RNA–Protein interactions for RNA: ENST00000486941.1

SNRNP40-205, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 743 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-205ENST00000486941 PURGQ9UJV8 347 aaKnown RBP3.29□□□□□ -1.88
SNRNP40-205ENST00000486941 ZNF229Q9UJW7 825 aa3.29□□□□□ -1.88
SNRNP40-205ENST00000486941 INSIG2Q9Y5U4 225 aa3.29□□□□□ -1.88
SNRNP40-205ENST00000486941 NPTNQ9Y639 398 aa3.29□□□□□ -1.88
SNRNP40-205ENST00000486941 AUP1Q9Y679 476 aa3.29□□□□□ -1.88
SNRNP40-205ENST00000486941 CACNG2Q9Y698 323 aa3.29□□□□□ -1.88
SNRNP40-205ENST00000486941 LOC100509620A0A075B734 347 aa3.28□□□□□ -1.88
SNRNP40-205ENST00000486941 A0A1B0GUS0 222 aa3.28□□□□□ -1.88
SNRNP40-205ENST00000486941 A0A1W2PRG6 482 aa3.28□□□□□ -1.88
SNRNP40-205ENST00000486941 TMEM120BA0PK00 339 aa3.28□□□□□ -1.88
SNRNP40-205ENST00000486941 ISPDA4D126 451 aa3.28□□□□□ -1.88
SNRNP40-205ENST00000486941 C5orf49A4QMS7 147 aa3.28□□□□□ -1.88
SNRNP40-205ENST00000486941 TRAPPC13A5PLN9 417 aa3.28□□□□□ -1.88
SNRNP40-205ENST00000486941 GMNCA6NCL1 334 aa3.28□□□□□ -1.88
SNRNP40-205ENST00000486941 ZSCAN5BA6NJL1 495 aa3.28□□□□□ -1.88
SNRNP40-205ENST00000486941 PMS2P5A8MQ11 134 aa3.28□□□□□ -1.88
SNRNP40-205ENST00000486941 A8MXK9 166 aa3.28□□□□□ -1.88
SNRNP40-205ENST00000486941 BLOC1S5-TXNDC5H3BN57 136 aa3.28□□□□□ -1.88
SNRNP40-205ENST00000486941 TRAPPC2LH3BP13 241 aa3.28□□□□□ -1.88
SNRNP40-205ENST00000486941 M0QX08 132 aa3.28□□□□□ -1.88
SNRNP40-205ENST00000486941 ERLIN1O75477 346 aa3.28□□□□□ -1.88
SNRNP40-205ENST00000486941 TRMUO75648 421 aaKnown RBP3.28□□□□□ -1.88
SNRNP40-205ENST00000486941 LYPD3O95274 346 aa3.28□□□□□ -1.88
SNRNP40-205ENST00000486941 TGDSO95455 350 aa3.28□□□□□ -1.88
SNRNP40-205ENST00000486941 IGF2P01344 180 aa3.28□□□□□ -1.88
SNRNP40-205ENST00000486941 IGHV2-70P01814 119 aa3.28□□□□□ -1.88
SNRNP40-205ENST00000486941 THY1P04216 161 aa3.28□□□□□ -1.88
SNRNP40-205ENST00000486941 SBK2P0C263 348 aa3.28□□□□□ -1.88
SNRNP40-205ENST00000486941 TSPAN19P0C672 248 aa3.28□□□□□ -1.88
SNRNP40-205ENST00000486941 NR2C1P13056 603 aa3.28□□□□□ -1.88
SNRNP40-205ENST00000486941 ACADSP16219 412 aa3.28□□□□□ -1.88
SNRNP40-205ENST00000486941 ZNF32P17041 273 aa3.28□□□□□ -1.88
SNRNP40-205ENST00000486941 FUT1P19526 365 aa3.28□□□□□ -1.88
SNRNP40-205ENST00000486941 CCNOP22674 350 aa3.28□□□□□ -1.88
SNRNP40-205ENST00000486941 TUBG1P23258 451 aa3.28□□□□□ -1.88
SNRNP40-205ENST00000486941 AQP1P29972 269 aa3.28□□□□□ -1.88
SNRNP40-205ENST00000486941 MPV17P39210 176 aa3.28□□□□□ -1.88
SNRNP40-205ENST00000486941 WNT5AP41221 380 aa3.28□□□□□ -1.88
SNRNP40-205ENST00000486941 GDI2P50395 445 aaKnown RBP3.28□□□□□ -1.88
SNRNP40-205ENST00000486941 ARHGDIAP52565 204 aa3.28□□□□□ -1.88
SNRNP40-205ENST00000486941 UGT2B15P54855 530 aa3.28□□□□□ -1.88
SNRNP40-205ENST00000486941 STX1BP61266 288 aa3.28□□□□□ -1.88
SNRNP40-205ENST00000486941 PPP1CBP62140 327 aa3.28□□□□□ -1.88
SNRNP40-205ENST00000486941 PSG4Q00888 419 aa3.28□□□□□ -1.88
SNRNP40-205ENST00000486941 GLO1Q04760 184 aa3.28□□□□□ -1.88
SNRNP40-205ENST00000486941 PAX8Q06710 450 aa3.28□□□□□ -1.88
SNRNP40-205ENST00000486941 RPL18Q07020 188 aaKnown RBP3.28□□□□□ -1.88
SNRNP40-205ENST00000486941 BAMBIQ13145 260 aa3.28□□□□□ -1.88
SNRNP40-205ENST00000486941 MELKQ14680 651 aa3.28□□□□□ -1.88
SNRNP40-205ENST00000486941 TAF11Q15544 211 aa3.28□□□□□ -1.88
SNRNP40-205ENST00000486941 SLC9A3R2Q15599 337 aa3.28□□□□□ -1.88
SNRNP40-205ENST00000486941 NPTX1Q15818 432 aa3.28□□□□□ -1.88
SNRNP40-205ENST00000486941 SGCAQ16586 387 aa3.28□□□□□ -1.88
SNRNP40-205ENST00000486941 DUSP7Q16829 419 aa3.28□□□□□ -1.88
SNRNP40-205ENST00000486941 ARMCX4Q5H9R4 360 aa3.28□□□□□ -1.88
SNRNP40-205ENST00000486941 TMEM255AQ5JRV8 349 aa3.28□□□□□ -1.88
SNRNP40-205ENST00000486941 KLF17Q5JT82 389 aaPredicted RBP3.28□□□□□ -1.88
SNRNP40-205ENST00000486941 PAGE3Q5JUK9 113 aa3.28□□□□□ -1.88
SNRNP40-205ENST00000486941 THEM4Q5T1C6 240 aa3.28□□□□□ -1.88
SNRNP40-205ENST00000486941 LEG1Q6P5S2 330 aa3.28□□□□□ -1.88
SNRNP40-205ENST00000486941 SLC25A47Q6Q0C1 308 aa3.28□□□□□ -1.88
SNRNP40-205ENST00000486941 DLEU7Q6UYE1 221 aa3.28□□□□□ -1.88
SNRNP40-205ENST00000486941 ZER1Q7Z7L7 766 aa3.28□□□□□ -1.88
SNRNP40-205ENST00000486941 LRRC28Q86X40 367 aaPredicted RBP3.28□□□□□ -1.88
SNRNP40-205ENST00000486941 ZNF101Q8IZC7 436 aa3.28□□□□□ -1.88
SNRNP40-205ENST00000486941 LRRC18Q8N456 261 aa3.28□□□□□ -1.88
SNRNP40-205ENST00000486941 SPICQ8N5J4 248 aa3.28□□□□□ -1.88
SNRNP40-205ENST00000486941 ZNF283Q8N7M2 679 aa3.28□□□□□ -1.88
SNRNP40-205ENST00000486941 ANKRD42Q8N9B4 389 aa3.28□□□□□ -1.88
SNRNP40-205ENST00000486941 SMYD1Q8NB12 490 aa3.28□□□□□ -1.88
SNRNP40-205ENST00000486941 C11orf65Q8NCR3 313 aa3.28□□□□□ -1.88
SNRNP40-205ENST00000486941 ICA1LQ8NDH6 482 aa3.28□□□□□ -1.88
SNRNP40-205ENST00000486941 NOXO1Q8NFA2 376 aa3.28□□□□□ -1.88
SNRNP40-205ENST00000486941 OR2AK2Q8NG84 335 aa3.28□□□□□ -1.88
SNRNP40-205ENST00000486941 GPR32P1Q8NGA4 272 aa3.28□□□□□ -1.88
SNRNP40-205ENST00000486941 OR6T1Q8NGN1 323 aa3.28□□□□□ -1.88
SNRNP40-205ENST00000486941 SLC25A40Q8TBP6 338 aa3.28□□□□□ -1.88
SNRNP40-205ENST00000486941 FNDC8Q8TC99 324 aa3.28□□□□□ -1.88
SNRNP40-205ENST00000486941 ADAMTS16Q8TE57 1224 aa3.28□□□□□ -1.88
SNRNP40-205ENST00000486941 LIPHQ8WWY8 451 aa3.28□□□□□ -1.88
SNRNP40-205ENST00000486941 RAB40AQ8WXH6 277 aa3.28□□□□□ -1.88
SNRNP40-205ENST00000486941 GTF3AQ92664 365 aaKnown RBP3.28□□□□□ -1.88
SNRNP40-205ENST00000486941 NABP1Q96AH0 204 aa3.28□□□□□ -1.88
SNRNP40-205ENST00000486941 LGALS12Q96DT0 336 aa3.28□□□□□ -1.88
SNRNP40-205ENST00000486941 SPDL1Q96EA4 605 aa3.28□□□□□ -1.88
SNRNP40-205ENST00000486941 SAMD8Q96LT4 415 aa3.28□□□□□ -1.88
SNRNP40-205ENST00000486941 C1orf147Q96MC9 270 aaPredicted RBP3.28□□□□□ -1.88
SNRNP40-205ENST00000486941 RBP7Q96R05 134 aa3.28□□□□□ -1.88
SNRNP40-205ENST00000486941 PRSS27Q9BQR3 290 aa3.28□□□□□ -1.88
SNRNP40-205ENST00000486941 CCDC28BQ9BUN5 200 aa3.28□□□□□ -1.88
SNRNP40-205ENST00000486941 OR2J1Q9GZK6 312 aa3.28□□□□□ -1.88
SNRNP40-205ENST00000486941 CENPHQ9H3R5 247 aa3.28□□□□□ -1.88
SNRNP40-205ENST00000486941 IKZF5Q9H5V7 419 aa3.28□□□□□ -1.88
SNRNP40-205ENST00000486941 ELOVL3Q9HB03 270 aa3.28□□□□□ -1.88
SNRNP40-205ENST00000486941 CCNB1IP1Q9NPC3 277 aa3.28□□□□□ -1.88
SNRNP40-205ENST00000486941 MEPEQ9NQ76 525 aaPredicted RBP3.28□□□□□ -1.88
SNRNP40-205ENST00000486941 MMP26Q9NRE1 261 aa3.28□□□□□ -1.88
SNRNP40-205ENST00000486941 TUBG2Q9NRH3 451 aa3.28□□□□□ -1.88
SNRNP40-205ENST00000486941 INIPQ9NRY2 104 aa3.28□□□□□ -1.88
SNRNP40-205ENST00000486941 TMEM106BQ9NUM4 274 aa3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 112.1 ms