00000487604 EMC6Q9BV81 110 aa0.52□□□□□ -2.33
RBM39-234ENST00000487604 SFXN3Q9BWM7 321 aa0.52□□□□□ -2.33
RBM39-234ENST00000487604 HYPKQ9NX55 129 aa0.52□□□□□ -2.33
RBM39-234ENST00000487604 PISDQ9UG56 409 aa0.52□□□□□ -2.33
RBM39-234ENST00000487604 ZNF443Q9Y2A4 671 aaPredicted RBP0.52□□□□□ -2.33
RBM39-234ENST00000487604 ACOT9Q9Y305 439 aa0.52□□□□□ -2.33
RBM39-234ENST00000487604 ICOSQ9Y6W8 199 aa0.52□□□□□ -2.33
RBM39-234ENST00000487604 A0A1B0GU33 70 aa0.51□□□□□ -2.33
RBM39-234ENST00000487604 C19orf71A6NCJ1 209 aa0.51□□□□□ -2.33
RBM39-234ENST00000487604 SIRPB1O00241 398 aa0.51□□□□□ -2.33
RBM39-234ENST00000487604 NME4O00746 187 aa0.51□□□□□ -2.33
RBM39-234ENST00000487604 CLOCKO15516 846 aa0.51□□□□□ -2.33
RBM39-234ENST00000487604 PRB4P10163 310 aaPredicted RBP0.51□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms