RNA–Protein interactions for RNA: ENST00000471037.1

SF3A1-206, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 3

Gene SF3A1, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-206ENST00000471037 LOC105371242A0A075B767 164 aa7.69□□□□□ -1.18
SF3A1-206ENST00000471037 OR6C6A6NF89 314 aa7.69□□□□□ -1.18
SF3A1-206ENST00000471037 PSMD9O00233 223 aa7.69□□□□□ -1.18
SF3A1-206ENST00000471037 KCNAB3O43448 404 aa7.69□□□□□ -1.18
SF3A1-206ENST00000471037 APOC1P02654 83 aa7.69□□□□□ -1.18
SF3A1-206ENST00000471037 ZNF250P15622 560 aa7.69□□□□□ -1.18
SF3A1-206ENST00000471037 PSMB9P28065 219 aa7.69□□□□□ -1.18
SF3A1-206ENST00000471037 HSD11B1P28845 292 aa7.69□□□□□ -1.18
SF3A1-206ENST00000471037 CRYBB2P43320 205 aa7.69□□□□□ -1.18
SF3A1-206ENST00000471037 ALDH3B2P48448 385 aa7.69□□□□□ -1.18
SF3A1-206ENST00000471037 TGM4P49221 684 aa7.69□□□□□ -1.18
SF3A1-206ENST00000471037 KLF3P57682 345 aaPredicted RBP7.69□□□□□ -1.18
SF3A1-206ENST00000471037 PSG4Q00888 419 aa7.69□□□□□ -1.18
SF3A1-206ENST00000471037 PLP2Q04941 152 aa7.69□□□□□ -1.18
SF3A1-206ENST00000471037 MLLT11Q13015 90 aaPredicted RBP7.69□□□□□ -1.18
SF3A1-206ENST00000471037 TAF13Q15543 124 aa7.69□□□□□ -1.18
SF3A1-206ENST00000471037 TIGD6Q17RP2 521 aa7.69□□□□□ -1.18
SF3A1-206ENST00000471037 NKPD1Q17RQ9 610 aa7.69□□□□□ -1.18
SF3A1-206ENST00000471037 ZNF829Q3KNS6 432 aaPredicted RBP7.69□□□□□ -1.18
SF3A1-206ENST00000471037 CCDC58Q4VC31 144 aa7.69□□□□□ -1.18
SF3A1-206ENST00000471037 AWAT1Q58HT5 328 aa7.69□□□□□ -1.18
SF3A1-206ENST00000471037 PABPC1L2AQ5JQF8 200 aa7.69□□□□□ -1.18
SF3A1-206ENST00000471037 PRR31Q5SQ13 230 aa7.69□□□□□ -1.18
SF3A1-206ENST00000471037 FDX2Q6P4F2 183 aa7.69□□□□□ -1.18
SF3A1-206ENST00000471037 KLBQ86Z14 1044 aa7.69□□□□□ -1.18
SF3A1-206ENST00000471037 SLC30A7Q8NEW0 376 aa7.69□□□□□ -1.18
SF3A1-206ENST00000471037 OR1F12Q8NHA8 337 aa7.69□□□□□ -1.18
SF3A1-206ENST00000471037 FGFBP3Q8TAT2 258 aa7.69□□□□□ -1.18
SF3A1-206ENST00000471037 GATAD2BQ8WXI9 593 aa7.69□□□□□ -1.18
SF3A1-206ENST00000471037 SPTSSAQ969W0 71 aa7.69□□□□□ -1.18
SF3A1-206ENST00000471037 WNT5BQ9H1J7 359 aa7.69□□□□□ -1.18
SF3A1-206ENST00000471037 ISG20L2Q9H9L3 353 aaKnown RBP7.69□□□□□ -1.18
SF3A1-206ENST00000471037 ACOXLQ9NUZ1 547 aa7.69□□□□□ -1.18
SF3A1-206ENST00000471037 TAAR3PQ9P1P4 343 aa7.69□□□□□ -1.18
SF3A1-206ENST00000471037 GPR160Q9UJ42 338 aa7.69□□□□□ -1.18
SF3A1-206ENST00000471037 LRP12Q9Y561 859 aa7.69□□□□□ -1.18
SF3A1-206ENST00000471037 IQCMA0A1B0GVH7 501 aa7.68□□□□□ -1.18
SF3A1-206ENST00000471037 ACOD1A6NK06 481 aa7.68□□□□□ -1.18
SF3A1-206ENST00000471037 MAGEB4O15481 346 aaPredicted RBP7.68□□□□□ -1.18
SF3A1-206ENST00000471037 PLPP2O43688 288 aa7.68□□□□□ -1.18
SF3A1-206ENST00000471037 CDC14BO60729 498 aa7.68□□□□□ -1.18
SF3A1-206ENST00000471037 INMTO95050 263 aa7.68□□□□□ -1.18
SF3A1-206ENST00000471037 FSHBP01225 129 aa7.68□□□□□ -1.18
SF3A1-206ENST00000471037 IGHV2-5P01817 119 aa7.68□□□□□ -1.18
SF3A1-206ENST00000471037 PATE4P0C8F1 98 aa7.68□□□□□ -1.18
SF3A1-206ENST00000471037 HSMCR30P0CW71 290 aa7.68□□□□□ -1.18
SF3A1-206ENST00000471037 CPEP16870 476 aa7.68□□□□□ -1.18
SF3A1-206ENST00000471037 GATA3P23771 443 aa7.68□□□□□ -1.18
SF3A1-206ENST00000471037 OTX1P32242 354 aaPredicted RBP7.68□□□□□ -1.18
SF3A1-206ENST00000471037 HTR5AP47898 357 aa7.68□□□□□ -1.18
SF3A1-206ENST00000471037 MMP16P51512 607 aa7.68□□□□□ -1.18
SF3A1-206ENST00000471037 GP2P55259 537 aaKnown RBP7.68□□□□□ -1.18
SF3A1-206ENST00000471037 SELENOVP59797 346 aa7.68□□□□□ -1.18
SF3A1-206ENST00000471037 PSMA6P60900 246 aaKnown RBP7.68□□□□□ -1.18
SF3A1-206ENST00000471037 CCL8P80075 99 aa7.68□□□□□ -1.18
SF3A1-206ENST00000471037 GPR50Q13585 617 aa7.68□□□□□ -1.18
SF3A1-206ENST00000471037 TPBGQ13641 420 aa7.68□□□□□ -1.18
SF3A1-206ENST00000471037 TUSC1Q2TAM9 212 aa7.68□□□□□ -1.18
SF3A1-206ENST00000471037 KRTAP27-1Q3LI81 207 aa7.68□□□□□ -1.18
SF3A1-206ENST00000471037 ARMCX4Q5H9R4 360 aa7.68□□□□□ -1.18
SF3A1-206ENST00000471037 AVPI1Q5T686 147 aa7.68□□□□□ -1.18
SF3A1-206ENST00000471037 ZNF774Q6NX45 483 aa7.68□□□□□ -1.18
SF3A1-206ENST00000471037 RPL22L1Q6P5R6 122 aaKnown RBP7.68□□□□□ -1.18
SF3A1-206ENST00000471037 SPATC1Q76KD6 591 aa7.68□□□□□ -1.18
SF3A1-206ENST00000471037 GPR141Q7Z602 305 aa7.68□□□□□ -1.18
SF3A1-206ENST00000471037 PAQR4Q8N4S7 273 aaPredicted RBP7.68□□□□□ -1.18
SF3A1-206ENST00000471037 ZDHHC22Q8N966 263 aa7.68□□□□□ -1.18
SF3A1-206ENST00000471037 AKR7LQ8NHP1 331 aa7.68□□□□□ -1.18
SF3A1-206ENST00000471037 NANPQ8TBE9 248 aa7.68□□□□□ -1.18
SF3A1-206ENST00000471037 SYNPRQ8TBG9 265 aa7.68□□□□□ -1.18
SF3A1-206ENST00000471037 RPS4Y2Q8TD47 263 aa7.68□□□□□ -1.18
SF3A1-206ENST00000471037 UFD1Q92890 307 aa7.68□□□□□ -1.18
SF3A1-206ENST00000471037 OPALINQ96PE5 141 aa7.68□□□□□ -1.18
SF3A1-206ENST00000471037 DCLRE1CQ96SD1 692 aaKnown RBP7.68□□□□□ -1.18
SF3A1-206ENST00000471037 KCNJ15Q99712 375 aa7.68□□□□□ -1.18
SF3A1-206ENST00000471037 SLC6A7Q99884 636 aa7.68□□□□□ -1.18
SF3A1-206ENST00000471037 BCL2L14Q9BZR8 327 aa7.68□□□□□ -1.18
SF3A1-206ENST00000471037 MOB1AQ9H8S9 216 aa7.68□□□□□ -1.18
SF3A1-206ENST00000471037 ESM1Q9NQ30 184 aa7.68□□□□□ -1.18
SF3A1-206ENST00000471037 WIPI2Q9Y4P8 454 aa7.68□□□□□ -1.18
SF3A1-206ENST00000471037 R4GMQ9 66 aa7.68□□□□□ -1.18
SF3A1-206ENST00000471037 IGHV1-69-2A0A0G2JMI3 117 aa7.67□□□□□ -1.18
SF3A1-206ENST00000471037 CLDN25C9JDP6 229 aa7.67□□□□□ -1.18
SF3A1-206ENST00000471037 LOC110117498-PIK3R3F6TDL0 507 aa7.67□□□□□ -1.18
SF3A1-206ENST00000471037 M0R135 149 aa7.67□□□□□ -1.18
SF3A1-206ENST00000471037 CCRL2O00421 344 aa7.67□□□□□ -1.18
SF3A1-206ENST00000471037 OGG1O15527 345 aa7.67□□□□□ -1.18
SF3A1-206ENST00000471037 SRSF10O75494 262 aaKnown RBP7.67□□□□□ -1.18
SF3A1-206ENST00000471037 RPP14O95059 124 aaKnown RBP7.67□□□□□ -1.18
SF3A1-206ENST00000471037 LALBAP00709 142 aa7.67□□□□□ -1.18
SF3A1-206ENST00000471037 CD1AP06126 327 aa7.67□□□□□ -1.18
SF3A1-206ENST00000471037 FAM157BP0CG42 384 aa7.67□□□□□ -1.18
SF3A1-206ENST00000471037 ADRA2CP18825 462 aa7.67□□□□□ -1.18
SF3A1-206ENST00000471037 APLNRP35414 380 aa7.67□□□□□ -1.18
SF3A1-206ENST00000471037 RAD52P43351 418 aa7.67□□□□□ -1.18
SF3A1-206ENST00000471037 CX3CR1P49238 355 aa7.67□□□□□ -1.18
SF3A1-206ENST00000471037 CCR9P51686 369 aa7.67□□□□□ -1.18
SF3A1-206ENST00000471037 TPTEP56180 551 aa7.67□□□□□ -1.18
SF3A1-206ENST00000471037 ERVS71-1P61550 626 aa7.67□□□□□ -1.18
SF3A1-206ENST00000471037 UBA52P62987 128 aaKnown RBP7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms