RNA–Protein interactions for RNA: ENST00000471702.2

NPHP3-ACAD11-201, Transcript of NPHP3-ACAD11 readthrough (NMD candidate), humanhuman

TSL 2 BASIC

Gene NPHP3-ACAD11, Length 7,784 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-ACAD11-201ENST00000471702 CD82P27701 267 aa12□□□□□ -0.49
NPHP3-ACAD11-201ENST00000471702 FCGR2CP31995 323 aa12□□□□□ -0.49
NPHP3-ACAD11-201ENST00000471702 LSM11P83369 360 aaKnown RBP eCLIP12□□□□□ -0.495e-9■■□□□ 14.5
NPHP3-ACAD11-201ENST00000471702 FABP9Q0Z7S8 132 aa12□□□□□ -0.49
NPHP3-ACAD11-201ENST00000471702 Q6ZN92 141 aa12□□□□□ -0.49
NPHP3-ACAD11-201ENST00000471702 BCORP1Q8N888 145 aa12□□□□□ -0.49
NPHP3-ACAD11-201ENST00000471702 WFDC5Q8TCV5 224 aa12□□□□□ -0.49
NPHP3-ACAD11-201ENST00000471702 MRGPRX1Q96LB2 322 aa12□□□□□ -0.49
NPHP3-ACAD11-201ENST00000471702 DLL4Q9NR61 685 aa12□□□□□ -0.49
NPHP3-ACAD11-201ENST00000471702 BOLA1Q9Y3E2 137 aa12□□□□□ -0.49
NPHP3-ACAD11-201ENST00000471702 SETD1AO15047 1707 aaKnown RBP12□□□□□ -0.49
NPHP3-ACAD11-201ENST00000471702 ZNF727A8MUV8 499 aa12□□□□□ -0.49
NPHP3-ACAD11-201ENST00000471702 SDHBP21912 280 aa12□□□□□ -0.49
NPHP3-ACAD11-201ENST00000471702 OR2B8PP59922 312 aa12□□□□□ -0.49
NPHP3-ACAD11-201ENST00000471702 TEX261Q6UWH6 196 aa12□□□□□ -0.49
NPHP3-ACAD11-201ENST00000471702 NKAIN4Q8IVV8 208 aa12□□□□□ -0.49
NPHP3-ACAD11-201ENST00000471702 MARCH5Q9NX47 278 aa12□□□□□ -0.49
NPHP3-ACAD11-201ENST00000471702 AKAP12Q02952 1782 aa12□□□□□ -0.49
NPHP3-ACAD11-201ENST00000471702 ZNF701M0R085 212 aaPredicted RBP12□□□□□ -0.49
NPHP3-ACAD11-201ENST00000471702 PAPLNO95428 1278 aa12□□□□□ -0.49
NPHP3-ACAD11-201ENST00000471702 SPINK2P20155 84 aa12□□□□□ -0.49
NPHP3-ACAD11-201ENST00000471702 AMMECR1LQ6DCA0 310 aa12□□□□□ -0.49
NPHP3-ACAD11-201ENST00000471702 ABHD17CQ6PCB6 329 aa12□□□□□ -0.49
NPHP3-ACAD11-201ENST00000471702 OR2I1PQ8NGU4 316 aa12□□□□□ -0.49
NPHP3-ACAD11-201ENST00000471702 LOC107986453A0A1B0GWG9 222 aa12□□□□□ -0.49
NPHP3-ACAD11-201ENST00000471702 NDUFB3O43676 98 aa12□□□□□ -0.49
NPHP3-ACAD11-201ENST00000471702 SLC2A10O95528 541 aa12□□□□□ -0.49
NPHP3-ACAD11-201ENST00000471702 APELAP0DMC3 54 aa12□□□□□ -0.49
NPHP3-ACAD11-201ENST00000471702 MMP15P51511 669 aa12□□□□□ -0.49
NPHP3-ACAD11-201ENST00000471702 FAAP20Q6NZ36 180 aa12□□□□□ -0.49
NPHP3-ACAD11-201ENST00000471702 OR5M8Q8NGP6 311 aa12□□□□□ -0.49
NPHP3-ACAD11-201ENST00000471702 AQP10Q96PS8 301 aa12□□□□□ -0.49
NPHP3-ACAD11-201ENST00000471702 UBQLN3Q9H347 655 aa12□□□□□ -0.49
NPHP3-ACAD11-201ENST00000471702 TXNIPQ9H3M7 391 aa12□□□□□ -0.49
NPHP3-ACAD11-201ENST00000471702 HS3ST3A1Q9Y663 406 aa12□□□□□ -0.49
NPHP3-ACAD11-201ENST00000471702 CEPT1Q9Y6K0 416 aa12□□□□□ -0.49
NPHP3-ACAD11-201ENST00000471702 PHIPQ8WWQ0 1821 aa12□□□□□ -0.49
NPHP3-ACAD11-201ENST00000471702 REEP5Q00765 189 aa12□□□□□ -0.49
NPHP3-ACAD11-201ENST00000471702 SPINK9Q5DT21 86 aa12□□□□□ -0.49
NPHP3-ACAD11-201ENST00000471702 LIPNQ5VXI9 398 aa12□□□□□ -0.49
NPHP3-ACAD11-201ENST00000471702 METRNLQ641Q3 311 aa12□□□□□ -0.49
NPHP3-ACAD11-201ENST00000471702 SEZ6L2Q6UXD5 910 aa12□□□□□ -0.49
NPHP3-ACAD11-201ENST00000471702 PTRH1Q86Y79 214 aaKnown RBP12□□□□□ -0.49
NPHP3-ACAD11-201ENST00000471702 PDLIM7Q9NR12 457 aa12□□□□□ -0.49
NPHP3-ACAD11-201ENST00000471702 KRASP01116 189 aa12□□□□□ -0.49
NPHP3-ACAD11-201ENST00000471702 HFEQ30201 348 aa12□□□□□ -0.49
NPHP3-ACAD11-201ENST00000471702 NAA50Q9GZZ1 169 aaKnown RBP12□□□□□ -0.49
NPHP3-ACAD11-201ENST00000471702 ADGRL4Q9HBW9 690 aa12□□□□□ -0.49
NPHP3-ACAD11-201ENST00000471702 PIK3C2AO00443 1686 aa11.99□□□□□ -0.49
NPHP3-ACAD11-201ENST00000471702 UBE2L5PA0A1B0GUS4 154 aa11.99□□□□□ -0.49
NPHP3-ACAD11-201ENST00000471702 ZNF354AO60765 605 aaPredicted RBP11.99□□□□□ -0.49
NPHP3-ACAD11-201ENST00000471702 INPP5JQ15735 1006 aaPredicted RBP11.99□□□□□ -0.49
NPHP3-ACAD11-201ENST00000471702 FAM162BQ5T6X4 162 aa11.99□□□□□ -0.49
NPHP3-ACAD11-201ENST00000471702 NEURL3Q96EH8 262 aa11.99□□□□□ -0.49
NPHP3-ACAD11-201ENST00000471702 TOX2Q96NM4 488 aa11.99□□□□□ -0.49
NPHP3-ACAD11-201ENST00000471702 HSD17B10Q99714 261 aaKnown RBP11.99□□□□□ -0.49
NPHP3-ACAD11-201ENST00000471702 CDK2AP2O75956 126 aa11.99□□□□□ -0.49
NPHP3-ACAD11-201ENST00000471702 HMGN3Q15651 99 aa11.99□□□□□ -0.49
NPHP3-ACAD11-201ENST00000471702 ZNF239Q16600 458 aaKnown RBP11.99□□□□□ -0.49
NPHP3-ACAD11-201ENST00000471702 TMUB2Q71RG4 321 aa11.99□□□□□ -0.49
NPHP3-ACAD11-201ENST00000471702 WFDC3Q8IUB2 231 aa11.99□□□□□ -0.49
NPHP3-ACAD11-201ENST00000471702 NUDT8Q8WV74 236 aa11.99□□□□□ -0.49
NPHP3-ACAD11-201ENST00000471702 TTC9Q92623 222 aa11.99□□□□□ -0.49
NPHP3-ACAD11-201ENST00000471702 CXorf58Q96LI9 332 aa11.99□□□□□ -0.49
NPHP3-ACAD11-201ENST00000471702 KIR3DX1Q9H7L2 352 aa11.99□□□□□ -0.49
NPHP3-ACAD11-201ENST00000471702 ST3GAL6Q9Y274 331 aa11.99□□□□□ -0.49
NPHP3-ACAD11-201ENST00000471702 SPRY1O43609 319 aaPredicted RBP11.99□□□□□ -0.49
NPHP3-ACAD11-201ENST00000471702 MT-ATP6P00846 226 aa11.99□□□□□ -0.49
NPHP3-ACAD11-201ENST00000471702 OR5AL1P0C617 328 aa11.99□□□□□ -0.49
NPHP3-ACAD11-201ENST00000471702 SNRPGP62308 76 aaKnown RBP11.99□□□□□ -0.49
NPHP3-ACAD11-201ENST00000471702 ACOT6Q3I5F7 207 aaPredicted RBP11.99□□□□□ -0.49
NPHP3-ACAD11-201ENST00000471702 LHFPL2Q6ZUX7 228 aa11.99□□□□□ -0.49
NPHP3-ACAD11-201ENST00000471702 OR5H6Q8NGV6 325 aa11.99□□□□□ -0.49
NPHP3-ACAD11-201ENST00000471702 B3GALT5Q9Y2C3 310 aa11.99□□□□□ -0.49
NPHP3-ACAD11-201ENST00000471702 CHST2Q9Y4C5 530 aa11.99□□□□□ -0.49
NPHP3-ACAD11-201ENST00000471702 TRGV5A0A0B4J1U4 118 aa11.99□□□□□ -0.49
NPHP3-ACAD11-201ENST00000471702 HOXA3O43365 443 aaPredicted RBP11.99□□□□□ -0.49
NPHP3-ACAD11-201ENST00000471702 ZNF205O95201 554 aa11.99□□□□□ -0.49
NPHP3-ACAD11-201ENST00000471702 MFAP4P55083 255 aa11.99□□□□□ -0.49
NPHP3-ACAD11-201ENST00000471702 RPEQ96AT9 228 aa11.99□□□□□ -0.49
NPHP3-ACAD11-201ENST00000471702 ZBP1Q9H171 429 aa11.99□□□□□ -0.49
NPHP3-ACAD11-201ENST00000471702 ZNF586Q9NXT0 402 aa11.99□□□□□ -0.49
NPHP3-ACAD11-201ENST00000471702 U3KQ87 197 aa11.99□□□□□ -0.49
NPHP3-ACAD11-201ENST00000471702 IGHV3OR16-12A0A075B7B8 117 aa11.99□□□□□ -0.49
NPHP3-ACAD11-201ENST00000471702 MBLAC1A4D2B0 266 aaPredicted RBP11.99□□□□□ -0.49
NPHP3-ACAD11-201ENST00000471702 TBX19O60806 448 aa11.99□□□□□ -0.49
NPHP3-ACAD11-201ENST00000471702 TCRBP04435 133 aa11.99□□□□□ -0.49
NPHP3-ACAD11-201ENST00000471702 CSNK1DP48730 415 aa11.99□□□□□ -0.49
NPHP3-ACAD11-201ENST00000471702 SLC38A9Q8NBW4 561 aa11.99□□□□□ -0.49
NPHP3-ACAD11-201ENST00000471702 SLC25A43Q8WUT9 341 aaPredicted RBP11.99□□□□□ -0.49
NPHP3-ACAD11-201ENST00000471702 PSENENQ9NZ42 101 aa11.99□□□□□ -0.49
NPHP3-ACAD11-201ENST00000471702 STRAPQ9Y3F4 350 aaKnown RBP11.99□□□□□ -0.49
NPHP3-ACAD11-201ENST00000471702 ST8SIA3O43173 380 aa11.99□□□□□ -0.49
NPHP3-ACAD11-201ENST00000471702 MMP7P09237 267 aaPredicted RBP11.99□□□□□ -0.49
NPHP3-ACAD11-201ENST00000471702 NPPBP16860 134 aa11.99□□□□□ -0.49
NPHP3-ACAD11-201ENST00000471702 KIAA0141Q14154 515 aaPredicted RBP11.99□□□□□ -0.49
NPHP3-ACAD11-201ENST00000471702 RTL10Q7L3V2 364 aa11.99□□□□□ -0.49
NPHP3-ACAD11-201ENST00000471702 EIF4E3Q8N5X7 224 aaKnown RBP11.99□□□□□ -0.49
NPHP3-ACAD11-201ENST00000471702 ELSPBP1Q96BH3 223 aa11.99□□□□□ -0.49
NPHP3-ACAD11-201ENST00000471702 TUBA4BQ9H853 241 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms