RNA–Protein interactions for RNA: ENST00000484112.5

CPSF4-213, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 825 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-213ENST00000484112 TBX1O43435 398 aa8.41□□□□□ -1.06
CPSF4-213ENST00000484112 PTBP3O95758 552 aaKnown RBP8.41□□□□□ -1.06
CPSF4-213ENST00000484112 KRT8P05787 483 aa8.41□□□□□ -1.06
CPSF4-213ENST00000484112 MRPL3P09001 348 aaKnown RBP8.41□□□□□ -1.06
CPSF4-213ENST00000484112 GABRB1P18505 474 aa8.41□□□□□ -1.06
CPSF4-213ENST00000484112 CXCR4P61073 352 aa8.41□□□□□ -1.06
CPSF4-213ENST00000484112 FAM3AP98173 230 aa8.41□□□□□ -1.06
CPSF4-213ENST00000484112 RCN1Q15293 331 aa8.41□□□□□ -1.06
CPSF4-213ENST00000484112 OR8B8Q15620 311 aa8.41□□□□□ -1.06
CPSF4-213ENST00000484112 ZIK1Q3SY52 487 aaPredicted RBP8.41□□□□□ -1.06
CPSF4-213ENST00000484112 ZBTB37Q5TC79 503 aa8.41□□□□□ -1.06
CPSF4-213ENST00000484112 LPCAT4Q643R3 524 aa8.41□□□□□ -1.06
CPSF4-213ENST00000484112 LRRN1Q6UXK5 716 aa8.41□□□□□ -1.06
CPSF4-213ENST00000484112 FAM57BQ71RH2 274 aa8.41□□□□□ -1.06
CPSF4-213ENST00000484112 SPATC1Q76KD6 591 aa8.41□□□□□ -1.06
CPSF4-213ENST00000484112 C1orf87Q8N0U7 546 aa8.41□□□□□ -1.06
CPSF4-213ENST00000484112 SETD9Q8NE22 299 aa8.41□□□□□ -1.06
CPSF4-213ENST00000484112 CCDC54Q8NEL0 328 aa8.41□□□□□ -1.06
CPSF4-213ENST00000484112 OR51G2Q8NGK0 314 aa8.41□□□□□ -1.06
CPSF4-213ENST00000484112 RHOXF1Q8NHV9 184 aa8.41□□□□□ -1.06
CPSF4-213ENST00000484112 Q8TCH9 128 aa8.41□□□□□ -1.06
CPSF4-213ENST00000484112 HAVCR2Q8TDQ0 301 aa8.41□□□□□ -1.06
CPSF4-213ENST00000484112 CCL17Q92583 94 aa8.41□□□□□ -1.06
CPSF4-213ENST00000484112 GTF3AQ92664 365 aaKnown RBP8.41□□□□□ -1.06
CPSF4-213ENST00000484112 MRPL48Q96GC5 212 aaKnown RBP8.41□□□□□ -1.06
CPSF4-213ENST00000484112 OR2V2Q96R30 315 aa8.41□□□□□ -1.06
CPSF4-213ENST00000484112 TMEM106BQ9NUM4 274 aa8.41□□□□□ -1.06
CPSF4-213ENST00000484112 C14orf119Q9NWQ9 140 aa8.41□□□□□ -1.06
CPSF4-213ENST00000484112 FAM118AQ9NWS6 357 aa8.41□□□□□ -1.06
CPSF4-213ENST00000484112 FAM206AQ9NX38 181 aa8.41□□□□□ -1.06
CPSF4-213ENST00000484112 NUFIP1Q9UHK0 495 aaKnown RBP8.41□□□□□ -1.06
CPSF4-213ENST00000484112 PPP1R3CQ9UQK1 317 aa8.41□□□□□ -1.06
CPSF4-213ENST00000484112 KLHDC2Q9Y2U9 406 aa8.41□□□□□ -1.06
CPSF4-213ENST00000484112 WIPI2Q9Y4P8 454 aa8.41□□□□□ -1.06
CPSF4-213ENST00000484112 SNX5Q9Y5X3 404 aa8.41□□□□□ -1.06
CPSF4-213ENST00000484112 CACNG2Q9Y698 323 aa8.41□□□□□ -1.06
CPSF4-213ENST00000484112 HSPE1-MOB4S4R3N1 261 aa8.41□□□□□ -1.06
CPSF4-213ENST00000484112 IRGMA1A4Y4 181 aa8.4□□□□□ -1.06
CPSF4-213ENST00000484112 ISPDA4D126 451 aa8.4□□□□□ -1.06
CPSF4-213ENST00000484112 DHRS7CA6NNS2 312 aa8.4□□□□□ -1.06
CPSF4-213ENST00000484112 H0YAE9 185 aa8.4□□□□□ -1.06
CPSF4-213ENST00000484112 M0R129 80 aa8.4□□□□□ -1.06
CPSF4-213ENST00000484112 MLNRO43193 412 aa8.4□□□□□ -1.06
CPSF4-213ENST00000484112 MTRF1O75570 445 aaKnown RBP8.4□□□□□ -1.06
CPSF4-213ENST00000484112 ATP6V1G2O95670 118 aa8.4□□□□□ -1.06
CPSF4-213ENST00000484112 CST4P01036 141 aa8.4□□□□□ -1.06
CPSF4-213ENST00000484112 IGHV2-5P01817 119 aa8.4□□□□□ -1.06
CPSF4-213ENST00000484112 RPSAP08865 295 aaKnown RBP8.4□□□□□ -1.06
CPSF4-213ENST00000484112 HKR1P10072 659 aa8.4□□□□□ -1.06
CPSF4-213ENST00000484112 SLC2A1P11166 492 aa8.4□□□□□ -1.06
CPSF4-213ENST00000484112 LCN2P80188 198 aa8.4□□□□□ -1.06
CPSF4-213ENST00000484112 RAB40BQ12829 278 aa8.4□□□□□ -1.06
CPSF4-213ENST00000484112 OR8G1Q15617 311 aa8.4□□□□□ -1.06
CPSF4-213ENST00000484112 TMEM155Q4W5P6 130 aa8.4□□□□□ -1.06
CPSF4-213ENST00000484112 OGFRL1Q5TC84 451 aaPredicted RBP8.4□□□□□ -1.06
CPSF4-213ENST00000484112 TREML4Q6UXN2 200 aa8.4□□□□□ -1.06
CPSF4-213ENST00000484112 PLEKHG7Q6ZR37 379 aa8.4□□□□□ -1.06
CPSF4-213ENST00000484112 BCDIN3DQ7Z5W3 292 aaKnown RBP8.4□□□□□ -1.06
CPSF4-213ENST00000484112 ENTHD1Q8IYW4 607 aa8.4□□□□□ -1.06
CPSF4-213ENST00000484112 OR5AS1Q8N127 324 aa8.4□□□□□ -1.06
CPSF4-213ENST00000484112 MUC20Q8N307 709 aaPredicted RBP8.4□□□□□ -1.06
CPSF4-213ENST00000484112 SIGLECL1Q8N7X8 197 aa8.4□□□□□ -1.06
CPSF4-213ENST00000484112 BHLHE23Q8NDY6 225 aa8.4□□□□□ -1.06
CPSF4-213ENST00000484112 OR2AE1Q8NHA4 323 aa8.4□□□□□ -1.06
CPSF4-213ENST00000484112 MEGF10Q96KG7 1140 aa8.4□□□□□ -1.06
CPSF4-213ENST00000484112 GAL3ST1Q99999 423 aa8.4□□□□□ -1.06
CPSF4-213ENST00000484112 GCM1Q9NP62 436 aa8.4□□□□□ -1.06
CPSF4-213ENST00000484112 INPP5EQ9NRR6 644 aa8.4□□□□□ -1.06
CPSF4-213ENST00000484112 MRPS18AQ9NVS2 196 aaKnown RBP8.4□□□□□ -1.06
CPSF4-213ENST00000484112 UBAP1Q9NZ09 502 aa8.4□□□□□ -1.06
CPSF4-213ENST00000484112 DNAJC27Q9NZQ0 273 aa8.4□□□□□ -1.06
CPSF4-213ENST00000484112 IKZF2Q9UKS7 526 aa8.4□□□□□ -1.06
CPSF4-213ENST00000484112 COPS3Q9UNS2 423 aa8.4□□□□□ -1.06
CPSF4-213ENST00000484112 EXOGQ9Y2C4 368 aaKnown RBP8.4□□□□□ -1.06
CPSF4-213ENST00000484112 RPL36Q9Y3U8 105 aaKnown RBP8.4□□□□□ -1.06
CPSF4-213ENST00000484112 MPC1Q9Y5U8 109 aa8.4□□□□□ -1.06
CPSF4-213ENST00000484112 NPTNQ9Y639 398 aa8.4□□□□□ -1.06
CPSF4-213ENST00000484112 R4GMQ9 66 aa8.4□□□□□ -1.06
CPSF4-213ENST00000484112 TANC2Q9HCD6 1990 aa8.39□□□□□ -1.07
CPSF4-213ENST00000484112 A0A1W2PQL4 384 aaPredicted RBP8.39□□□□□ -1.07
CPSF4-213ENST00000484112 METTL15A6NJ78 407 aa8.39□□□□□ -1.07
CPSF4-213ENST00000484112 LOC110117498-PIK3R3F6TDL0 507 aa8.39□□□□□ -1.07
CPSF4-213ENST00000484112 H0YJX3 145 aa8.39□□□□□ -1.07
CPSF4-213ENST00000484112 J3QRE1 110 aa8.39□□□□□ -1.07
CPSF4-213ENST00000484112 ENTPD6O75354 484 aa8.39□□□□□ -1.07
CPSF4-213ENST00000484112 SRSF10O75494 262 aaKnown RBP8.39□□□□□ -1.07
CPSF4-213ENST00000484112 FADS2O95864 444 aaKnown RBP8.39□□□□□ -1.07
CPSF4-213ENST00000484112 IGLV3-1P01715 115 aa8.39□□□□□ -1.07
CPSF4-213ENST00000484112 IRF2P14316 349 aa8.39□□□□□ -1.07
CPSF4-213ENST00000484112 GNALP38405 381 aa8.39□□□□□ -1.07
CPSF4-213ENST00000484112 MAP2K3P46734 347 aa8.39□□□□□ -1.07
CPSF4-213ENST00000484112 GSK3AP49840 483 aa8.39□□□□□ -1.07
CPSF4-213ENST00000484112 HCCSP53701 268 aa8.39□□□□□ -1.07
CPSF4-213ENST00000484112 ACTA2P62736 377 aa8.39□□□□□ -1.07
CPSF4-213ENST00000484112 ACTG2P63267 376 aa8.39□□□□□ -1.07
CPSF4-213ENST00000484112 IL5RAQ01344 420 aa8.39□□□□□ -1.07
CPSF4-213ENST00000484112 MRPL28Q13084 256 aaKnown RBP8.39□□□□□ -1.07
CPSF4-213ENST00000484112 MIDNQ504T8 468 aa8.39□□□□□ -1.07
CPSF4-213ENST00000484112 KLHL22Q53GT1 634 aa8.39□□□□□ -1.07
CPSF4-213ENST00000484112 ZNF684Q5T5D7 378 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms