RNA–Protein interactions for RNA: ENST00000477812.1

ACTB-210, Transcript of actin beta, humanhuman

TSL 2

Gene ACTB, Length 820 nt, Biotype retained intron, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-210ENST00000477812 TMEM42Q69YG0 159 aa16.96■□□□□ 0.31
ACTB-210ENST00000477812 CDH24Q86UP0 819 aa16.96■□□□□ 0.31
ACTB-210ENST00000477812 TSPAN14Q8NG11 270 aa16.96■□□□□ 0.31
ACTB-210ENST00000477812 OR13G1Q8NGZ3 307 aa16.96■□□□□ 0.31
ACTB-210ENST00000477812 UBASH3BQ8TF42 649 aa16.96■□□□□ 0.31
ACTB-210ENST00000477812 MGLLQ99685 303 aa16.96■□□□□ 0.31
ACTB-210ENST00000477812 GSX2Q9BZM3 304 aa16.96■□□□□ 0.31
ACTB-210ENST00000477812 COMMD4Q9H0A8 199 aa16.96■□□□□ 0.31
ACTB-210ENST00000477812 TPK1Q9H3S4 243 aa16.96■□□□□ 0.31
ACTB-210ENST00000477812 NKIRAS2Q9NYR9 191 aa16.96■□□□□ 0.31
ACTB-210ENST00000477812 ZDHHC8Q9ULC8 765 aa16.96■□□□□ 0.31
ACTB-210ENST00000477812 PNMA8CA0A1B0GUJ8 204 aa16.95■□□□□ 0.3
ACTB-210ENST00000477812 NDUFS7O75251 213 aa16.95■□□□□ 0.3
ACTB-210ENST00000477812 NCR1O76036 304 aa16.95■□□□□ 0.3
ACTB-210ENST00000477812 CD55P08174 381 aa16.95■□□□□ 0.3
ACTB-210ENST00000477812 SMIM18P0DKX4 95 aa16.95■□□□□ 0.3
ACTB-210ENST00000477812 CA6P23280 308 aa16.95■□□□□ 0.3
ACTB-210ENST00000477812 OR10AD1Q8NGE0 317 aa16.95■□□□□ 0.3
ACTB-210ENST00000477812 FCGR1BQ92637 280 aa16.95■□□□□ 0.3
ACTB-210ENST00000477812 SLC22A4Q9H015 551 aa16.95■□□□□ 0.3
ACTB-210ENST00000477812 TMEM100Q9NV29 134 aa16.95■□□□□ 0.3
ACTB-210ENST00000477812 BEX4Q9NWD9 120 aaPredicted RBP16.95■□□□□ 0.3
ACTB-210ENST00000477812 EDARQ9UNE0 448 aa16.95■□□□□ 0.3
ACTB-210ENST00000477812 PIGLQ9Y2B2 252 aa16.95■□□□□ 0.3
ACTB-210ENST00000477812 ZNF281Q9Y2X9 895 aa16.95■□□□□ 0.3
ACTB-210ENST00000477812 A0A087WXM4 84 aa16.94■□□□□ 0.3
ACTB-210ENST00000477812 ZNF816-ZNF321PA0A0X1KG74 233 aa16.94■□□□□ 0.3
ACTB-210ENST00000477812 ANKRD30BLA7E2S9 258 aa16.94■□□□□ 0.3
ACTB-210ENST00000477812 H0YL77 283 aa16.94■□□□□ 0.3
ACTB-210ENST00000477812 SPRY3O43610 288 aa16.94■□□□□ 0.3
ACTB-210ENST00000477812 HLA-DPB1P04440 258 aa16.94■□□□□ 0.3
ACTB-210ENST00000477812 RPSAP08865 295 aaKnown RBP16.94■□□□□ 0.3
ACTB-210ENST00000477812 CPEP16870 476 aa16.94■□□□□ 0.3
ACTB-210ENST00000477812 ZNF12P17014 697 aa16.94■□□□□ 0.3
ACTB-210ENST00000477812 DNASE1P24855 282 aa16.94■□□□□ 0.3
ACTB-210ENST00000477812 MAGEB1P43366 347 aa16.94■□□□□ 0.3
ACTB-210ENST00000477812 GPR50Q13585 617 aa16.94■□□□□ 0.3
ACTB-210ENST00000477812 DEFB113Q30KQ7 82 aa16.94■□□□□ 0.3
ACTB-210ENST00000477812 PCGF3Q3KNV8 242 aa16.94■□□□□ 0.3
ACTB-210ENST00000477812 SPRNQ5BIV9 151 aa16.94■□□□□ 0.3
ACTB-210ENST00000477812 FAM209AQ5JX71 171 aa16.94■□□□□ 0.3
ACTB-210ENST00000477812 OR2Z1Q8NG97 314 aa16.94■□□□□ 0.3
ACTB-210ENST00000477812 OR13C5Q8NGS8 318 aa16.94■□□□□ 0.3
ACTB-210ENST00000477812 ADAT3Q96EY9 351 aaPredicted RBP16.94■□□□□ 0.3
ACTB-210ENST00000477812 DIRC2Q96SL1 478 aa16.94■□□□□ 0.3
ACTB-210ENST00000477812 VRK1Q99986 396 aaPredicted RBP16.94■□□□□ 0.3
ACTB-210ENST00000477812 PAPOLGQ9BWT3 736 aaKnown RBP16.94■□□□□ 0.3
ACTB-210ENST00000477812 FGF23Q9GZV9 251 aaPredicted RBP16.94■□□□□ 0.3
ACTB-210ENST00000477812 ZNF275Q9NSD4 429 aaPredicted RBP16.94■□□□□ 0.3
ACTB-210ENST00000477812 ARID1AO14497 2285 aa16.93■□□□□ 0.3
ACTB-210ENST00000477812 TRBV5-5A0A0J9YX44 114 aa16.93■□□□□ 0.3
ACTB-210ENST00000477812 INMTO95050 263 aa16.93■□□□□ 0.3
ACTB-210ENST00000477812 IGHV4-39P01824 125 aa16.93■□□□□ 0.3
ACTB-210ENST00000477812 HSMCR30P0CW71 290 aa16.93■□□□□ 0.3
ACTB-210ENST00000477812 PTH2RP49190 550 aa16.93■□□□□ 0.3
ACTB-210ENST00000477812 SSX1Q16384 188 aa16.93■□□□□ 0.3
ACTB-210ENST00000477812 YIF1BQ5BJH7 314 aa16.93■□□□□ 0.3
ACTB-210ENST00000477812 LIPKQ5VXJ0 399 aa16.93■□□□□ 0.3
ACTB-210ENST00000477812 PHC2Q8IXK0 858 aa16.93■□□□□ 0.3
ACTB-210ENST00000477812 FTMTQ8N4E7 242 aa16.93■□□□□ 0.3
ACTB-210ENST00000477812 GPR148Q8TDV2 347 aa16.93■□□□□ 0.3
ACTB-210ENST00000477812 HPSE2Q8WWQ2 592 aa16.93■□□□□ 0.3
ACTB-210ENST00000477812 UFD1Q92890 307 aa16.93■□□□□ 0.3
ACTB-210ENST00000477812 DVL3Q92997 716 aaPredicted RBP16.93■□□□□ 0.3
ACTB-210ENST00000477812 C10orf35Q96D05 121 aa16.93■□□□□ 0.3
ACTB-210ENST00000477812 ITPKCQ96DU7 683 aa16.93■□□□□ 0.3
ACTB-210ENST00000477812 ELMOD3Q96FG2 381 aa16.93■□□□□ 0.3
ACTB-210ENST00000477812 ADAT1Q9BUB4 502 aaKnown RBP16.93■□□□□ 0.3
ACTB-210ENST00000477812 ENPP5Q9UJA9 477 aa16.93■□□□□ 0.3
ACTB-210ENST00000477812 CCDC168Q8NDH2 2452 aa16.92■□□□□ 0.3
ACTB-210ENST00000477812 A6NIN4 97 aa16.92■□□□□ 0.3
ACTB-210ENST00000477812 ZNF850A8MQ14 1090 aa16.92■□□□□ 0.3
ACTB-210ENST00000477812 GMDSO60547 372 aa16.92■□□□□ 0.3
ACTB-210ENST00000477812 PTBP3O95758 552 aaKnown RBP16.92■□□□□ 0.3
ACTB-210ENST00000477812 PRDX4Q13162 271 aa16.92■□□□□ 0.3
ACTB-210ENST00000477812 ASPHD2Q6ICH7 369 aa16.92■□□□□ 0.3
ACTB-210ENST00000477812 KCTD8Q6ZWB6 473 aa16.92■□□□□ 0.3
ACTB-210ENST00000477812 OR13C3Q8NGS6 347 aa16.92■□□□□ 0.3
ACTB-210ENST00000477812 MUL1Q969V5 352 aa16.92■□□□□ 0.3
ACTB-210ENST00000477812 CHST5Q9GZS9 411 aa16.92■□□□□ 0.3
ACTB-210ENST00000477812 RAB1BQ9H0U4 201 aa16.92■□□□□ 0.3
ACTB-210ENST00000477812 SF3B6Q9Y3B4 125 aaKnown RBP16.92■□□□□ 0.3
ACTB-210ENST00000477812 NOP16Q9Y3C1 178 aaKnown RBP16.92■□□□□ 0.3
ACTB-210ENST00000477812 MPC1Q9Y5U8 109 aa16.92■□□□□ 0.3
ACTB-210ENST00000477812 F5H5P2 479 aa16.91■□□□□ 0.3
ACTB-210ENST00000477812 LY6HO94772 140 aa16.91■□□□□ 0.3
ACTB-210ENST00000477812 HPXP02790 462 aa16.91■□□□□ 0.3
ACTB-210ENST00000477812 CD200P41217 278 aa16.91■□□□□ 0.3
ACTB-210ENST00000477812 EFNA4P52798 201 aa16.91■□□□□ 0.3
ACTB-210ENST00000477812 GP2P55259 537 aaKnown RBP16.91■□□□□ 0.3
ACTB-210ENST00000477812 CCL8P80075 99 aa16.91■□□□□ 0.3
ACTB-210ENST00000477812 MAB21L1Q13394 359 aa16.91■□□□□ 0.3
ACTB-210ENST00000477812 OR8G1Q15617 311 aa16.91■□□□□ 0.3
ACTB-210ENST00000477812 NEDD8Q15843 81 aa16.91■□□□□ 0.3
ACTB-210ENST00000477812 TSTQ16762 297 aaKnown RBP16.91■□□□□ 0.3
ACTB-210ENST00000477812 ARMCX4Q5H9R4 360 aa16.91■□□□□ 0.3
ACTB-210ENST00000477812 CLVS2Q5SYC1 327 aa16.91■□□□□ 0.3
ACTB-210ENST00000477812 SYT6Q5T7P8 510 aaPredicted RBP16.91■□□□□ 0.3
ACTB-210ENST00000477812 PARP16Q8N5Y8 322 aa16.91■□□□□ 0.3
ACTB-210ENST00000477812 NEU4Q8WWR8 484 aaPredicted RBP16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 103.9 ms