RNA–Protein interactions for RNA: ENST00000470652.1

COL9A1-206, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 5

Gene COL9A1, Length 531 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-206ENST00000470652 RIMS3Q9UJD0 308 aa3.19□□□□□ -1.9
COL9A1-206ENST00000470652 ZNF346Q9UL40 294 aaKnown RBP3.19□□□□□ -1.9
COL9A1-206ENST00000470652 TMED7Q9Y3B3 224 aa3.19□□□□□ -1.9
COL9A1-206ENST00000470652 ZNF337Q9Y3M9 751 aa3.19□□□□□ -1.9
COL9A1-206ENST00000470652 ENPP4Q9Y6X5 453 aa3.19□□□□□ -1.9
COL9A1-206ENST00000470652 ADGRG4Q8IZF6 3080 aa3.18□□□□□ -1.9
COL9A1-206ENST00000470652 RP1L1Q8IWN7 2480 aaPredicted RBP3.18□□□□□ -1.9
COL9A1-206ENST00000470652 CACNA1CQ13936 2221 aa3.18□□□□□ -1.9
COL9A1-206ENST00000470652 A0A087WUU8 490 aa3.18□□□□□ -1.9
COL9A1-206ENST00000470652 IGLV3-32A0A0A0MS00 114 aa3.18□□□□□ -1.9
COL9A1-206ENST00000470652 TRAV17A0A0B4J275 112 aa3.18□□□□□ -1.9
COL9A1-206ENST00000470652 A0A0B4J2E0 115 aa3.18□□□□□ -1.9
COL9A1-206ENST00000470652 A0A1B0GX12 115 aa3.18□□□□□ -1.9
COL9A1-206ENST00000470652 A0A1W2PQD3 144 aa3.18□□□□□ -1.9
COL9A1-206ENST00000470652 PRSS46E5RG02 174 aa3.18□□□□□ -1.9
COL9A1-206ENST00000470652 E5RGE8 158 aa3.18□□□□□ -1.9
COL9A1-206ENST00000470652 H7C1C5 153 aa3.18□□□□□ -1.9
COL9A1-206ENST00000470652 TP53I11O14683 189 aa3.18□□□□□ -1.9
COL9A1-206ENST00000470652 CXCL13O43927 109 aa3.18□□□□□ -1.9
COL9A1-206ENST00000470652 GPRIN2O60269 458 aa3.18□□□□□ -1.9
COL9A1-206ENST00000470652 FCGR3BO75015 233 aa3.18□□□□□ -1.9
COL9A1-206ENST00000470652 SERPINB7O75635 380 aa3.18□□□□□ -1.9
COL9A1-206ENST00000470652 AQP8O94778 261 aa3.18□□□□□ -1.9
COL9A1-206ENST00000470652 AKR7A3O95154 331 aa3.18□□□□□ -1.9
COL9A1-206ENST00000470652 CLIC3O95833 236 aa3.18□□□□□ -1.9
COL9A1-206ENST00000470652 TGM6O95932 706 aa3.18□□□□□ -1.9
COL9A1-206ENST00000470652 AK1P00568 194 aa3.18□□□□□ -1.9
COL9A1-206ENST00000470652 IFNW1P05000 195 aa3.18□□□□□ -1.9
COL9A1-206ENST00000470652 FABP3P05413 133 aa3.18□□□□□ -1.9
COL9A1-206ENST00000470652 ADORA3P0DMS8 318 aa3.18□□□□□ -1.9
COL9A1-206ENST00000470652 ANPEPP15144 967 aa3.18□□□□□ -1.9
COL9A1-206ENST00000470652 SELEP16581 610 aa3.18□□□□□ -1.9
COL9A1-206ENST00000470652 ZNF24P17028 368 aa3.18□□□□□ -1.9
COL9A1-206ENST00000470652 MAGEA2P43356 314 aa3.18□□□□□ -1.9
COL9A1-206ENST00000470652 TMED10P49755 219 aaKnown RBP3.18□□□□□ -1.9
COL9A1-206ENST00000470652 LHX2P50458 406 aa3.18□□□□□ -1.9
COL9A1-206ENST00000470652 P2RX1P51575 399 aa3.18□□□□□ -1.9
COL9A1-206ENST00000470652 UCNP55089 124 aa3.18□□□□□ -1.9
COL9A1-206ENST00000470652 CLDN18P56856 261 aa3.18□□□□□ -1.9
COL9A1-206ENST00000470652 FXYD6P3P58550 94 aa3.18□□□□□ -1.9
COL9A1-206ENST00000470652 LCN6P62502 163 aa3.18□□□□□ -1.9
COL9A1-206ENST00000470652 SRPXP78539 464 aa3.18□□□□□ -1.9
COL9A1-206ENST00000470652 CHRNB3Q05901 458 aa3.18□□□□□ -1.9
COL9A1-206ENST00000470652 C17orf67Q0P5P2 114 aa3.18□□□□□ -1.9
COL9A1-206ENST00000470652 GK3PQ14409 553 aa3.18□□□□□ -1.9
COL9A1-206ENST00000470652 ESPL1Q14674 2120 aa3.18□□□□□ -1.9
COL9A1-206ENST00000470652 PPA1Q15181 289 aa3.18□□□□□ -1.9
COL9A1-206ENST00000470652 TMEM44Q2T9K0 475 aa3.18□□□□□ -1.9
COL9A1-206ENST00000470652 TMEM176BQ3YBM2 270 aaPredicted RBP3.18□□□□□ -1.9
COL9A1-206ENST00000470652 LBHQ53QV2 105 aaPredicted RBP3.18□□□□□ -1.9
COL9A1-206ENST00000470652 PRAMEF8Q5VWM4 474 aa3.18□□□□□ -1.9
COL9A1-206ENST00000470652 PRAMEF7Q5VXH5 474 aa3.18□□□□□ -1.9
COL9A1-206ENST00000470652 SHEQ5VZ18 495 aa3.18□□□□□ -1.9
COL9A1-206ENST00000470652 TMEM236Q5W0B7 351 aa3.18□□□□□ -1.9
COL9A1-206ENST00000470652 RTL6Q6ICC9 239 aa3.18□□□□□ -1.9
COL9A1-206ENST00000470652 ZNF770Q6IQ21 691 aaPredicted RBP3.18□□□□□ -1.9
COL9A1-206ENST00000470652 BTNL8Q6UX41 500 aa3.18□□□□□ -1.9
COL9A1-206ENST00000470652 IGFL3Q6UXB1 125 aa3.18□□□□□ -1.9
COL9A1-206ENST00000470652 CYP4Z1Q86W10 505 aa3.18□□□□□ -1.9
COL9A1-206ENST00000470652 CROCCP3Q8IVE0 287 aa3.18□□□□□ -1.9
COL9A1-206ENST00000470652 AQP12AQ8IXF9 295 aa3.18□□□□□ -1.9
COL9A1-206ENST00000470652 NRMQ8IXM6 262 aa3.18□□□□□ -1.9
COL9A1-206ENST00000470652 ZADH2Q8N4Q0 377 aa3.18□□□□□ -1.9
COL9A1-206ENST00000470652 ZFP62Q8NB50 900 aaPredicted RBP3.18□□□□□ -1.9
COL9A1-206ENST00000470652 OR8D4Q8NGM9 314 aa3.18□□□□□ -1.9
COL9A1-206ENST00000470652 OCC1Q8TAD7 63 aa3.18□□□□□ -1.9
COL9A1-206ENST00000470652 SLC7A13Q8TCU3 470 aa3.18□□□□□ -1.9
COL9A1-206ENST00000470652 GEMIN6Q8WXD5 167 aaKnown RBP3.18□□□□□ -1.9
COL9A1-206ENST00000470652 C11orf52Q96A22 123 aa3.18□□□□□ -1.9
COL9A1-206ENST00000470652 PNPLA2Q96AD5 504 aa3.18□□□□□ -1.9
COL9A1-206ENST00000470652 SLC25A36Q96CQ1 311 aa3.18□□□□□ -1.9
COL9A1-206ENST00000470652 PRRC1Q96M27 445 aa3.18□□□□□ -1.9
COL9A1-206ENST00000470652 OR5B2Q96R09 309 aa3.18□□□□□ -1.9
COL9A1-206ENST00000470652 ZNF607Q96SK3 696 aa3.18□□□□□ -1.9
COL9A1-206ENST00000470652 CIB1Q99828 191 aa3.18□□□□□ -1.9
COL9A1-206ENST00000470652 OCR1Q9BZK8 76 aa3.18□□□□□ -1.9
COL9A1-206ENST00000470652 PLA2G12AQ9BZM1 189 aa3.18□□□□□ -1.9
COL9A1-206ENST00000470652 ADNPQ9H2P0 1102 aa3.18□□□□□ -1.9
COL9A1-206ENST00000470652 EXO5Q9H790 373 aa3.18□□□□□ -1.9
COL9A1-206ENST00000470652 NMNAT1Q9HAN9 279 aaPredicted RBP3.18□□□□□ -1.9
COL9A1-206ENST00000470652 IL1RAPQ9NPH3 570 aa3.18□□□□□ -1.9
COL9A1-206ENST00000470652 POLE3Q9NRF9 147 aa3.18□□□□□ -1.9
COL9A1-206ENST00000470652 THUMPD1Q9NXG2 353 aaKnown RBP3.18□□□□□ -1.9
COL9A1-206ENST00000470652 TEKT2Q9UIF3 430 aa3.18□□□□□ -1.9
COL9A1-206ENST00000470652 NSG2Q9Y328 171 aa3.18□□□□□ -1.9
COL9A1-206ENST00000470652 SAMHD1Q9Y3Z3 626 aaKnown RBP3.18□□□□□ -1.9
COL9A1-206ENST00000470652 AP4S1Q9Y587 144 aa3.18□□□□□ -1.9
COL9A1-206ENST00000470652 TENM4Q6N022 2769 aa3.17□□□□□ -1.9
COL9A1-206ENST00000470652 RTTNQ86VV8 2226 aa3.17□□□□□ -1.9
COL9A1-206ENST00000470652 ZNF462Q96JM2 2506 aa3.17□□□□□ -1.9
COL9A1-206ENST00000470652 NCOA6Q14686 2063 aaPredicted RBP3.17□□□□□ -1.9
COL9A1-206ENST00000470652 A0A087WUJ7 227 aa3.17□□□□□ -1.9
COL9A1-206ENST00000470652 TRGV5A0A0B4J1U4 118 aa3.17□□□□□ -1.9
COL9A1-206ENST00000470652 SH3PXD2BA1X283 911 aa3.17□□□□□ -1.9
COL9A1-206ENST00000470652 TRAPPC13A5PLN9 417 aa3.17□□□□□ -1.9
COL9A1-206ENST00000470652 FTCDNL1E5RQL4 147 aa3.17□□□□□ -1.9
COL9A1-206ENST00000470652 C11orf98E9PRG8 122 aa3.17□□□□□ -1.9
COL9A1-206ENST00000470652 H3BNH8 94 aa3.17□□□□□ -1.9
COL9A1-206ENST00000470652 TNFRSF11BO00300 401 aa3.17□□□□□ -1.9
COL9A1-206ENST00000470652 DLGAP1O14490 977 aa3.17□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms