RNA–Protein interactions for RNA: ENST00000474289.6

ECHDC1-214, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ECHDC1, Length 2,443 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-214ENST00000474289 ZNF84P51523 738 aa16.49■□□□□ 0.23
ECHDC1-214ENST00000474289 SLC35A1P78382 337 aa16.49■□□□□ 0.23
ECHDC1-214ENST00000474289 RSU1Q15404 277 aa16.49■□□□□ 0.23
ECHDC1-214ENST00000474289 GFI1BQ5VTD9 330 aa16.49■□□□□ 0.23
ECHDC1-214ENST00000474289 NUP54Q7Z3B4 507 aa16.49■□□□□ 0.23
ECHDC1-214ENST00000474289 RD3Q7Z3Z2 195 aa16.49■□□□□ 0.23
ECHDC1-214ENST00000474289 DCXRQ7Z4W1 244 aa16.49■□□□□ 0.23
ECHDC1-214ENST00000474289 ZNF610Q8N9Z0 462 aa16.49■□□□□ 0.23
ECHDC1-214ENST00000474289 NTNG2Q96CW9 530 aa16.49■□□□□ 0.23
ECHDC1-214ENST00000474289 SPACA5Q96QH8 159 aa16.49■□□□□ 0.23
ECHDC1-214ENST00000474289 OR10A5Q9H207 317 aa16.49■□□□□ 0.23
ECHDC1-214ENST00000474289 LSM5Q9Y4Y9 91 aaKnown RBP16.49■□□□□ 0.23
ECHDC1-214ENST00000474289 ATG2BQ96BY7 2078 aa16.49■□□□□ 0.23
ECHDC1-214ENST00000474289 A0A1B0GV50 99 aa16.49■□□□□ 0.23
ECHDC1-214ENST00000474289 A0A1W2PQU0 124 aa16.49■□□□□ 0.23
ECHDC1-214ENST00000474289 SEC14L6B5MCN3 397 aa16.49■□□□□ 0.23
ECHDC1-214ENST00000474289 HIST1H2BKO60814 126 aa16.49■□□□□ 0.23
ECHDC1-214ENST00000474289 KNG1P01042 644 aa16.49■□□□□ 0.23
ECHDC1-214ENST00000474289 HIST1H2BJP06899 126 aa16.49■□□□□ 0.23
ECHDC1-214ENST00000474289 CTSBP07858 339 aa16.49■□□□□ 0.23
ECHDC1-214ENST00000474289 GSTP1P09211 210 aaKnown RBP16.49■□□□□ 0.23
ECHDC1-214ENST00000474289 HIST1H2BOP23527 126 aa16.49■□□□□ 0.23
ECHDC1-214ENST00000474289 CHATP28329 748 aa16.49■□□□□ 0.23
ECHDC1-214ENST00000474289 HIST1H2BBP33778 126 aa16.49■□□□□ 0.23
ECHDC1-214ENST00000474289 SLC26A5P58743 744 aa16.49■□□□□ 0.23
ECHDC1-214ENST00000474289 HIST1H2BDP58876 126 aa16.49■□□□□ 0.23
ECHDC1-214ENST00000474289 HIST1H2BCP62807 126 aa16.49■□□□□ 0.23
ECHDC1-214ENST00000474289 GLO1Q04760 184 aa16.49■□□□□ 0.23
ECHDC1-214ENST00000474289 HIST2H2BEQ16778 126 aa16.49■□□□□ 0.23
ECHDC1-214ENST00000474289 ZNF674Q2M3X9 581 aa16.49■□□□□ 0.23
ECHDC1-214ENST00000474289 PDZD11Q5EBL8 140 aa16.49■□□□□ 0.23
ECHDC1-214ENST00000474289 HIST2H2BFQ5QNW6 126 aaPredicted RBP16.49■□□□□ 0.23
ECHDC1-214ENST00000474289 BAHD1Q8TBE0 780 aaPredicted RBP16.49■□□□□ 0.23
ECHDC1-214ENST00000474289 HIST1H2BHQ93079 126 aa16.49■□□□□ 0.23
ECHDC1-214ENST00000474289 HIST1H2BNQ99877 126 aa16.49■□□□□ 0.23
ECHDC1-214ENST00000474289 HIST1H2BMQ99879 126 aa16.49■□□□□ 0.23
ECHDC1-214ENST00000474289 PBDC1Q9BVG4 233 aa16.49■□□□□ 0.23
ECHDC1-214ENST00000474289 GPR61Q9BZJ8 451 aa16.49■□□□□ 0.23
ECHDC1-214ENST00000474289 FBLN5Q9UBX5 448 aa16.49■□□□□ 0.23
ECHDC1-214ENST00000474289 ZNF727A8MUV8 499 aa16.48■□□□□ 0.23
ECHDC1-214ENST00000474289 CHRM2P08172 466 aa16.48■□□□□ 0.23
ECHDC1-214ENST00000474289 SOD3P08294 240 aa16.48■□□□□ 0.23
ECHDC1-214ENST00000474289 AMY2BP19961 511 aa16.48■□□□□ 0.23
ECHDC1-214ENST00000474289 PTGER4P35408 488 aa16.48■□□□□ 0.23
ECHDC1-214ENST00000474289 SOHLH1Q5JUK2 328 aa16.48■□□□□ 0.23
ECHDC1-214ENST00000474289 LCN10Q6JVE6 187 aa16.48■□□□□ 0.23
ECHDC1-214ENST00000474289 SCARF2Q96GP6 870 aaPredicted RBP16.48■□□□□ 0.23
ECHDC1-214ENST00000474289 A0A087X0M5 115 aa16.48■□□□□ 0.23
ECHDC1-214ENST00000474289 A0A1B0GX30 115 aa16.48■□□□□ 0.23
ECHDC1-214ENST00000474289 WISP1O95388 367 aa16.48■□□□□ 0.23
ECHDC1-214ENST00000474289 MPIG6BO95866 241 aa16.48■□□□□ 0.23
ECHDC1-214ENST00000474289 PRH1P02810 166 aa16.48■□□□□ 0.23
ECHDC1-214ENST00000474289 SLC2A1P11166 492 aa16.48■□□□□ 0.23
ECHDC1-214ENST00000474289 FCARP24071 287 aa16.48■□□□□ 0.23
ECHDC1-214ENST00000474289 CTNNB1P35222 781 aa16.48■□□□□ 0.23
ECHDC1-214ENST00000474289 TMEM50BP56557 158 aa16.48■□□□□ 0.23
ECHDC1-214ENST00000474289 LSM6P62312 80 aaKnown RBP16.48■□□□□ 0.23
ECHDC1-214ENST00000474289 ERV3-1Q14264 604 aa16.48■□□□□ 0.23
ECHDC1-214ENST00000474289 SSX2Q16385 188 aa16.48■□□□□ 0.23
ECHDC1-214ENST00000474289 KHDC3LQ587J8 217 aa16.48■□□□□ 0.23
ECHDC1-214ENST00000474289 C1orf140Q5VVS0 124 aa16.48■□□□□ 0.23
ECHDC1-214ENST00000474289 ZNF343Q6P1L6 599 aa16.48■□□□□ 0.23
ECHDC1-214ENST00000474289 TMEM156Q8N614 296 aa16.48■□□□□ 0.23
ECHDC1-214ENST00000474289 RHBDD1Q8TEB9 315 aa16.48■□□□□ 0.23
ECHDC1-214ENST00000474289 Q8WTZ3 238 aa16.48■□□□□ 0.23
ECHDC1-214ENST00000474289 RELTQ969Z4 430 aa16.48■□□□□ 0.23
ECHDC1-214ENST00000474289 TGIF2Q9GZN2 237 aa16.48■□□□□ 0.23
ECHDC1-214ENST00000474289 SH3BGRL3Q9H299 93 aa16.48■□□□□ 0.23
ECHDC1-214ENST00000474289 PRO1933Q9H354 126 aa16.48■□□□□ 0.23
ECHDC1-214ENST00000474289 ZNF726A6NNF4 738 aa16.47■□□□□ 0.23
ECHDC1-214ENST00000474289 SCDO00767 359 aa16.47■□□□□ 0.23
ECHDC1-214ENST00000474289 TERTO14746 1132 aaKnown RBP16.47■□□□□ 0.23
ECHDC1-214ENST00000474289 SLC31A1O15431 190 aa16.47■□□□□ 0.23
ECHDC1-214ENST00000474289 CXCL1P09341 107 aa16.47■□□□□ 0.23
ECHDC1-214ENST00000474289 HNRNPA1P09651 372 aaKnown RBP eCLIP16.47■□□□□ 0.23
ECHDC1-214ENST00000474289 CRABP1P29762 137 aa16.47■□□□□ 0.23
ECHDC1-214ENST00000474289 ZNF93P35789 620 aaPredicted RBP16.47■□□□□ 0.23
ECHDC1-214ENST00000474289 PPP1CCP36873 323 aaKnown RBP16.47■□□□□ 0.23
ECHDC1-214ENST00000474289 PKIAP61925 76 aa16.47■□□□□ 0.23
ECHDC1-214ENST00000474289 RPS21P63220 83 aaKnown RBP16.47■□□□□ 0.23
ECHDC1-214ENST00000474289 FNDC9Q8TBE3 224 aa16.47■□□□□ 0.23
ECHDC1-214ENST00000474289 JSRP1Q96MG2 331 aaPredicted RBP16.47■□□□□ 0.23
ECHDC1-214ENST00000474289 FOXQ1Q9C009 403 aa16.47■□□□□ 0.23
ECHDC1-214ENST00000474289 OR11A1Q9GZK7 315 aa16.47■□□□□ 0.23
ECHDC1-214ENST00000474289 TWSG1Q9GZX9 223 aa16.47■□□□□ 0.23
ECHDC1-214ENST00000474289 TXNIPQ9H3M7 391 aa16.47■□□□□ 0.23
ECHDC1-214ENST00000474289 WFDC1Q9HC57 220 aa16.47■□□□□ 0.23
ECHDC1-214ENST00000474289 C1orf123Q9NWV4 160 aa16.47■□□□□ 0.23
ECHDC1-214ENST00000474289 TUBD1Q9UJT1 453 aa16.47■□□□□ 0.23
ECHDC1-214ENST00000474289 B3GALT5Q9Y2C3 310 aa16.47■□□□□ 0.23
ECHDC1-214ENST00000474289 CPAMD8Q8IZJ3 1885 aa16.47■□□□□ 0.23
ECHDC1-214ENST00000474289 BTBD17A6NE02 478 aa16.47■□□□□ 0.23
ECHDC1-214ENST00000474289 C17orf51A8MQB3 221 aa16.47■□□□□ 0.23
ECHDC1-214ENST00000474289 RPL36A-HNRNPH2H7BZ11 118 aa16.47■□□□□ 0.23
ECHDC1-214ENST00000474289 BCKDHBP21953 392 aa16.47■□□□□ 0.23
ECHDC1-214ENST00000474289 GABRA4P48169 554 aa16.47■□□□□ 0.23
ECHDC1-214ENST00000474289 TDGQ13569 410 aa16.47■□□□□ 0.23
ECHDC1-214ENST00000474289 ELOBQ15370 118 aa16.47■□□□□ 0.23
ECHDC1-214ENST00000474289 SGCBQ16585 318 aa16.47■□□□□ 0.23
ECHDC1-214ENST00000474289 HIST3H2BBQ8N257 126 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 78 ms