RNA–Protein interactions for RNA: ENST00000471894.1

PUM1-208, Transcript of pumilio RNA binding family member 1, human

TSL 3

Gene PUM1, Length 812 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PUM1-208	ENST00000471894	TAS2R4	Q9NYW5	299 aa		9.04	□□□□□ -0.96
PUM1-208	ENST00000471894	PURG	Q9UJV8	347 aa	Known RBP	9.04	□□□□□ -0.96
PUM1-208	ENST00000471894	FOXJ3	Q9UPW0	622 aa		9.04	□□□□□ -0.96
PUM1-208	ENST00000471894	RHBDD3	Q9Y3P4	386 aa		9.04	□□□□□ -0.96
PUM1-208	ENST00000471894	ANKHD1	Q8IWZ3	2542 aa	Known RBP	9.04	□□□□□ -0.96
PUM1-208	ENST00000471894	UBR5	O95071	2799 aa	Predicted RBP	9.03	□□□□□ -0.96
PUM1-208	ENST00000471894	ADGRG4	Q8IZF6	3080 aa		9.03	□□□□□ -0.96
PUM1-208	ENST00000471894	TRAV8-7	A0A075B6U6	113 aa		9.03	□□□□□ -0.96
PUM1-208	ENST00000471894	CLEC18A	A5D8T8	446 aa		9.03	□□□□□ -0.96
PUM1-208	ENST00000471894	IQCF6	A8MYZ5	107 aa		9.03	□□□□□ -0.96
PUM1-208	ENST00000471894	GMDS	O60547	372 aa		9.03	□□□□□ -0.96
PUM1-208	ENST00000471894	PLAU	P00749	431 aa		9.03	□□□□□ -0.96
PUM1-208	ENST00000471894	NRAS	P01111	189 aa		9.03	□□□□□ -0.96
PUM1-208	ENST00000471894	MAS1	P04201	325 aa		9.03	□□□□□ -0.96
PUM1-208	ENST00000471894	OCM	P0CE72	109 aa	Predicted RBP	9.03	□□□□□ -0.96
PUM1-208	ENST00000471894	ZNF250	P15622	560 aa		9.03	□□□□□ -0.96
PUM1-208	ENST00000471894	RAB3A	P20336	220 aa		9.03	□□□□□ -0.96
PUM1-208	ENST00000471894	KITLG	P21583	273 aa		9.03	□□□□□ -0.96
PUM1-208	ENST00000471894	KLF3	P57682	345 aa	Predicted RBP	9.03	□□□□□ -0.96
PUM1-208	ENST00000471894	MXD1	Q05195	221 aa		9.03	□□□□□ -0.96
PUM1-208	ENST00000471894	SPCS2	Q15005	226 aa		9.03	□□□□□ -0.96
PUM1-208	ENST00000471894	DAZAP2	Q15038	168 aa	Predicted RBP	9.03	□□□□□ -0.96
PUM1-208	ENST00000471894	ALKBH6	Q3KRA9	238 aa		9.03	□□□□□ -0.96
PUM1-208	ENST00000471894	CLEC18B	Q6UXF7	455 aa		9.03	□□□□□ -0.96
PUM1-208	ENST00000471894	MOB3C	Q70IA8	216 aa		9.03	□□□□□ -0.96
PUM1-208	ENST00000471894	UTS2B	Q765I0	119 aa		9.03	□□□□□ -0.96
PUM1-208	ENST00000471894	LRP11	Q86VZ4	500 aa		9.03	□□□□□ -0.96
PUM1-208	ENST00000471894	TPRA1	Q86W33	373 aa		9.03	□□□□□ -0.96
PUM1-208	ENST00000471894	CLEC18C	Q8NCF0	446 aa		9.03	□□□□□ -0.96
PUM1-208	ENST00000471894	OR1M1	Q8NGA1	313 aa		9.03	□□□□□ -0.96
PUM1-208	ENST00000471894	NEUROG1	Q92886	237 aa		9.03	□□□□□ -0.96
PUM1-208	ENST00000471894	PIGT	Q969N2	578 aa		9.03	□□□□□ -0.96
PUM1-208	ENST00000471894	HS3ST6	Q96QI5	342 aa		9.03	□□□□□ -0.96
PUM1-208	ENST00000471894	SPOCK3	Q9BQ16	436 aa		9.03	□□□□□ -0.96
PUM1-208	ENST00000471894	SYT3	Q9BQG1	590 aa		9.03	□□□□□ -0.96
PUM1-208	ENST00000471894	PAPOLG	Q9BWT3	736 aa	Known RBP	9.03	□□□□□ -0.96
PUM1-208	ENST00000471894	DCSTAMP	Q9H295	470 aa		9.03	□□□□□ -0.96
PUM1-208	ENST00000471894	TPK1	Q9H3S4	243 aa		9.03	□□□□□ -0.96
PUM1-208	ENST00000471894	ZNF442	Q9H7R0	627 aa		9.03	□□□□□ -0.96
PUM1-208	ENST00000471894	GPR173	Q9NS66	373 aa		9.03	□□□□□ -0.96
PUM1-208	ENST00000471894	KCNN3	Q9UGI6	736 aa		9.03	□□□□□ -0.96
PUM1-208	ENST00000471894	ICE1	Q9Y2F5	2266 aa		9.03	□□□□□ -0.96
PUM1-208	ENST00000471894	USP9X	Q93008	2570 aa	Predicted RBP	9.03	□□□□□ -0.96
PUM1-208	ENST00000471894	DOPEY1	Q5JWR5	2465 aa		9.03	□□□□□ -0.96
PUM1-208	ENST00000471894	SHISA3	A0PJX4	238 aa		9.02	□□□□□ -0.97
PUM1-208	ENST00000471894		A1L4Q6	167 aa		9.02	□□□□□ -0.97
PUM1-208	ENST00000471894	MEGF11	A6BM72	1044 aa		9.02	□□□□□ -0.97
PUM1-208	ENST00000471894	ZNF850	A8MQ14	1090 aa		9.02	□□□□□ -0.97
PUM1-208	ENST00000471894		E7EQL1	145 aa		9.02	□□□□□ -0.97
PUM1-208	ENST00000471894	PDCD5	O14737	125 aa		9.02	□□□□□ -0.97
PUM1-208	ENST00000471894	MAGEB3	O15480	346 aa		9.02	□□□□□ -0.97
PUM1-208	ENST00000471894	LILRA1	O75019	489 aa		9.02	□□□□□ -0.97
PUM1-208	ENST00000471894	CST4	P01036	141 aa		9.02	□□□□□ -0.97
PUM1-208	ENST00000471894	IL1A	P01583	271 aa		9.02	□□□□□ -0.97
PUM1-208	ENST00000471894	IGHV3-13	P01766	116 aa		9.02	□□□□□ -0.97
PUM1-208	ENST00000471894	OR4A8	P0C604	315 aa		9.02	□□□□□ -0.97
PUM1-208	ENST00000471894	CLEC2L	P0C7M8	214 aa		9.02	□□□□□ -0.97
PUM1-208	ENST00000471894	IGFBP3	P17936	291 aa	Predicted RBP	9.02	□□□□□ -0.97
PUM1-208	ENST00000471894	ATF1	P18846	271 aa		9.02	□□□□□ -0.97
PUM1-208	ENST00000471894	FST	P19883	344 aa		9.02	□□□□□ -0.97
PUM1-208	ENST00000471894	RAB3B	P20337	219 aa		9.02	□□□□□ -0.97
PUM1-208	ENST00000471894	LOX	P28300	417 aa	Predicted RBP	9.02	□□□□□ -0.97
PUM1-208	ENST00000471894	RPS19	P39019	145 aa	Known RBP	9.02	□□□□□ -0.97
PUM1-208	ENST00000471894	UBE2V2	Q15819	145 aa		9.02	□□□□□ -0.97
PUM1-208	ENST00000471894	MOG	Q16653	247 aa		9.02	□□□□□ -0.97
PUM1-208	ENST00000471894	MSMP	Q1L6U9	139 aa		9.02	□□□□□ -0.97
PUM1-208	ENST00000471894	DMRTC1	Q5HYR2	192 aa		9.02	□□□□□ -0.97
PUM1-208	ENST00000471894	CEP78	Q5JTW2	689 aa		9.02	□□□□□ -0.97
PUM1-208	ENST00000471894	SP5	Q6BEB4	398 aa	Predicted RBP	9.02	□□□□□ -0.97
PUM1-208	ENST00000471894	LRRTM1	Q86UE6	522 aa		9.02	□□□□□ -0.97
PUM1-208	ENST00000471894	OR8G5	Q8NG78	346 aa		9.02	□□□□□ -0.97
PUM1-208	ENST00000471894	OR51A2	Q8NGJ7	313 aa		9.02	□□□□□ -0.97
PUM1-208	ENST00000471894	OR13C9	Q8NGT0	318 aa		9.02	□□□□□ -0.97
PUM1-208	ENST00000471894	MRPL24	Q96A35	216 aa	Known RBP	9.02	□□□□□ -0.97
PUM1-208	ENST00000471894	HIST1H2AA	Q96QV6	131 aa		9.02	□□□□□ -0.97
PUM1-208	ENST00000471894	MRPL37	Q9BZE1	423 aa	Known RBP	9.02	□□□□□ -0.97
PUM1-208	ENST00000471894	CHST5	Q9GZS9	411 aa		9.02	□□□□□ -0.97
PUM1-208	ENST00000471894	NEK6	Q9HC98	313 aa		9.02	□□□□□ -0.97
PUM1-208	ENST00000471894	TMEM138	Q9NPI0	162 aa		9.02	□□□□□ -0.97
PUM1-208	ENST00000471894	TMEM100	Q9NV29	134 aa		9.02	□□□□□ -0.97
PUM1-208	ENST00000471894	CISD1	Q9NZ45	108 aa	Known RBP	9.02	□□□□□ -0.97
PUM1-208	ENST00000471894	MRPL15	Q9P015	296 aa	Known RBP	9.02	□□□□□ -0.97
PUM1-208	ENST00000471894	TAAR3P	Q9P1P4	343 aa		9.02	□□□□□ -0.97
PUM1-208	ENST00000471894	SLC7A11	Q9UPY5	501 aa		9.02	□□□□□ -0.97
PUM1-208	ENST00000471894	AK6	Q9Y3D8	172 aa	Known RBP	9.02	□□□□□ -0.97
PUM1-208	ENST00000471894	PLCE1	Q9P212	2302 aa		9.02	□□□□□ -0.97
PUM1-208	ENST00000471894		A0A1W2PPW3	197 aa		9.01	□□□□□ -0.97
PUM1-208	ENST00000471894	SMIM30	A4D0T7	59 aa		9.01	□□□□□ -0.97
PUM1-208	ENST00000471894	ANXA2P2	A6NMY6	339 aa		9.01	□□□□□ -0.97
PUM1-208	ENST00000471894		A6NNC1	897 aa		9.01	□□□□□ -0.97
PUM1-208	ENST00000471894	SULT1B1	O43704	296 aa		9.01	□□□□□ -0.97
PUM1-208	ENST00000471894	ALX3	O95076	343 aa		9.01	□□□□□ -0.97
PUM1-208	ENST00000471894	CLDN1	O95832	211 aa		9.01	□□□□□ -0.97
PUM1-208	ENST00000471894	ERCC1	P07992	297 aa	Predicted RBP	9.01	□□□□□ -0.97
PUM1-208	ENST00000471894	HCK	P08631	526 aa		9.01	□□□□□ -0.97
PUM1-208	ENST00000471894	ROS1	P08922	2347 aa		9.01	□□□□□ -0.97
PUM1-208	ENST00000471894	PRKACB	P22694	351 aa		9.01	□□□□□ -0.97
PUM1-208	ENST00000471894	CA6	P23280	308 aa		9.01	□□□□□ -0.97
PUM1-208	ENST00000471894	BDKRB2	P30411	391 aa		9.01	□□□□□ -0.97
PUM1-208	ENST00000471894	APOBEC3A	P31941	199 aa	Predicted RBP	9.01	□□□□□ -0.97

Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms