RNA–Protein interactions for RNA: ENST00000484581.6

VPS13A-211, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 2 BASIC

Gene VPS13A, Length 1,155 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-211ENST00000484581 LCE3AQ5TA76 89 aa3.04□□□□□ -1.92
VPS13A-211ENST00000484581 ZNF691Q5VV52 312 aa3.04□□□□□ -1.92
VPS13A-211ENST00000484581 RESP18Q5W5W9 173 aa3.04□□□□□ -1.92
VPS13A-211ENST00000484581 EPGNQ6UW88 154 aa3.04□□□□□ -1.92
VPS13A-211ENST00000484581 PCP2Q8IVA1 136 aa3.04□□□□□ -1.92
VPS13A-211ENST00000484581 CYB561A3Q8NBI2 242 aa3.04□□□□□ -1.92
VPS13A-211ENST00000484581 RXFP2Q8WXD0 754 aa3.04□□□□□ -1.92
VPS13A-211ENST00000484581 ING5Q8WYH8 240 aa3.04□□□□□ -1.92
VPS13A-211ENST00000484581 GTF2H4Q92759 462 aa3.04□□□□□ -1.92
VPS13A-211ENST00000484581 ELSPBP1Q96BH3 223 aa3.04□□□□□ -1.92
VPS13A-211ENST00000484581 CAMK2N2Q96S95 79 aa3.04□□□□□ -1.92
VPS13A-211ENST00000484581 TIMM17AQ99595 171 aa3.04□□□□□ -1.92
VPS13A-211ENST00000484581 C20orf144Q9BQM9 153 aa3.04□□□□□ -1.92
VPS13A-211ENST00000484581 EMC6Q9BV81 110 aa3.04□□□□□ -1.92
VPS13A-211ENST00000484581 SAMD10Q9BYL1 202 aa3.04□□□□□ -1.92
VPS13A-211ENST00000484581 PRORYQ9H606 182 aa3.04□□□□□ -1.92
VPS13A-211ENST00000484581 WDR55Q9H6Y2 383 aaPredicted RBP3.04□□□□□ -1.92
VPS13A-211ENST00000484581 ZNF442Q9H7R0 627 aa3.04□□□□□ -1.92
VPS13A-211ENST00000484581 NOX3Q9HBY0 568 aa3.04□□□□□ -1.92
VPS13A-211ENST00000484581 CYB5R1Q9UHQ9 305 aa3.04□□□□□ -1.92
VPS13A-211ENST00000484581 VAX2Q9UIW0 290 aa3.04□□□□□ -1.92
VPS13A-211ENST00000484581 TP53TG3Q9ULZ0 132 aa3.04□□□□□ -1.92
VPS13A-211ENST00000484581 SLC7A11Q9UPY5 501 aa3.04□□□□□ -1.92
VPS13A-211ENST00000484581 C15orf41Q9Y2V0 281 aa3.04□□□□□ -1.92
VPS13A-211ENST00000484581 FADS3Q9Y5Q0 445 aa3.04□□□□□ -1.92
VPS13A-211ENST00000484581 CACNG2Q9Y698 323 aa3.04□□□□□ -1.92
VPS13A-211ENST00000484581 USP42Q9H9J4 1324 aaKnown RBP3.03□□□□□ -1.92
VPS13A-211ENST00000484581 TAAR5O14804 337 aa3.03□□□□□ -1.92
VPS13A-211ENST00000484581 B4GALT5O43286 388 aa3.03□□□□□ -1.92
VPS13A-211ENST00000484581 NDUFS6O75380 124 aaKnown RBP3.03□□□□□ -1.92
VPS13A-211ENST00000484581 BRI3O95415 125 aa3.03□□□□□ -1.92
VPS13A-211ENST00000484581 SLC25A27O95847 323 aa3.03□□□□□ -1.92
VPS13A-211ENST00000484581 IGHV1-8P0DP01 117 aa3.03□□□□□ -1.92
VPS13A-211ENST00000484581 ZNF19P17023 458 aa3.03□□□□□ -1.92
VPS13A-211ENST00000484581 PGAM1P18669 254 aa3.03□□□□□ -1.92
VPS13A-211ENST00000484581 DTYMKP23919 212 aa3.03□□□□□ -1.92
VPS13A-211ENST00000484581 CXCR1P25024 350 aa3.03□□□□□ -1.92
VPS13A-211ENST00000484581 HOXA9P31269 272 aa3.03□□□□□ -1.92
VPS13A-211ENST00000484581 HTR2BP41595 481 aa3.03□□□□□ -1.92
VPS13A-211ENST00000484581 CRATP43155 626 aa3.03□□□□□ -1.92
VPS13A-211ENST00000484581 OR12D2P58182 307 aa3.03□□□□□ -1.92
VPS13A-211ENST00000484581 UBE2KP61086 200 aa3.03□□□□□ -1.92
VPS13A-211ENST00000484581 NDPQ00604 133 aa3.03□□□□□ -1.92
VPS13A-211ENST00000484581 PMS2P3Q13401 168 aa3.03□□□□□ -1.92
VPS13A-211ENST00000484581 RBMY1FQ15415 496 aaKnown RBP3.03□□□□□ -1.92
VPS13A-211ENST00000484581 OR4D1Q15615 310 aa3.03□□□□□ -1.92
VPS13A-211ENST00000484581 MPPED2Q15777 294 aa3.03□□□□□ -1.92
VPS13A-211ENST00000484581 ZNF530Q6P9A1 599 aaPredicted RBP3.03□□□□□ -1.92
VPS13A-211ENST00000484581 Q6ZVH6 145 aa3.03□□□□□ -1.92
VPS13A-211ENST00000484581 FAM19A1Q7Z5A9 133 aa3.03□□□□□ -1.92
VPS13A-211ENST00000484581 SETD3Q86TU7 594 aaPredicted RBP3.03□□□□□ -1.92
VPS13A-211ENST00000484581 NELFCDQ8IXH7 590 aa3.03□□□□□ -1.92
VPS13A-211ENST00000484581 SLC7A5P1Q8MH63 180 aa3.03□□□□□ -1.92
VPS13A-211ENST00000484581 OR7G1Q8NGA0 311 aa3.03□□□□□ -1.92
VPS13A-211ENST00000484581 OR2Y1Q8NGV0 311 aa3.03□□□□□ -1.92
VPS13A-211ENST00000484581 SMARCD1Q96GM5 515 aa3.03□□□□□ -1.92
VPS13A-211ENST00000484581 BMFQ96LC9 184 aa3.03□□□□□ -1.92
VPS13A-211ENST00000484581 ZNF396Q96N95 335 aaPredicted RBP3.03□□□□□ -1.92
VPS13A-211ENST00000484581 ZFP3Q96NJ6 502 aa3.03□□□□□ -1.92
VPS13A-211ENST00000484581 CATSPER2Q96P56 530 aa3.03□□□□□ -1.92
VPS13A-211ENST00000484581 OR2A5Q96R48 311 aa3.03□□□□□ -1.92
VPS13A-211ENST00000484581 HSD17B10Q99714 261 aaKnown RBP3.03□□□□□ -1.92
VPS13A-211ENST00000484581 SLC25A39Q9BZJ4 359 aaPredicted RBP3.03□□□□□ -1.92
VPS13A-211ENST00000484581 NDEL1Q9GZM8 345 aa3.03□□□□□ -1.92
VPS13A-211ENST00000484581 COA1Q9GZY4 146 aa3.03□□□□□ -1.92
VPS13A-211ENST00000484581 ACOT13Q9NPJ3 140 aa3.03□□□□□ -1.92
VPS13A-211ENST00000484581 PRR34Q9NV39 138 aa3.03□□□□□ -1.92
VPS13A-211ENST00000484581 OR12D3Q9UGF7 316 aa3.03□□□□□ -1.92
VPS13A-211ENST00000484581 TFR2Q9UP52 801 aa3.03□□□□□ -1.92
VPS13A-211ENST00000484581 PRG3Q9Y2Y8 225 aaPredicted RBP3.03□□□□□ -1.92
VPS13A-211ENST00000484581 TMEM131Q92545 1883 aa3.03□□□□□ -1.93
VPS13A-211ENST00000484581 IGHV5-10-1A0A0J9YXX1 117 aa3.02□□□□□ -1.93
VPS13A-211ENST00000484581 FAM240AA0A1B0GVK7 77 aa3.02□□□□□ -1.93
VPS13A-211ENST00000484581 RAD51BO15315 384 aa3.02□□□□□ -1.93
VPS13A-211ENST00000484581 CBR3O75828 277 aa3.02□□□□□ -1.93
VPS13A-211ENST00000484581 SLC22A5O76082 557 aa3.02□□□□□ -1.93
VPS13A-211ENST00000484581 CD8AP01732 235 aa3.02□□□□□ -1.93
VPS13A-211ENST00000484581 MMP7P09237 267 aaPredicted RBP3.02□□□□□ -1.93
VPS13A-211ENST00000484581 SLC35E2BP0CK96 405 aa3.02□□□□□ -1.93
VPS13A-211ENST00000484581 SYT1P21579 422 aa3.02□□□□□ -1.93
VPS13A-211ENST00000484581 UGT2B10P36537 528 aa3.02□□□□□ -1.93
VPS13A-211ENST00000484581 RPS9P46781 194 aaKnown RBP3.02□□□□□ -1.93
VPS13A-211ENST00000484581 ERFP50548 548 aa3.02□□□□□ -1.93
VPS13A-211ENST00000484581 GFERP55789 205 aa3.02□□□□□ -1.93
VPS13A-211ENST00000484581 RPL23P62829 140 aaKnown RBP3.02□□□□□ -1.93
VPS13A-211ENST00000484581 TPM4P67936 248 aa3.02□□□□□ -1.93
VPS13A-211ENST00000484581 IFITM3Q01628 133 aa3.02□□□□□ -1.93
VPS13A-211ENST00000484581 TRDNQ13061 729 aa3.02□□□□□ -1.93
VPS13A-211ENST00000484581 GUSBP1Q15486 140 aa3.02□□□□□ -1.93
VPS13A-211ENST00000484581 TOMM34Q15785 309 aaPredicted RBP3.02□□□□□ -1.93
VPS13A-211ENST00000484581 ZBTB6Q15916 424 aa3.02□□□□□ -1.93
VPS13A-211ENST00000484581 FBXW9Q5XUX1 488 aa3.02□□□□□ -1.93
VPS13A-211ENST00000484581 ZNF584Q8IVC4 421 aa3.02□□□□□ -1.93
VPS13A-211ENST00000484581 RNF175Q8N4F7 328 aa3.02□□□□□ -1.93
VPS13A-211ENST00000484581 NT5CQ8TCD5 201 aa3.02□□□□□ -1.93
VPS13A-211ENST00000484581 RXFP4Q8TDU9 374 aa3.02□□□□□ -1.93
VPS13A-211ENST00000484581 C15orf40Q8WUR7 153 aa3.02□□□□□ -1.93
VPS13A-211ENST00000484581 PTX4Q96A99 478 aa3.02□□□□□ -1.93
VPS13A-211ENST00000484581 LRRC45Q96CN5 670 aa3.02□□□□□ -1.93
VPS13A-211ENST00000484581 LLPHQ9BRT6 129 aaKnown RBP3.02□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms