RNA–Protein interactions for RNA: ENST00000485479.5

APTX-227, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,986 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-227ENST00000485479 MOB1AQ9H8S9 216 aa10.05□□□□□ -0.8
APTX-227ENST00000485479 SP140LQ9H930 580 aa10.05□□□□□ -0.8
APTX-227ENST00000485479 INPP5EQ9NRR6 644 aa10.05□□□□□ -0.8
APTX-227ENST00000485479 CYSLTR2Q9NS75 346 aa10.05□□□□□ -0.8
APTX-227ENST00000485479 CNOT2Q9NZN8 540 aaKnown RBP10.05□□□□□ -0.8
APTX-227ENST00000485479 ZDHHC8Q9ULC8 765 aa10.05□□□□□ -0.8
APTX-227ENST00000485479 EXOSC1Q9Y3B2 195 aaKnown RBP10.05□□□□□ -0.8
APTX-227ENST00000485479 MED13LQ71F56 2210 aa10.05□□□□□ -0.8
APTX-227ENST00000485479 LRP5LA4QPB2 252 aa10.05□□□□□ -0.8
APTX-227ENST00000485479 ANKRD30BLA7E2S9 258 aa10.05□□□□□ -0.8
APTX-227ENST00000485479 MYL12BO14950 172 aa10.05□□□□□ -0.8
APTX-227ENST00000485479 SYT7O43581 403 aa10.05□□□□□ -0.8
APTX-227ENST00000485479 DHRS3O75911 302 aa10.05□□□□□ -0.8
APTX-227ENST00000485479 CYB5R3P00387 301 aaPredicted RBP10.05□□□□□ -0.8
APTX-227ENST00000485479 EEF1B2P24534 225 aaKnown RBP10.05□□□□□ -0.8
APTX-227ENST00000485479 MAP2K4P45985 399 aa10.05□□□□□ -0.8
APTX-227ENST00000485479 GMFBP60983 142 aa10.05□□□□□ -0.8
APTX-227ENST00000485479 PRDX4Q13162 271 aa10.05□□□□□ -0.8
APTX-227ENST00000485479 ALKBH1Q13686 389 aaKnown RBP10.05□□□□□ -0.8
APTX-227ENST00000485479 ZMAT1Q5H9K5 638 aa10.05□□□□□ -0.8
APTX-227ENST00000485479 SHEQ5VZ18 495 aa10.05□□□□□ -0.8
APTX-227ENST00000485479 DNM1P46Q6ZS02 220 aa10.05□□□□□ -0.8
APTX-227ENST00000485479 SYS1Q8N2H4 156 aa10.05□□□□□ -0.8
APTX-227ENST00000485479 SEMA6DQ8NFY4 1073 aa10.05□□□□□ -0.8
APTX-227ENST00000485479 OR8S1Q8NH09 359 aa10.05□□□□□ -0.8
APTX-227ENST00000485479 C10orf105Q8TEF2 133 aa10.05□□□□□ -0.8
APTX-227ENST00000485479 HPSE2Q8WWQ2 592 aa10.05□□□□□ -0.8
APTX-227ENST00000485479 ORAI1Q96D31 301 aa10.05□□□□□ -0.8
APTX-227ENST00000485479 OR5M11Q96RB7 305 aa10.05□□□□□ -0.8
APTX-227ENST00000485479 JAM3Q9BX67 310 aa10.05□□□□□ -0.8
APTX-227ENST00000485479 RGCCQ9H4X1 137 aa10.05□□□□□ -0.8
APTX-227ENST00000485479 BARX1Q9HBU1 254 aaPredicted RBP10.05□□□□□ -0.8
APTX-227ENST00000485479 GPR173Q9NS66 373 aa10.05□□□□□ -0.8
APTX-227ENST00000485479 SCN3BQ9NY72 215 aa10.05□□□□□ -0.8
APTX-227ENST00000485479 MRPL15Q9P015 296 aaKnown RBP10.05□□□□□ -0.8
APTX-227ENST00000485479 TANC2Q9HCD6 1990 aa10.04□□□□□ -0.8
APTX-227ENST00000485479 F8P00451 2351 aa10.04□□□□□ -0.8
APTX-227ENST00000485479 TRBV2A0A0J9YWF9 115 aa10.04□□□□□ -0.8
APTX-227ENST00000485479 A0A1B0GVI7 797 aa10.04□□□□□ -0.8
APTX-227ENST00000485479 OR4C45A6NMZ5 311 aa10.04□□□□□ -0.8
APTX-227ENST00000485479 RP2O75695 350 aa10.04□□□□□ -0.8
APTX-227ENST00000485479 THBS2P35442 1172 aa10.04□□□□□ -0.8
APTX-227ENST00000485479 LIPAP38571 399 aa10.04□□□□□ -0.8
APTX-227ENST00000485479 PMELP40967 661 aa10.04□□□□□ -0.8
APTX-227ENST00000485479 GBX2P52951 348 aaPredicted RBP10.04□□□□□ -0.8
APTX-227ENST00000485479 CDH15P55291 814 aa10.04□□□□□ -0.8
APTX-227ENST00000485479 SLC3A1Q07837 685 aa10.04□□□□□ -0.8
APTX-227ENST00000485479 PCGF3Q3KNV8 242 aa10.04□□□□□ -0.8
APTX-227ENST00000485479 FAM209AQ5JX71 171 aa10.04□□□□□ -0.8
APTX-227ENST00000485479 BATF2Q8N1L9 274 aa10.04□□□□□ -0.8
APTX-227ENST00000485479 ZNF676Q8N7Q3 588 aa10.04□□□□□ -0.8
APTX-227ENST00000485479 ZNF485Q8NCK3 441 aa10.04□□□□□ -0.8
APTX-227ENST00000485479 OR14K1Q8NGZ2 314 aa10.04□□□□□ -0.8
APTX-227ENST00000485479 TRMT10AQ8TBZ6 339 aaKnown RBP10.04□□□□□ -0.8
APTX-227ENST00000485479 RGP1Q92546 391 aaPredicted RBP10.04□□□□□ -0.8
APTX-227ENST00000485479 GCM1Q9NP62 436 aa10.04□□□□□ -0.8
APTX-227ENST00000485479 CHCHD3Q9NX63 227 aaKnown RBP10.04□□□□□ -0.8
APTX-227ENST00000485479 CGGBP1Q9UFW8 167 aaPredicted RBP10.04□□□□□ -0.8
APTX-227ENST00000485479 PPP1R3CQ9UQK1 317 aa10.04□□□□□ -0.8
APTX-227ENST00000485479 CAB39Q9Y376 341 aaPredicted RBP10.04□□□□□ -0.8
APTX-227ENST00000485479 IGHV4-61A0A0C4DH41 118 aa10.03□□□□□ -0.8
APTX-227ENST00000485479 IRGMA1A4Y4 181 aa10.03□□□□□ -0.8
APTX-227ENST00000485479 ANKRD61A6NGH8 418 aa10.03□□□□□ -0.8
APTX-227ENST00000485479 PPIHO43447 177 aaKnown RBP10.03□□□□□ -0.8
APTX-227ENST00000485479 DENRO43583 198 aaKnown RBP10.03□□□□□ -0.8
APTX-227ENST00000485479 TNFSF4P23510 183 aa10.03□□□□□ -0.8
APTX-227ENST00000485479 CFL1P23528 166 aaKnown RBP10.03□□□□□ -0.8
APTX-227ENST00000485479 IL2RGP31785 369 aa10.03□□□□□ -0.8
APTX-227ENST00000485479 GNALP38405 381 aa10.03□□□□□ -0.8
APTX-227ENST00000485479 MAP2K3P46734 347 aa10.03□□□□□ -0.8
APTX-227ENST00000485479 PDLIM4P50479 330 aa10.03□□□□□ -0.8
APTX-227ENST00000485479 GPM6AP51674 278 aa10.03□□□□□ -0.8
APTX-227ENST00000485479 TMPRSS11AQ6ZMR5 421 aa10.03□□□□□ -0.8
APTX-227ENST00000485479 KCTD8Q6ZWB6 473 aa10.03□□□□□ -0.8
APTX-227ENST00000485479 KCTD20Q7Z5Y7 419 aa10.03□□□□□ -0.8
APTX-227ENST00000485479 BOLLQ8N9W6 283 aaKnown RBP10.03□□□□□ -0.8
APTX-227ENST00000485479 RDH5Q92781 318 aa10.03□□□□□ -0.8
APTX-227ENST00000485479 ITPKCQ96DU7 683 aa10.03□□□□□ -0.8
APTX-227ENST00000485479 ADAT3Q96EY9 351 aaPredicted RBP10.03□□□□□ -0.8
APTX-227ENST00000485479 NKX3-1Q99801 234 aaPredicted RBP10.03□□□□□ -0.8
APTX-227ENST00000485479 OPA3Q9H6K4 179 aa10.03□□□□□ -0.8
APTX-227ENST00000485479 METTL17Q9H7H0 456 aaPredicted RBP10.03□□□□□ -0.8
APTX-227ENST00000485479 PLEKHA1Q9HB21 404 aa10.03□□□□□ -0.8
APTX-227ENST00000485479 ZFHX3Q15911 3703 aa10.03□□□□□ -0.8
APTX-227ENST00000485479 ZNF816-ZNF321PA0A0X1KG74 233 aa10.03□□□□□ -0.8
APTX-227ENST00000485479 A6NLC8 198 aa10.03□□□□□ -0.8
APTX-227ENST00000485479 INMTO95050 263 aa10.03□□□□□ -0.8
APTX-227ENST00000485479 CD55P08174 381 aa10.03□□□□□ -0.8
APTX-227ENST00000485479 ADH4P08319 380 aa10.03□□□□□ -0.8
APTX-227ENST00000485479 CRYBB2P43320 205 aa10.03□□□□□ -0.8
APTX-227ENST00000485479 SOX2P48431 317 aa10.03□□□□□ -0.8
APTX-227ENST00000485479 RIPPLY1Q0D2K3 151 aa10.03□□□□□ -0.8
APTX-227ENST00000485479 CDK5R1Q15078 307 aa10.03□□□□□ -0.8
APTX-227ENST00000485479 MED22Q15528 200 aa10.03□□□□□ -0.8
APTX-227ENST00000485479 PLCXD3Q63HM9 321 aa10.03□□□□□ -0.8
APTX-227ENST00000485479 MOB3CQ70IA8 216 aa10.03□□□□□ -0.8
APTX-227ENST00000485479 MRPL48Q96GC5 212 aaKnown RBP10.03□□□□□ -0.8
APTX-227ENST00000485479 EGLN1Q9GZT9 426 aa10.03□□□□□ -0.8
APTX-227ENST00000485479 Q9H521 79 aa10.03□□□□□ -0.8
APTX-227ENST00000485479 NKIRAS2Q9NYR9 191 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms