RNA–Protein interactions for RNA: ENST00000481194.1

CCM2-214, Transcript of CCM2 scaffold protein, humanhuman

TSL 1 (best)

Gene CCM2, Length 5,304 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-214ENST00000481194 TIPARPQ7Z3E1 657 aaKnown RBP17.02■□□□□ 0.32
CCM2-214ENST00000481194 WDSUB1Q8N9V3 476 aa17.02■□□□□ 0.32
CCM2-214ENST00000481194 ZNF703Q9H7S9 590 aaPredicted RBP17.02■□□□□ 0.32
CCM2-214ENST00000481194 MS4A18H0YCH9 400 aa17.02■□□□□ 0.32
CCM2-214ENST00000481194 TUBG1P23258 451 aa17.02■□□□□ 0.32
CCM2-214ENST00000481194 LIMK1P53667 647 aa17.02■□□□□ 0.32
CCM2-214ENST00000481194 MS4A18Q3C1V0 323 aa17.02■□□□□ 0.32
CCM2-214ENST00000481194 CCDC71Q8IV32 467 aaPredicted RBP17.02■□□□□ 0.32
CCM2-214ENST00000481194 C11orf54Q9H0W9 315 aaPredicted RBP17.02■□□□□ 0.32
CCM2-214ENST00000481194 TUBG2Q9NRH3 451 aa17.02■□□□□ 0.32
CCM2-214ENST00000481194 NRARPQ7Z6K4 114 aa17.02■□□□□ 0.31
CCM2-214ENST00000481194 MAB21L2Q9Y586 359 aa17.02■□□□□ 0.31
CCM2-214ENST00000481194 CRHP06850 196 aa17.01■□□□□ 0.31
CCM2-214ENST00000481194 ACSM4P0C7M7 580 aa17.01■□□□□ 0.31
CCM2-214ENST00000481194 RFX2P48378 723 aa17.01■□□□□ 0.31
CCM2-214ENST00000481194 ZNF81P51508 661 aa17.01■□□□□ 0.31
CCM2-214ENST00000481194 TATDN3Q17R31 274 aa17.01■□□□□ 0.31
CCM2-214ENST00000481194 PLA2G2CQ5R387 149 aa17.01■□□□□ 0.31
CCM2-214ENST00000481194 HAGHLQ6PII5 290 aaPredicted RBP17.01■□□□□ 0.31
CCM2-214ENST00000481194 LINC00114Q6XXX2 140 aa17.01■□□□□ 0.31
CCM2-214ENST00000481194 GIMAP1Q8WWP7 306 aa17.01■□□□□ 0.31
CCM2-214ENST00000481194 KLF7O75840 302 aaPredicted RBP17.01■□□□□ 0.31
CCM2-214ENST00000481194 ACTL6BO94805 426 aa17.01■□□□□ 0.31
CCM2-214ENST00000481194 ZIC2O95409 532 aaPredicted RBP17.01■□□□□ 0.31
CCM2-214ENST00000481194 SNRPD2P62316 118 aaKnown RBP17.01■□□□□ 0.31
CCM2-214ENST00000481194 LRRC37A5PQ49AS3 106 aa17.01■□□□□ 0.31
CCM2-214ENST00000481194 OR1S1Q8NH92 325 aa17.01■□□□□ 0.31
CCM2-214ENST00000481194 KCNJ16Q9NPI9 418 aa17.01■□□□□ 0.31
CCM2-214ENST00000481194 CD300LBA8K4G0 201 aa17.01■□□□□ 0.31
CCM2-214ENST00000481194 PRDX4Q13162 271 aa17.01■□□□□ 0.31
CCM2-214ENST00000481194 SLC25A35Q3KQZ1 300 aa17.01■□□□□ 0.31
CCM2-214ENST00000481194 TMEM45BQ96B21 275 aa17.01■□□□□ 0.31
CCM2-214ENST00000481194 MMP15P51511 669 aa17.01■□□□□ 0.31
CCM2-214ENST00000481194 MECP2P51608 486 aaKnown RBP17.01■□□□□ 0.31
CCM2-214ENST00000481194 CDH26Q8IXH8 852 aa17.01■□□□□ 0.31
CCM2-214ENST00000481194 OR52I2Q8NH67 350 aa17.01■□□□□ 0.31
CCM2-214ENST00000481194 RBM38Q9H0Z9 239 aaKnown RBP17.01■□□□□ 0.31
CCM2-214ENST00000481194 AKIRIN1Q9H9L7 192 aaPredicted RBP17.01■□□□□ 0.31
CCM2-214ENST00000481194 NOTCH4Q99466 2003 aa17.01■□□□□ 0.31
CCM2-214ENST00000481194 CABIN1Q9Y6J0 2220 aa17.01■□□□□ 0.31
CCM2-214ENST00000481194 CHST6Q9GZX3 395 aa17■□□□□ 0.31
CCM2-214ENST00000481194 ZNF224Q9NZL3 707 aa17■□□□□ 0.31
CCM2-214ENST00000481194 CRYBA2P53672 197 aa17■□□□□ 0.31
CCM2-214ENST00000481194 ARSJQ5FYB0 599 aaPredicted RBP17■□□□□ 0.31
CCM2-214ENST00000481194 CCDC190Q86UF4 302 aa17■□□□□ 0.31
CCM2-214ENST00000481194 OR8H3Q8N146 312 aa17■□□□□ 0.31
CCM2-214ENST00000481194 BEST4Q8NFU0 473 aa17■□□□□ 0.31
CCM2-214ENST00000481194 ALG5Q9Y673 324 aa17■□□□□ 0.31
CCM2-214ENST00000481194 CKAP5Q14008 2032 aa17■□□□□ 0.31
CCM2-214ENST00000481194 S100A6P06703 90 aa17■□□□□ 0.31
CCM2-214ENST00000481194 IL11P20809 199 aa17■□□□□ 0.31
CCM2-214ENST00000481194 KLF3P57682 345 aaPredicted RBP17■□□□□ 0.31
CCM2-214ENST00000481194 KISS1Q15726 138 aa17■□□□□ 0.31
CCM2-214ENST00000481194 ATP1A1-AS1Q5TC04 95 aa17■□□□□ 0.31
CCM2-214ENST00000481194 BMPERQ8N8U9 685 aa17■□□□□ 0.31
CCM2-214ENST00000481194 OR10K1Q8NGX5 313 aa17■□□□□ 0.31
CCM2-214ENST00000481194 ZNF471Q9BX82 626 aaPredicted RBP17■□□□□ 0.31
CCM2-214ENST00000481194 SLIRPQ9GZT3 109 aaKnown RBP17■□□□□ 0.31
CCM2-214ENST00000481194 A8MV72 311 aaPredicted RBP17■□□□□ 0.31
CCM2-214ENST00000481194 HSPB6O14558 160 aa17■□□□□ 0.31
CCM2-214ENST00000481194 TGFBR1P36897 503 aa17■□□□□ 0.31
CCM2-214ENST00000481194 FRRS1LQ9P0K9 344 aa17■□□□□ 0.31
CCM2-214ENST00000481194 OR4C45A6NMZ5 311 aa17■□□□□ 0.31
CCM2-214ENST00000481194 AQP7O14520 342 aa17■□□□□ 0.31
CCM2-214ENST00000481194 ID4P47928 161 aa17■□□□□ 0.31
CCM2-214ENST00000481194 CFAP77Q6ZQR2 320 aa17■□□□□ 0.31
CCM2-214ENST00000481194 ZNF426Q9BUY5 554 aa17■□□□□ 0.31
CCM2-214ENST00000481194 ST3GAL6Q9Y274 331 aa17■□□□□ 0.31
CCM2-214ENST00000481194 RBMX2Q9Y388 322 aaKnown RBP17■□□□□ 0.31
CCM2-214ENST00000481194 IGLV1-36A0A0B4J1U3 117 aa16.99■□□□□ 0.31
CCM2-214ENST00000481194 TMEM200CA6NKL6 621 aa16.99■□□□□ 0.31
CCM2-214ENST00000481194 PRSS44E7EML9 344 aa16.99■□□□□ 0.31
CCM2-214ENST00000481194 EFSO43281 561 aa16.99■□□□□ 0.31
CCM2-214ENST00000481194 RAP2BP61225 183 aa16.99■□□□□ 0.31
CCM2-214ENST00000481194 ATXN7L3Q14CW9 347 aaPredicted RBP16.99■□□□□ 0.31
CCM2-214ENST00000481194 FDCSPQ8NFU4 85 aa16.99■□□□□ 0.31
CCM2-214ENST00000481194 OR10J5Q8NHC4 309 aa16.99■□□□□ 0.31
CCM2-214ENST00000481194 C20orf85Q9H1P6 137 aa16.99■□□□□ 0.31
CCM2-214ENST00000481194 DOCK8Q8NF50 2099 aa16.99■□□□□ 0.31
CCM2-214ENST00000481194 FAM90A27PA6NNH2 459 aa16.99■□□□□ 0.31
CCM2-214ENST00000481194 GPM6AP51674 278 aa16.99■□□□□ 0.31
CCM2-214ENST00000481194 GABRG1Q8N1C3 465 aa16.99■□□□□ 0.31
CCM2-214ENST00000481194 SMIM4Q8WVI0 70 aa16.99■□□□□ 0.31
CCM2-214ENST00000481194 CXXC4Q9H2H0 198 aa16.99■□□□□ 0.31
CCM2-214ENST00000481194 PMP2P02689 132 aa16.99■□□□□ 0.31
CCM2-214ENST00000481194 EDDM3BP56851 147 aa16.99■□□□□ 0.31
CCM2-214ENST00000481194 INPP5JQ15735 1006 aaPredicted RBP16.99■□□□□ 0.31
CCM2-214ENST00000481194 FAM27D1Q5T7N8 215 aa16.99■□□□□ 0.31
CCM2-214ENST00000481194 FNDC7Q5VTL7 733 aa16.99■□□□□ 0.31
CCM2-214ENST00000481194 MRPS24Q96EL2 167 aaKnown RBP16.99■□□□□ 0.31
CCM2-214ENST00000481194 UFSP2Q9NUQ7 469 aa16.99■□□□□ 0.31
CCM2-214ENST00000481194 GPR137BO60478 399 aa16.99■□□□□ 0.31
CCM2-214ENST00000481194 GSK3AP49840 483 aa16.99■□□□□ 0.31
CCM2-214ENST00000481194 ROM1Q03395 351 aa16.99■□□□□ 0.31
CCM2-214ENST00000481194 RHOUQ7L0Q8 258 aa16.99■□□□□ 0.31
CCM2-214ENST00000481194 COMTD1Q86VU5 262 aa16.99■□□□□ 0.31
CCM2-214ENST00000481194 EGR4Q05215 589 aa16.98■□□□□ 0.31
CCM2-214ENST00000481194 CDX4O14627 284 aaPredicted RBP16.98■□□□□ 0.31
CCM2-214ENST00000481194 PTGFRP43088 359 aa16.98■□□□□ 0.31
CCM2-214ENST00000481194 PMP22Q01453 160 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms