RNA–Protein interactions for RNA: ENST00000473565.5

CLK1-210, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best)

Gene CLK1, Length 3,208 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-210ENST00000473565 BEST4Q8NFU0 473 aa5.41□□□□□ -1.54
CLK1-210ENST00000473565 EXTL1Q92935 676 aa5.41□□□□□ -1.54
CLK1-210ENST00000473565 C1orf147Q96MC9 270 aaPredicted RBP5.41□□□□□ -1.54
CLK1-210ENST00000473565 CACNG6Q9BXT2 260 aa5.41□□□□□ -1.54
CLK1-210ENST00000473565 POFUT1Q9H488 388 aa5.41□□□□□ -1.54
CLK1-210ENST00000473565 ELL3Q9HB65 397 aaPredicted RBP5.41□□□□□ -1.54
CLK1-210ENST00000473565 HRASLSQ9HDD0 168 aa5.41□□□□□ -1.54
CLK1-210ENST00000473565 LHX6Q9UPM6 363 aa5.41□□□□□ -1.54
CLK1-210ENST00000473565 CADP27708 2225 aa5.41□□□□□ -1.54
CLK1-210ENST00000473565 RPL36A-HNRNPH2H7BZ11 118 aa5.4□□□□□ -1.54
CLK1-210ENST00000473565 CTDSPLO15194 276 aa5.4□□□□□ -1.54
CLK1-210ENST00000473565 SPRY1O43609 319 aaPredicted RBP5.4□□□□□ -1.54
CLK1-210ENST00000473565 GNB3P16520 340 aa5.4□□□□□ -1.54
CLK1-210ENST00000473565 QRFPP83859 136 aa5.4□□□□□ -1.54
CLK1-210ENST00000473565 FAM3AP98173 230 aa5.4□□□□□ -1.54
CLK1-210ENST00000473565 ECH1Q13011 328 aa5.4□□□□□ -1.54
CLK1-210ENST00000473565 PCGF3Q3KNV8 242 aa5.4□□□□□ -1.54
CLK1-210ENST00000473565 KRTAP27-1Q3LI81 207 aa5.4□□□□□ -1.54
CLK1-210ENST00000473565 FBXW9Q5XUX1 488 aa5.4□□□□□ -1.54
CLK1-210ENST00000473565 SEMA6DQ8NFY4 1073 aa5.4□□□□□ -1.54
CLK1-210ENST00000473565 OR52H1Q8NGJ2 320 aa5.4□□□□□ -1.54
CLK1-210ENST00000473565 CHAC2Q8WUX2 184 aa5.4□□□□□ -1.54
CLK1-210ENST00000473565 ABHD17AQ96GS6 310 aa5.4□□□□□ -1.54
CLK1-210ENST00000473565 CHST5Q9GZS9 411 aa5.4□□□□□ -1.54
CLK1-210ENST00000473565 ZNF629Q9UEG4 869 aaPredicted RBP5.4□□□□□ -1.54
CLK1-210ENST00000473565 ING4Q9UNL4 249 aa5.4□□□□□ -1.54
CLK1-210ENST00000473565 IGKV1-27A0A075B6S5 117 aa5.4□□□□□ -1.54
CLK1-210ENST00000473565 C3orf80F5H4A9 247 aa5.4□□□□□ -1.54
CLK1-210ENST00000473565 RAB27BO00194 218 aa5.4□□□□□ -1.54
CLK1-210ENST00000473565 AQP7O14520 342 aa5.4□□□□□ -1.54
CLK1-210ENST00000473565 SOCS1O15524 211 aa5.4□□□□□ -1.54
CLK1-210ENST00000473565 CRTAPO75718 401 aaPredicted RBP5.4□□□□□ -1.54
CLK1-210ENST00000473565 CCNKO75909 580 aa5.4□□□□□ -1.54
CLK1-210ENST00000473565 GABRA1P14867 456 aa5.4□□□□□ -1.54
CLK1-210ENST00000473565 SERPINA2P20848 420 aa5.4□□□□□ -1.54
CLK1-210ENST00000473565 IGHV1-2P23083 117 aa5.4□□□□□ -1.54
CLK1-210ENST00000473565 STOMP27105 288 aa5.4□□□□□ -1.54
CLK1-210ENST00000473565 THBS4P35443 961 aa5.4□□□□□ -1.54
CLK1-210ENST00000473565 GSK3AP49840 483 aa5.4□□□□□ -1.54
CLK1-210ENST00000473565 SPATA46Q5T0L3 261 aa5.4□□□□□ -1.54
CLK1-210ENST00000473565 TFAP2EQ6VUC0 442 aa5.4□□□□□ -1.54
CLK1-210ENST00000473565 Q6ZS92 163 aa5.4□□□□□ -1.54
CLK1-210ENST00000473565 PGAP1Q75T13 922 aa5.4□□□□□ -1.54
CLK1-210ENST00000473565 MDP1Q86V88 176 aa5.4□□□□□ -1.54
CLK1-210ENST00000473565 BHLHE23Q8NDY6 225 aa5.4□□□□□ -1.54
CLK1-210ENST00000473565 OR1K1Q8NGR3 316 aa5.4□□□□□ -1.54
CLK1-210ENST00000473565 NUDCD2Q8WVJ2 157 aa5.4□□□□□ -1.54
CLK1-210ENST00000473565 TNFAIP8L1Q8WVP5 186 aa5.4□□□□□ -1.54
CLK1-210ENST00000473565 ZC3HAV1LQ96H79 300 aaKnown RBP5.4□□□□□ -1.54
CLK1-210ENST00000473565 SELENOIQ9C0D9 397 aa5.4□□□□□ -1.54
CLK1-210ENST00000473565 ZNF581Q9P0T4 197 aa5.4□□□□□ -1.54
CLK1-210ENST00000473565 RBMX2Q9Y388 322 aaKnown RBP5.4□□□□□ -1.54
CLK1-210ENST00000473565 ESPL1Q14674 2120 aa5.4□□□□□ -1.55
CLK1-210ENST00000473565 ICE1Q9Y2F5 2266 aa5.4□□□□□ -1.55
CLK1-210ENST00000473565 APOC1P02654 83 aa5.4□□□□□ -1.55
CLK1-210ENST00000473565 TCRBP04435 133 aa5.4□□□□□ -1.55
CLK1-210ENST00000473565 CSN2P05814 226 aa5.4□□□□□ -1.55
CLK1-210ENST00000473565 MPGP29372 298 aa5.4□□□□□ -1.55
CLK1-210ENST00000473565 PRSS3P35030 304 aa5.4□□□□□ -1.55
CLK1-210ENST00000473565 MNDAP41218 407 aa5.4□□□□□ -1.55
CLK1-210ENST00000473565 KIR2DL2P43627 348 aaPredicted RBP5.4□□□□□ -1.55
CLK1-210ENST00000473565 OR3A2P47893 321 aa5.4□□□□□ -1.55
CLK1-210ENST00000473565 CD83Q01151 205 aa5.4□□□□□ -1.55
CLK1-210ENST00000473565 TBRG1Q3YBR2 411 aa5.4□□□□□ -1.55
CLK1-210ENST00000473565 ALKBH2Q6NS38 261 aa5.4□□□□□ -1.55
CLK1-210ENST00000473565 Q6ZTK2 550 aa5.4□□□□□ -1.55
CLK1-210ENST00000473565 GVQW1Q8N7I0 195 aa5.4□□□□□ -1.55
CLK1-210ENST00000473565 OR4S1Q8NGB4 309 aa5.4□□□□□ -1.55
CLK1-210ENST00000473565 SSC4DQ8WTU2 575 aa5.4□□□□□ -1.55
CLK1-210ENST00000473565 PIGCQ92535 297 aa5.4□□□□□ -1.55
CLK1-210ENST00000473565 BCL2L2Q92843 193 aaPredicted RBP5.4□□□□□ -1.55
CLK1-210ENST00000473565 SARAFQ96BY9 339 aa5.4□□□□□ -1.55
CLK1-210ENST00000473565 FOXRED1Q96CU9 486 aaPredicted RBP5.4□□□□□ -1.55
CLK1-210ENST00000473565 SEH1LQ96EE3 360 aa5.4□□□□□ -1.55
CLK1-210ENST00000473565 GMPPAQ96IJ6 420 aaPredicted RBP5.4□□□□□ -1.55
CLK1-210ENST00000473565 FYTTD1Q96QD9 318 aaKnown RBP5.4□□□□□ -1.55
CLK1-210ENST00000473565 MARVELD1Q9BSK0 173 aa5.4□□□□□ -1.55
CLK1-210ENST00000473565 OR10A4Q9H209 315 aa5.4□□□□□ -1.55
CLK1-210ENST00000473565 DPAGT1Q9H3H5 408 aa5.4□□□□□ -1.55
CLK1-210ENST00000473565 PTTG3PQ9NZH4 202 aa5.4□□□□□ -1.55
CLK1-210ENST00000473565 DKK4Q9UBT3 224 aa5.4□□□□□ -1.55
CLK1-210ENST00000473565 GPR160Q9UJ42 338 aa5.4□□□□□ -1.55
CLK1-210ENST00000473565 WASF3Q9UPY6 502 aa5.4□□□□□ -1.55
CLK1-210ENST00000473565 TP53TG5Q9Y2B4 290 aa5.4□□□□□ -1.55
CLK1-210ENST00000473565 STARD10Q9Y365 291 aa5.4□□□□□ -1.55
CLK1-210ENST00000473565 ZNF175Q9Y473 711 aa5.4□□□□□ -1.55
CLK1-210ENST00000473565 hCG_38984A0A1B0GV85 526 aa5.39□□□□□ -1.55
CLK1-210ENST00000473565 ANKRD20A5PA0PJZ0 165 aa5.39□□□□□ -1.55
CLK1-210ENST00000473565 CENPXA8MT69 81 aa5.39□□□□□ -1.55
CLK1-210ENST00000473565 TMEM14DPA8MWL7 114 aa5.39□□□□□ -1.55
CLK1-210ENST00000473565 H7C417 338 aa5.39□□□□□ -1.55
CLK1-210ENST00000473565 M0QYG6 137 aa5.39□□□□□ -1.55
CLK1-210ENST00000473565 CDK2AP1O14519 115 aa5.39□□□□□ -1.55
CLK1-210ENST00000473565 CDC14BO60729 498 aa5.39□□□□□ -1.55
CLK1-210ENST00000473565 LILRA1O75019 489 aa5.39□□□□□ -1.55
CLK1-210ENST00000473565 SS18L1O75177 396 aaPredicted RBP5.39□□□□□ -1.55
CLK1-210ENST00000473565 MTRF1O75570 445 aaKnown RBP5.39□□□□□ -1.55
CLK1-210ENST00000473565 RBBP9O75884 186 aa5.39□□□□□ -1.55
CLK1-210ENST00000473565 BPNT1O95861 308 aa5.39□□□□□ -1.55
CLK1-210ENST00000473565 CD3DP04234 171 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms