RNA–Protein interactions for RNA: ENST00000480057.1

VTI1A-204, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-204ENST00000480057 GDNFP39905 211 aa9.55□□□□□ -0.88
VTI1A-204ENST00000480057 TDGF1P3P51864 188 aa9.55□□□□□ -0.88
VTI1A-204ENST00000480057 EFNB2P52799 333 aa9.55□□□□□ -0.88
VTI1A-204ENST00000480057 PER3P56645 1201 aa9.55□□□□□ -0.88
VTI1A-204ENST00000480057 ZNF92Q03936 586 aa9.55□□□□□ -0.88
VTI1A-204ENST00000480057 MRPL49Q13405 166 aaKnown RBP9.55□□□□□ -0.88
VTI1A-204ENST00000480057 MADCAM1Q13477 382 aa9.55□□□□□ -0.88
VTI1A-204ENST00000480057 KLF9Q13886 244 aaPredicted RBP9.55□□□□□ -0.88
VTI1A-204ENST00000480057 KISS1Q15726 138 aa9.55□□□□□ -0.88
VTI1A-204ENST00000480057 TBC1D28Q2M2D7 210 aa9.55□□□□□ -0.88
VTI1A-204ENST00000480057 HIKESHIQ53FT3 197 aa9.55□□□□□ -0.88
VTI1A-204ENST00000480057 AWAT2Q6E213 333 aa9.55□□□□□ -0.88
VTI1A-204ENST00000480057 RTL6Q6ICC9 239 aa9.55□□□□□ -0.88
VTI1A-204ENST00000480057 PLET1Q6UQ28 207 aa9.55□□□□□ -0.88
VTI1A-204ENST00000480057 BEND4Q6ZU67 534 aa9.55□□□□□ -0.88
VTI1A-204ENST00000480057 LHFPL2Q6ZUX7 228 aa9.55□□□□□ -0.88
VTI1A-204ENST00000480057 SEM1Q6ZVN7 128 aa9.55□□□□□ -0.88
VTI1A-204ENST00000480057 ANGPTL5Q86XS5 388 aa9.55□□□□□ -0.88
VTI1A-204ENST00000480057 ZNF584Q8IVC4 421 aa9.55□□□□□ -0.88
VTI1A-204ENST00000480057 GCNT2Q8N0V5 402 aa9.55□□□□□ -0.88
VTI1A-204ENST00000480057 GABRG1Q8N1C3 465 aa9.55□□□□□ -0.88
VTI1A-204ENST00000480057 FTMTQ8N4E7 242 aa9.55□□□□□ -0.88
VTI1A-204ENST00000480057 FAM169BQ8N8A8 192 aa9.55□□□□□ -0.88
VTI1A-204ENST00000480057 CNEP1R1Q8N9A8 125 aa9.55□□□□□ -0.88
VTI1A-204ENST00000480057 DTX3Q8N9I9 347 aa9.55□□□□□ -0.88
VTI1A-204ENST00000480057 CSNK2A3Q8NEV1 391 aa9.55□□□□□ -0.88
VTI1A-204ENST00000480057 OR5L1Q8NGL2 311 aa9.55□□□□□ -0.88
VTI1A-204ENST00000480057 SFXN3Q9BWM7 321 aa9.55□□□□□ -0.88
VTI1A-204ENST00000480057 CST11Q9H112 138 aa9.55□□□□□ -0.88
VTI1A-204ENST00000480057 KCNN3Q9UGI6 736 aa9.55□□□□□ -0.88
VTI1A-204ENST00000480057 FREM2Q5SZK8 3169 aa9.55□□□□□ -0.88
VTI1A-204ENST00000480057 TRAV18A0A075B6X5 111 aa9.54□□□□□ -0.88
VTI1A-204ENST00000480057 FAM240BA0A1B0GVZ2 78 aa9.54□□□□□ -0.88
VTI1A-204ENST00000480057 H7C417 338 aa9.54□□□□□ -0.88
VTI1A-204ENST00000480057 GMDSO60547 372 aa9.54□□□□□ -0.88
VTI1A-204ENST00000480057 CST4P01036 141 aa9.54□□□□□ -0.88
VTI1A-204ENST00000480057 NRASP01111 189 aa9.54□□□□□ -0.88
VTI1A-204ENST00000480057 IL2RAP01589 272 aa9.54□□□□□ -0.88
VTI1A-204ENST00000480057 TPOP07202 933 aa9.54□□□□□ -0.88
VTI1A-204ENST00000480057 CD3GP09693 182 aa9.54□□□□□ -0.88
VTI1A-204ENST00000480057 CBR1P16152 277 aa9.54□□□□□ -0.88
VTI1A-204ENST00000480057 ZNF14P17017 642 aaPredicted RBP9.54□□□□□ -0.88
VTI1A-204ENST00000480057 TUBG1P23258 451 aa9.54□□□□□ -0.88
VTI1A-204ENST00000480057 HOXC12P31275 282 aa9.54□□□□□ -0.88
VTI1A-204ENST00000480057 CEACAM8P31997 349 aaPredicted RBP9.54□□□□□ -0.88
VTI1A-204ENST00000480057 PRSS3P35030 304 aa9.54□□□□□ -0.88
VTI1A-204ENST00000480057 PTGFRP43088 359 aa9.54□□□□□ -0.88
VTI1A-204ENST00000480057 KIR2DL3P43628 341 aa9.54□□□□□ -0.88
VTI1A-204ENST00000480057 FUT6P51993 359 aa9.54□□□□□ -0.88
VTI1A-204ENST00000480057 PMPCAQ10713 525 aa9.54□□□□□ -0.88
VTI1A-204ENST00000480057 PLA2G7Q13093 441 aa9.54□□□□□ -0.88
VTI1A-204ENST00000480057 UNC119Q13432 240 aa9.54□□□□□ -0.88
VTI1A-204ENST00000480057 TNK1Q13470 666 aa9.54□□□□□ -0.88
VTI1A-204ENST00000480057 GPR176Q14439 515 aa9.54□□□□□ -0.88
VTI1A-204ENST00000480057 ARL6IP1Q15041 203 aa9.54□□□□□ -0.88
VTI1A-204ENST00000480057 OLFML2AQ68BL7 652 aa9.54□□□□□ -0.88
VTI1A-204ENST00000480057 VWA1Q6PCB0 445 aa9.54□□□□□ -0.88
VTI1A-204ENST00000480057 GLIPR1L1Q6UWM5 242 aa9.54□□□□□ -0.88
VTI1A-204ENST00000480057 MRPL21Q7Z2W9 205 aaKnown RBP9.54□□□□□ -0.88
VTI1A-204ENST00000480057 MDP1Q86V88 176 aa9.54□□□□□ -0.88
VTI1A-204ENST00000480057 IZUMO1Q8IYV9 350 aa9.54□□□□□ -0.88
VTI1A-204ENST00000480057 PAQR4Q8N4S7 273 aaPredicted RBP9.54□□□□□ -0.88
VTI1A-204ENST00000480057 Q8NA96 180 aa9.54□□□□□ -0.88
VTI1A-204ENST00000480057 SLC30A7Q8NEW0 376 aa9.54□□□□□ -0.88
VTI1A-204ENST00000480057 OR52I2Q8NH67 350 aa9.54□□□□□ -0.88
VTI1A-204ENST00000480057 OR2AE1Q8NHA4 323 aa9.54□□□□□ -0.88
VTI1A-204ENST00000480057 UBASH3BQ8TF42 649 aa9.54□□□□□ -0.88
VTI1A-204ENST00000480057 EXTL1Q92935 676 aa9.54□□□□□ -0.88
VTI1A-204ENST00000480057 STARD4Q96DR4 205 aa9.54□□□□□ -0.88
VTI1A-204ENST00000480057 POM121Q96HA1 1249 aa9.54□□□□□ -0.88
VTI1A-204ENST00000480057 C1orf147Q96MC9 270 aaPredicted RBP9.54□□□□□ -0.88
VTI1A-204ENST00000480057 DOCK7Q96N67 2140 aa9.54□□□□□ -0.88
VTI1A-204ENST00000480057 GPER1Q99527 375 aa9.54□□□□□ -0.88
VTI1A-204ENST00000480057 SLX1AQ9BQ83 275 aa9.54□□□□□ -0.88
VTI1A-204ENST00000480057 MARVELD1Q9BSK0 173 aa9.54□□□□□ -0.88
VTI1A-204ENST00000480057 URM1Q9BTM9 101 aaKnown RBP9.54□□□□□ -0.88
VTI1A-204ENST00000480057 TP63Q9H3D4 680 aaPredicted RBP9.54□□□□□ -0.88
VTI1A-204ENST00000480057 AUNIPQ9H7T9 357 aa9.54□□□□□ -0.88
VTI1A-204ENST00000480057 TUBG2Q9NRH3 451 aa9.54□□□□□ -0.88
VTI1A-204ENST00000480057 MTFP1Q9UDX5 166 aa9.54□□□□□ -0.88
VTI1A-204ENST00000480057 SLC7A11Q9UPY5 501 aa9.54□□□□□ -0.88
VTI1A-204ENST00000480057 FAM215AQ9Y5M1 114 aa9.54□□□□□ -0.88
VTI1A-204ENST00000480057 FREM1Q5H8C1 2179 aa9.54□□□□□ -0.88
VTI1A-204ENST00000480057 LINC00854A0A1B0GVQ3 168 aa9.53□□□□□ -0.88
VTI1A-204ENST00000480057 ANKRD20A5PA0PJZ0 165 aa9.53□□□□□ -0.88
VTI1A-204ENST00000480057 RAB27BO00194 218 aa9.53□□□□□ -0.88
VTI1A-204ENST00000480057 SSX4O60224 188 aa9.53□□□□□ -0.88
VTI1A-204ENST00000480057 ZNF780AO75290 641 aaPredicted RBP9.53□□□□□ -0.88
VTI1A-204ENST00000480057 RAD51DO75771 328 aa9.53□□□□□ -0.88
VTI1A-204ENST00000480057 RBBP9O75884 186 aa9.53□□□□□ -0.88
VTI1A-204ENST00000480057 KDM4BO94953 1096 aa9.53□□□□□ -0.88
VTI1A-204ENST00000480057 LPLP06858 475 aa9.53□□□□□ -0.88
VTI1A-204ENST00000480057 MELTFP08582 738 aa9.53□□□□□ -0.88
VTI1A-204ENST00000480057 CSF1P09603 554 aa9.53□□□□□ -0.88
VTI1A-204ENST00000480057 TRAPPC2P0DI81 140 aa9.53□□□□□ -0.88
VTI1A-204ENST00000480057 TRAPPC2BP0DI82 140 aa9.53□□□□□ -0.88
VTI1A-204ENST00000480057 FAUP35544 74 aaKnown RBP9.53□□□□□ -0.88
VTI1A-204ENST00000480057 OR3A4PP47883 348 aa9.53□□□□□ -0.88
VTI1A-204ENST00000480057 RAG2P55895 527 aa9.53□□□□□ -0.88
VTI1A-204ENST00000480057 ACTBP60709 375 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms