RNA–Protein interactions for RNA: ENST00000484596.1

UBR3-210, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 2

Gene UBR3, Length 791 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-210ENST00000484596 TMEM38AQ9H6F2 299 aa4.46□□□□□ -1.7
UBR3-210ENST00000484596 SLCO1B3Q9NPD5 702 aa4.46□□□□□ -1.7
UBR3-210ENST00000484596 CLN6Q9NWW5 311 aa4.46□□□□□ -1.7
UBR3-210ENST00000484596 CD300AQ9UGN4 299 aa4.46□□□□□ -1.7
UBR3-210ENST00000484596 ST3GAL6Q9Y274 331 aa4.46□□□□□ -1.7
UBR3-210ENST00000484596 YARS2Q9Y2Z4 477 aaKnown RBP4.46□□□□□ -1.7
UBR3-210ENST00000484596 MYO15AQ9UKN7 3530 aa4.46□□□□□ -1.7
UBR3-210ENST00000484596 USP34Q70CQ2 3546 aa4.45□□□□□ -1.7
UBR3-210ENST00000484596 PINLYPA6NC86 204 aa4.45□□□□□ -1.7
UBR3-210ENST00000484596 NDUFS6O75380 124 aaKnown RBP4.45□□□□□ -1.7
UBR3-210ENST00000484596 HSBP1O75506 76 aa4.45□□□□□ -1.7
UBR3-210ENST00000484596 FARS2O95363 451 aaKnown RBP4.45□□□□□ -1.7
UBR3-210ENST00000484596 SMIM10L1P0DMW3 83 aa4.45□□□□□ -1.7
UBR3-210ENST00000484596 RFC3P40938 356 aa4.45□□□□□ -1.7
UBR3-210ENST00000484596 STK38Q15208 465 aa4.45□□□□□ -1.7
UBR3-210ENST00000484596 ZSCAN26Q16670 478 aa4.45□□□□□ -1.7
UBR3-210ENST00000484596 TMEM104Q8NE00 496 aa4.45□□□□□ -1.7
UBR3-210ENST00000484596 CDC26Q8NHZ8 85 aa4.45□□□□□ -1.7
UBR3-210ENST00000484596 CDKL2Q92772 493 aa4.45□□□□□ -1.7
UBR3-210ENST00000484596 RAB1CQ92928 201 aa4.45□□□□□ -1.7
UBR3-210ENST00000484596 APH1AQ96BI3 265 aa4.45□□□□□ -1.7
UBR3-210ENST00000484596 SMIM10Q96HG1 83 aa4.45□□□□□ -1.7
UBR3-210ENST00000484596 ALS2CR12Q96Q35 445 aa4.45□□□□□ -1.7
UBR3-210ENST00000484596 MICU1Q9BPX6 476 aa4.45□□□□□ -1.7
UBR3-210ENST00000484596 VCX3BQ9H321 246 aa4.45□□□□□ -1.7
UBR3-210ENST00000484596 MMP26Q9NRE1 261 aa4.45□□□□□ -1.7
UBR3-210ENST00000484596 SLC25A37Q9NYZ2 338 aa4.45□□□□□ -1.7
UBR3-210ENST00000484596 CTSFQ9UBX1 484 aa4.45□□□□□ -1.7
UBR3-210ENST00000484596 ZNF629Q9UEG4 869 aaPredicted RBP4.45□□□□□ -1.7
UBR3-210ENST00000484596 DDX19BQ9UMR2 479 aa4.45□□□□□ -1.7
UBR3-210ENST00000484596 SLC22A14Q9Y267 594 aa4.45□□□□□ -1.7
UBR3-210ENST00000484596 TRAPPC4Q9Y296 219 aa4.45□□□□□ -1.7
UBR3-210ENST00000484596 ATP6V1DQ9Y5K8 247 aa4.45□□□□□ -1.7
UBR3-210ENST00000484596 LRRC37A2A6NM11 1700 aa4.45□□□□□ -1.7
UBR3-210ENST00000484596 BDP1A6H8Y1 2624 aa4.44□□□□□ -1.7
UBR3-210ENST00000484596 TDRD6O60522 2096 aaKnown RBP4.44□□□□□ -1.7
UBR3-210ENST00000484596 CIB4A0PJX0 185 aa4.44□□□□□ -1.7
UBR3-210ENST00000484596 CRISP2P16562 243 aa4.44□□□□□ -1.7
UBR3-210ENST00000484596 CTRLP40313 264 aa4.44□□□□□ -1.7
UBR3-210ENST00000484596 NCBP2P52298 156 aaKnown RBP eCLIP4.44□□□□□ -1.7
UBR3-210ENST00000484596 LCN2P80188 198 aa4.44□□□□□ -1.7
UBR3-210ENST00000484596 UBE2UQ5VVX9 321 aa4.44□□□□□ -1.7
UBR3-210ENST00000484596 MLIPQ5VWP3 458 aa4.44□□□□□ -1.7
UBR3-210ENST00000484596 COX15Q7KZN9 410 aa4.44□□□□□ -1.7
UBR3-210ENST00000484596 ZNF547Q8IVP9 402 aa4.44□□□□□ -1.7
UBR3-210ENST00000484596 CD300LFQ8TDQ1 290 aa4.44□□□□□ -1.7
UBR3-210ENST00000484596 IL22RA2Q969J5 263 aa4.44□□□□□ -1.7
UBR3-210ENST00000484596 DNAJC19Q96DA6 116 aa4.44□□□□□ -1.7
UBR3-210ENST00000484596 TSSK3Q96PN8 268 aa4.44□□□□□ -1.7
UBR3-210ENST00000484596 CYTH2Q99418 400 aa4.44□□□□□ -1.7
UBR3-210ENST00000484596 KCNS3Q9BQ31 491 aa4.44□□□□□ -1.7
UBR3-210ENST00000484596 MRM3Q9HC36 420 aaKnown RBP4.44□□□□□ -1.7
UBR3-210ENST00000484596 TMEM9BQ9NQ34 198 aa4.44□□□□□ -1.7
UBR3-210ENST00000484596 PCYOX1Q9UHG3 505 aa4.44□□□□□ -1.7
UBR3-210ENST00000484596 NUFIP1Q9UHK0 495 aaKnown RBP4.44□□□□□ -1.7
UBR3-210ENST00000484596 F11RQ9Y624 299 aaKnown RBP4.44□□□□□ -1.7
UBR3-210ENST00000484596 MRPS18BQ9Y676 258 aaKnown RBP4.44□□□□□ -1.7
UBR3-210ENST00000484596 BZW2Q9Y6E2 419 aaKnown RBP4.44□□□□□ -1.7
UBR3-210ENST00000484596 PTPRSQ13332 1948 aa4.44□□□□□ -1.7
UBR3-210ENST00000484596 PRRC2AP48634 2157 aaKnown RBP4.43□□□□□ -1.7
UBR3-210ENST00000484596 MYH4Q9Y623 1939 aa4.43□□□□□ -1.7
UBR3-210ENST00000484596 TTC28Q96AY4 2481 aa4.43□□□□□ -1.7
UBR3-210ENST00000484596 PRSS37A4D1T9 235 aa4.43□□□□□ -1.7
UBR3-210ENST00000484596 KMOO15229 486 aa4.43□□□□□ -1.7
UBR3-210ENST00000484596 RAD51CO43502 376 aa4.43□□□□□ -1.7
UBR3-210ENST00000484596 XRCC2O43543 280 aa4.43□□□□□ -1.7
UBR3-210ENST00000484596 ZNF861PO60384 105 aa4.43□□□□□ -1.7
UBR3-210ENST00000484596 AQP8O94778 261 aa4.43□□□□□ -1.7
UBR3-210ENST00000484596 INSP01308 110 aa4.43□□□□□ -1.7
UBR3-210ENST00000484596 F2RP25116 425 aa4.43□□□□□ -1.7
UBR3-210ENST00000484596 ADORA1P30542 326 aa4.43□□□□□ -1.7
UBR3-210ENST00000484596 HOXA6P31267 233 aa4.43□□□□□ -1.7
UBR3-210ENST00000484596 EVI2BP34910 448 aa4.43□□□□□ -1.7
UBR3-210ENST00000484596 RND2P52198 227 aa4.43□□□□□ -1.7
UBR3-210ENST00000484596 GPR176Q14439 515 aa4.43□□□□□ -1.7
UBR3-210ENST00000484596 PON3Q15166 354 aa4.43□□□□□ -1.7
UBR3-210ENST00000484596 GABRA6Q16445 453 aa4.43□□□□□ -1.7
UBR3-210ENST00000484596 RPEL1Q2QD12 228 aa4.43□□□□□ -1.7
UBR3-210ENST00000484596 FKBP1CQ5VVH2 108 aa4.43□□□□□ -1.7
UBR3-210ENST00000484596 SLC25A25Q6KCM7 469 aa4.43□□□□□ -1.7
UBR3-210ENST00000484596 TEX43Q6ZNM6 134 aa4.43□□□□□ -1.7
UBR3-210ENST00000484596 ZNF621Q6ZSS3 439 aa4.43□□□□□ -1.7
UBR3-210ENST00000484596 DNAAF3Q8N9W5 541 aa4.43□□□□□ -1.7
UBR3-210ENST00000484596 NDNFQ8TB73 568 aa4.43□□□□□ -1.7
UBR3-210ENST00000484596 LRRC58Q96CX6 371 aa4.43□□□□□ -1.7
UBR3-210ENST00000484596 OR2M2Q96R28 347 aa4.43□□□□□ -1.7
UBR3-210ENST00000484596 NRTNQ99748 197 aa4.43□□□□□ -1.7
UBR3-210ENST00000484596 ACBD6Q9BR61 282 aa4.43□□□□□ -1.7
UBR3-210ENST00000484596 PRSS16Q9NQE7 514 aa4.43□□□□□ -1.7
UBR3-210ENST00000484596 HMGXB4Q9UGU5 601 aa4.43□□□□□ -1.7
UBR3-210ENST00000484596 PRELID1Q9Y255 219 aa4.43□□□□□ -1.7
UBR3-210ENST00000484596 CBY1Q9Y3M2 126 aa4.43□□□□□ -1.7
UBR3-210ENST00000484596 KCNE3Q9Y6H6 103 aa4.43□□□□□ -1.7
UBR3-210ENST00000484596 K7EMT4 169 aa4.42□□□□□ -1.7
UBR3-210ENST00000484596 PLPP1O14494 284 aa4.42□□□□□ -1.7
UBR3-210ENST00000484596 POLR1CO15160 346 aaPredicted RBP4.42□□□□□ -1.7
UBR3-210ENST00000484596 CDK14O94921 469 aa4.42□□□□□ -1.7
UBR3-210ENST00000484596 APOA1P02647 267 aa4.42□□□□□ -1.7
UBR3-210ENST00000484596 BGLAPP02818 100 aa4.42□□□□□ -1.7
UBR3-210ENST00000484596 ZNF30P17039 623 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms