RNA–Protein interactions for RNA: ENST00000473598.6

LMNA-213, Transcript of lamin A/C, humanhuman

TSL 2 BASIC

Gene LMNA, Length 2,015 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-213ENST00000473598 SPOCK3Q9BQ16 436 aa13.01□□□□□ -0.33
LMNA-213ENST00000473598 RNF122Q9H9V4 155 aa13.01□□□□□ -0.33
LMNA-213ENST00000473598 BCO1Q9HAY6 547 aa13.01□□□□□ -0.33
LMNA-213ENST00000473598 EXTL2Q9UBQ6 330 aa13.01□□□□□ -0.33
LMNA-213ENST00000473598 MED12LQ86YW9 2145 aa13.01□□□□□ -0.33
LMNA-213ENST00000473598 OR14I1A6ND48 311 aa13.01□□□□□ -0.33
LMNA-213ENST00000473598 ZNF724A8MTY0 619 aa13.01□□□□□ -0.33
LMNA-213ENST00000473598 ZNF593O00488 134 aaPredicted RBP13.01□□□□□ -0.33
LMNA-213ENST00000473598 C1QL1O75973 258 aa13.01□□□□□ -0.33
LMNA-213ENST00000473598 TOXO94900 526 aa13.01□□□□□ -0.33
LMNA-213ENST00000473598 RNF224P0DH78 156 aa13.01□□□□□ -0.33
LMNA-213ENST00000473598 PTGFRP43088 359 aa13.01□□□□□ -0.33
LMNA-213ENST00000473598 RIDAP52758 137 aaKnown RBP13.01□□□□□ -0.33
LMNA-213ENST00000473598 RAB5BP61020 215 aa13.01□□□□□ -0.33
LMNA-213ENST00000473598 ADAM8P78325 824 aa13.01□□□□□ -0.33
LMNA-213ENST00000473598 MEP1BQ16820 701 aa13.01□□□□□ -0.33
LMNA-213ENST00000473598 C10orf128Q5T292 105 aa13.01□□□□□ -0.33
LMNA-213ENST00000473598 FAM180AQ6UWF9 173 aa13.01□□□□□ -0.33
LMNA-213ENST00000473598 ADGRE4PQ86SQ3 457 aa13.01□□□□□ -0.33
LMNA-213ENST00000473598 SPICQ8N5J4 248 aa13.01□□□□□ -0.33
LMNA-213ENST00000473598 Q8NA96 180 aa13.01□□□□□ -0.33
LMNA-213ENST00000473598 OTOSQ8NHW6 89 aa13.01□□□□□ -0.33
LMNA-213ENST00000473598 TTTY10Q9BZA0 68 aa13.01□□□□□ -0.33
LMNA-213ENST00000473598 ALX4Q9H161 411 aaPredicted RBP13.01□□□□□ -0.33
LMNA-213ENST00000473598 CYSLTR2Q9NS75 346 aa13.01□□□□□ -0.33
LMNA-213ENST00000473598 ST6GALNAC2Q9UJ37 374 aa13.01□□□□□ -0.33
LMNA-213ENST00000473598 LAMP5Q9UJQ1 280 aa13.01□□□□□ -0.33
LMNA-213ENST00000473598 TMEM14AQ9Y6G1 99 aa13.01□□□□□ -0.33
LMNA-213ENST00000473598 ARHGAP21Q5T5U3 1957 aa13□□□□□ -0.33
LMNA-213ENST00000473598 SLC22A20A6NK97 555 aa13□□□□□ -0.33
LMNA-213ENST00000473598 HMSDA8MTL9 139 aa13□□□□□ -0.33
LMNA-213ENST00000473598 ZNHIT1O43257 154 aa13□□□□□ -0.33
LMNA-213ENST00000473598 NCR1O76036 304 aa13□□□□□ -0.33
LMNA-213ENST00000473598 HEXAP06865 529 aa13□□□□□ -0.33
LMNA-213ENST00000473598 ZNF823P16415 610 aa13□□□□□ -0.33
LMNA-213ENST00000473598 ALOX5APP20292 161 aa13□□□□□ -0.33
LMNA-213ENST00000473598 RPS27P42677 84 aaKnown RBP13□□□□□ -0.33
LMNA-213ENST00000473598 SPCS3P61009 180 aa13□□□□□ -0.33
LMNA-213ENST00000473598 RAB4BP61018 213 aa13□□□□□ -0.33
LMNA-213ENST00000473598 DEFA6Q01524 100 aa13□□□□□ -0.33
LMNA-213ENST00000473598 SLC3A1Q07837 685 aa13□□□□□ -0.33
LMNA-213ENST00000473598 GUCA2BQ16661 112 aa13□□□□□ -0.33
LMNA-213ENST00000473598 TP53I3Q53FA7 332 aa13□□□□□ -0.33
LMNA-213ENST00000473598 OTPQ5XKR4 325 aa13□□□□□ -0.33
LMNA-213ENST00000473598 ZSCAN2Q7Z7L9 614 aaPredicted RBP13□□□□□ -0.33
LMNA-213ENST00000473598 LRRC28Q86X40 367 aaPredicted RBP13□□□□□ -0.33
LMNA-213ENST00000473598 LDLRAD3Q86YD5 345 aa13□□□□□ -0.33
LMNA-213ENST00000473598 TUSC5Q8IXB3 177 aa13□□□□□ -0.33
LMNA-213ENST00000473598 ABHD4Q8TB40 342 aa13□□□□□ -0.33
LMNA-213ENST00000473598 SNX33Q8WV41 574 aa13□□□□□ -0.33
LMNA-213ENST00000473598 HSD17B8Q92506 261 aa13□□□□□ -0.33
LMNA-213ENST00000473598 PELI1Q96FA3 418 aa13□□□□□ -0.33
LMNA-213ENST00000473598 ZFP57Q9NU63 452 aa13□□□□□ -0.33
LMNA-213ENST00000473598 KLHDC2Q9Y2U9 406 aa13□□□□□ -0.33
LMNA-213ENST00000473598 COL6A6A6NMZ7 2263 aa13□□□□□ -0.33
LMNA-213ENST00000473598 RELNP78509 3460 aa13□□□□□ -0.33
LMNA-213ENST00000473598 C5orf52A6NGY3 159 aa13□□□□□ -0.33
LMNA-213ENST00000473598 DISC1C4P0D8 188 aa13□□□□□ -0.33
LMNA-213ENST00000473598 OGG1O15527 345 aa13□□□□□ -0.33
LMNA-213ENST00000473598 LANCL1O43813 399 aa13□□□□□ -0.33
LMNA-213ENST00000473598 SERPINA3P01011 423 aa13□□□□□ -0.33
LMNA-213ENST00000473598 FCGR2AP12318 317 aa13□□□□□ -0.33
LMNA-213ENST00000473598 PCK2Q16822 640 aa13□□□□□ -0.33
LMNA-213ENST00000473598 CDNFQ49AH0 187 aa13□□□□□ -0.33
LMNA-213ENST00000473598 OR2B11Q5JQS5 317 aa13□□□□□ -0.33
LMNA-213ENST00000473598 FAM74A1Q5RGS3 127 aa13□□□□□ -0.33
LMNA-213ENST00000473598 GSG1LQ6UXU4 331 aa13□□□□□ -0.33
LMNA-213ENST00000473598 TMUB2Q71RG4 321 aa13□□□□□ -0.33
LMNA-213ENST00000473598 NR2C2APQ86WQ0 139 aa13□□□□□ -0.33
LMNA-213ENST00000473598 MCEMP1Q8IX19 187 aa13□□□□□ -0.33
LMNA-213ENST00000473598 GHSRQ92847 366 aa13□□□□□ -0.33
LMNA-213ENST00000473598 MS4A3Q96HJ5 214 aa13□□□□□ -0.33
LMNA-213ENST00000473598 TSNAXQ99598 290 aaKnown RBP13□□□□□ -0.33
LMNA-213ENST00000473598 CACNG6Q9BXT2 260 aa13□□□□□ -0.33
LMNA-213ENST00000473598 CLCF1Q9UBD9 225 aa13□□□□□ -0.33
LMNA-213ENST00000473598 KCNG2Q9UJ96 466 aa13□□□□□ -0.33
LMNA-213ENST00000473598 PRR32B1ATL7 298 aa12.99□□□□□ -0.33
LMNA-213ENST00000473598 MAGEB4O15481 346 aaPredicted RBP12.99□□□□□ -0.33
LMNA-213ENST00000473598 MRPL33O75394 65 aaKnown RBP12.99□□□□□ -0.33
LMNA-213ENST00000473598 CRYBA1P05813 215 aa12.99□□□□□ -0.33
LMNA-213ENST00000473598 SPARCP09486 303 aa12.99□□□□□ -0.33
LMNA-213ENST00000473598 MAPK3P27361 379 aaPredicted RBP12.99□□□□□ -0.33
LMNA-213ENST00000473598 KLRB1Q12918 225 aa12.99□□□□□ -0.33
LMNA-213ENST00000473598 SFRP5Q5T4F7 317 aa12.99□□□□□ -0.33
LMNA-213ENST00000473598 ZNF684Q5T5D7 378 aa12.99□□□□□ -0.33
LMNA-213ENST00000473598 ZNF324BQ6AW86 544 aaPredicted RBP12.99□□□□□ -0.33
LMNA-213ENST00000473598 RBMS3Q6XE24 437 aaKnown RBP12.99□□□□□ -0.33
LMNA-213ENST00000473598 THEM6Q8WUY1 208 aa12.99□□□□□ -0.33
LMNA-213ENST00000473598 C11orf40Q8WZ69 217 aa12.99□□□□□ -0.33
LMNA-213ENST00000473598 ULBP2Q9BZM5 246 aa12.99□□□□□ -0.33
LMNA-213ENST00000473598 SEC61A2Q9H9S3 476 aa12.99□□□□□ -0.33
LMNA-213ENST00000473598 PARPBPQ9NWS1 579 aa12.99□□□□□ -0.33
LMNA-213ENST00000473598 TREM2Q9NZC2 230 aa12.99□□□□□ -0.33
LMNA-213ENST00000473598 DHHO43323 396 aa12.98□□□□□ -0.33
LMNA-213ENST00000473598 UPK3AO75631 287 aa12.98□□□□□ -0.33
LMNA-213ENST00000473598 ELK1P19419 428 aa12.98□□□□□ -0.33
LMNA-213ENST00000473598 CDAP32320 146 aa12.98□□□□□ -0.33
LMNA-213ENST00000473598 SIRPAP78324 504 aa12.98□□□□□ -0.33
LMNA-213ENST00000473598 CDK5R1Q15078 307 aa12.98□□□□□ -0.33
LMNA-213ENST00000473598 KRTCAP3Q53RY4 240 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms