RNA–Protein interactions for RNA: ENST00000477547.6

SEC13-215, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 1,313 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-215ENST00000477547 UFD1Q92890 307 aa13.07□□□□□ -0.32
SEC13-215ENST00000477547 ADAT1Q9BUB4 502 aaKnown RBP13.07□□□□□ -0.32
SEC13-215ENST00000477547 PAPOLGQ9BWT3 736 aaKnown RBP13.07□□□□□ -0.32
SEC13-215ENST00000477547 TPK1Q9H3S4 243 aa13.07□□□□□ -0.32
SEC13-215ENST00000477547 FBXO9Q9UK97 447 aaPredicted RBP13.07□□□□□ -0.32
SEC13-215ENST00000477547 HHLA2Q9UM44 414 aa13.07□□□□□ -0.32
SEC13-215ENST00000477547 EDARQ9UNE0 448 aa13.07□□□□□ -0.32
SEC13-215ENST00000477547 PMF1-BGLAPU3KQ54 211 aa13.07□□□□□ -0.32
SEC13-215ENST00000477547 V9GYS6 101 aa13.07□□□□□ -0.32
SEC13-215ENST00000477547 A0A087WXM4 84 aa13.06□□□□□ -0.32
SEC13-215ENST00000477547 ZNF816-ZNF321PA0A0X1KG74 233 aa13.06□□□□□ -0.32
SEC13-215ENST00000477547 ANKRD30BLA7E2S9 258 aa13.06□□□□□ -0.32
SEC13-215ENST00000477547 H7C417 338 aa13.06□□□□□ -0.32
SEC13-215ENST00000477547 PCMT1P22061 227 aa13.06□□□□□ -0.32
SEC13-215ENST00000477547 PSMB9P28065 219 aa13.06□□□□□ -0.32
SEC13-215ENST00000477547 GNALP38405 381 aa13.06□□□□□ -0.32
SEC13-215ENST00000477547 LIPAP38571 399 aa13.06□□□□□ -0.32
SEC13-215ENST00000477547 MLLT11Q13015 90 aaPredicted RBP13.06□□□□□ -0.32
SEC13-215ENST00000477547 NEDD8Q15843 81 aa13.06□□□□□ -0.32
SEC13-215ENST00000477547 Q6ZR03 302 aa13.06□□□□□ -0.32
SEC13-215ENST00000477547 CCDC54Q8NEL0 328 aa13.06□□□□□ -0.32
SEC13-215ENST00000477547 OR10AD1Q8NGE0 317 aa13.06□□□□□ -0.32
SEC13-215ENST00000477547 OR51A4Q8NGJ6 313 aa13.06□□□□□ -0.32
SEC13-215ENST00000477547 OR13C3Q8NGS6 347 aa13.06□□□□□ -0.32
SEC13-215ENST00000477547 OR14K1Q8NGZ2 314 aa13.06□□□□□ -0.32
SEC13-215ENST00000477547 DVL3Q92997 716 aaPredicted RBP13.06□□□□□ -0.32
SEC13-215ENST00000477547 PIGTQ969N2 578 aa13.06□□□□□ -0.32
SEC13-215ENST00000477547 PGLYRP3Q96LB9 341 aa13.06□□□□□ -0.32
SEC13-215ENST00000477547 OPALINQ96PE5 141 aa13.06□□□□□ -0.32
SEC13-215ENST00000477547 MGLLQ99685 303 aa13.06□□□□□ -0.32
SEC13-215ENST00000477547 VRK1Q99986 396 aaPredicted RBP13.06□□□□□ -0.32
SEC13-215ENST00000477547 GSX1Q9H4S2 264 aaPredicted RBP13.06□□□□□ -0.32
SEC13-215ENST00000477547 VCX3AQ9NNX9 186 aa13.06□□□□□ -0.32
SEC13-215ENST00000477547 MRPL15Q9P015 296 aaKnown RBP13.06□□□□□ -0.32
SEC13-215ENST00000477547 PIGLQ9Y2B2 252 aa13.06□□□□□ -0.32
SEC13-215ENST00000477547 ARID1AO14497 2285 aa13.05□□□□□ -0.32
SEC13-215ENST00000477547 DHRS7CA6NNS2 312 aa13.05□□□□□ -0.32
SEC13-215ENST00000477547 C17orf100A8MU93 164 aa13.05□□□□□ -0.32
SEC13-215ENST00000477547 SPRY3O43610 288 aa13.05□□□□□ -0.32
SEC13-215ENST00000477547 LMX1BO60663 402 aa13.05□□□□□ -0.32
SEC13-215ENST00000477547 ZNF12P17014 697 aa13.05□□□□□ -0.32
SEC13-215ENST00000477547 CA6P23280 308 aa13.05□□□□□ -0.32
SEC13-215ENST00000477547 DNASE1P24855 282 aa13.05□□□□□ -0.32
SEC13-215ENST00000477547 RIPPLY1Q0D2K3 151 aa13.05□□□□□ -0.32
SEC13-215ENST00000477547 UBE2UQ5VVX9 321 aa13.05□□□□□ -0.32
SEC13-215ENST00000477547 LIPKQ5VXJ0 399 aa13.05□□□□□ -0.32
SEC13-215ENST00000477547 Q6ZSR3 168 aa13.05□□□□□ -0.32
SEC13-215ENST00000477547 ZCCHC24Q8N2G6 241 aaKnown RBP13.05□□□□□ -0.32
SEC13-215ENST00000477547 OR2Z1Q8NG97 314 aa13.05□□□□□ -0.32
SEC13-215ENST00000477547 OR13C5Q8NGS8 318 aa13.05□□□□□ -0.32
SEC13-215ENST00000477547 GHSRQ92847 366 aa13.05□□□□□ -0.32
SEC13-215ENST00000477547 ITFG2Q969R8 447 aa13.05□□□□□ -0.32
SEC13-215ENST00000477547 ELMOD3Q96FG2 381 aa13.05□□□□□ -0.32
SEC13-215ENST00000477547 SORCS2Q96PQ0 1159 aa13.05□□□□□ -0.32
SEC13-215ENST00000477547 SLC30A2Q9BRI3 323 aa13.05□□□□□ -0.32
SEC13-215ENST00000477547 MS4A5Q9H3V2 200 aa13.05□□□□□ -0.32
SEC13-215ENST00000477547 ISYNA1Q9NPH2 558 aa13.05□□□□□ -0.32
SEC13-215ENST00000477547 ENPP5Q9UJA9 477 aa13.05□□□□□ -0.32
SEC13-215ENST00000477547 ZNF281Q9Y2X9 895 aa13.05□□□□□ -0.32
SEC13-215ENST00000477547 NOP16Q9Y3C1 178 aaKnown RBP13.05□□□□□ -0.32
SEC13-215ENST00000477547 ACANP16112 2415 aa13.05□□□□□ -0.32
SEC13-215ENST00000477547 OVOL3O00110 214 aa13.04□□□□□ -0.32
SEC13-215ENST00000477547 MLNRO43193 412 aa13.04□□□□□ -0.32
SEC13-215ENST00000477547 PLPP2O43688 288 aa13.04□□□□□ -0.32
SEC13-215ENST00000477547 IGHV1-46P01743 117 aa13.04□□□□□ -0.32
SEC13-215ENST00000477547 ERCC1P07992 297 aaPredicted RBP13.04□□□□□ -0.32
SEC13-215ENST00000477547 RPSAP08865 295 aaKnown RBP13.04□□□□□ -0.32
SEC13-215ENST00000477547 SMIM18P0DKX4 95 aa13.04□□□□□ -0.32
SEC13-215ENST00000477547 ZNF20P17024 532 aa13.04□□□□□ -0.32
SEC13-215ENST00000477547 PRDX4Q13162 271 aa13.04□□□□□ -0.32
SEC13-215ENST00000477547 OR8G1Q15617 311 aa13.04□□□□□ -0.32
SEC13-215ENST00000477547 TSTQ16762 297 aaKnown RBP13.04□□□□□ -0.32
SEC13-215ENST00000477547 ZBTB37Q5TC79 503 aa13.04□□□□□ -0.32
SEC13-215ENST00000477547 KCTD8Q6ZWB6 473 aa13.04□□□□□ -0.32
SEC13-215ENST00000477547 OR13G1Q8NGZ3 307 aa13.04□□□□□ -0.32
SEC13-215ENST00000477547 GPR148Q8TDV2 347 aa13.04□□□□□ -0.32
SEC13-215ENST00000477547 SLC22A4Q9H015 551 aa13.04□□□□□ -0.32
SEC13-215ENST00000477547 TMEM100Q9NV29 134 aa13.04□□□□□ -0.32
SEC13-215ENST00000477547 ZDHHC8Q9ULC8 765 aa13.04□□□□□ -0.32
SEC13-215ENST00000477547 DHDHQ9UQ10 334 aa13.04□□□□□ -0.32
SEC13-215ENST00000477547 RHBDD3Q9Y3P4 386 aa13.04□□□□□ -0.32
SEC13-215ENST00000477547 MAP1AP78559 2803 aaPredicted RBP13.04□□□□□ -0.32
SEC13-215ENST00000477547 DYSFO75923 2080 aa13.04□□□□□ -0.32
SEC13-215ENST00000477547 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP13.03□□□□□ -0.32
SEC13-215ENST00000477547 HLA-DPB1P04440 258 aa13.03□□□□□ -0.32
SEC13-215ENST00000477547 CD1AP06126 327 aa13.03□□□□□ -0.32
SEC13-215ENST00000477547 CPEP16870 476 aa13.03□□□□□ -0.32
SEC13-215ENST00000477547 TNFSF4P23510 183 aa13.03□□□□□ -0.32
SEC13-215ENST00000477547 SOX2P48431 317 aa13.03□□□□□ -0.32
SEC13-215ENST00000477547 PCGF3Q3KNV8 242 aa13.03□□□□□ -0.32
SEC13-215ENST00000477547 YIF1BQ5BJH7 314 aa13.03□□□□□ -0.32
SEC13-215ENST00000477547 ARMCX4Q5H9R4 360 aa13.03□□□□□ -0.32
SEC13-215ENST00000477547 PLCXD3Q63HM9 321 aa13.03□□□□□ -0.32
SEC13-215ENST00000477547 ZDHHC23Q8IYP9 409 aa13.03□□□□□ -0.32
SEC13-215ENST00000477547 OR8S1Q8NH09 359 aa13.03□□□□□ -0.32
SEC13-215ENST00000477547 UBASH3BQ8TF42 649 aa13.03□□□□□ -0.32
SEC13-215ENST00000477547 PIGCQ92535 297 aa13.03□□□□□ -0.32
SEC13-215ENST00000477547 NINJ1Q92982 152 aa13.03□□□□□ -0.32
SEC13-215ENST00000477547 DIRC2Q96SL1 478 aa13.03□□□□□ -0.32
SEC13-215ENST00000477547 TMED9Q9BVK6 235 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms