RNA–Protein interactions for RNA: ENST00000470621.1

SSB-209, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 3

Gene SSB, Length 440 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-209ENST00000470621 ERCC1P07992 297 aaPredicted RBP2.24□□□□□ -2.05
SSB-209ENST00000470621 TMEM236Q5W0B7 351 aa2.24□□□□□ -2.05
SSB-209ENST00000470621 Q6ZSR6 202 aa2.24□□□□□ -2.05
SSB-209ENST00000470621 CENPQQ7L2Z9 268 aaPredicted RBP2.24□□□□□ -2.05
SSB-209ENST00000470621 VKORC1L1Q8N0U8 176 aa2.24□□□□□ -2.05
SSB-209ENST00000470621 GABRG1Q8N1C3 465 aa2.24□□□□□ -2.05
SSB-209ENST00000470621 LINC00469Q8N7U9 141 aa2.24□□□□□ -2.05
SSB-209ENST00000470621 OR51F2Q8NH61 342 aa2.24□□□□□ -2.05
SSB-209ENST00000470621 RAB1CQ92928 201 aa2.24□□□□□ -2.05
SSB-209ENST00000470621 ZBED3Q96IU2 234 aaPredicted RBP2.24□□□□□ -2.05
SSB-209ENST00000470621 PIGUQ9H490 435 aa2.24□□□□□ -2.05
SSB-209ENST00000470621 IL37Q9NZH6 218 aa2.24□□□□□ -2.05
SSB-209ENST00000470621 MMACHCQ9Y4U1 282 aa2.24□□□□□ -2.05
SSB-209ENST00000470621 PLXNB1O43157 2135 aa2.24□□□□□ -2.05
SSB-209ENST00000470621 INSRP06213 1382 aa2.23□□□□□ -2.05
SSB-209ENST00000470621 MERTKQ12866 999 aa2.23□□□□□ -2.05
SSB-209ENST00000470621 BTN1A1Q13410 526 aa2.23□□□□□ -2.05
SSB-209ENST00000470621 NAB1Q13506 487 aa2.23□□□□□ -2.05
SSB-209ENST00000470621 TWF2Q6IBS0 349 aaKnown RBP2.23□□□□□ -2.05
SSB-209ENST00000470621 WDR59Q6PJI9 974 aa2.23□□□□□ -2.05
SSB-209ENST00000470621 TMPRSS11AQ6ZMR5 421 aa2.23□□□□□ -2.05
SSB-209ENST00000470621 JAGN1Q8N5M9 183 aa2.23□□□□□ -2.05
SSB-209ENST00000470621 SLC25A29Q8N8R3 303 aa2.23□□□□□ -2.05
SSB-209ENST00000470621 CCNB1IP1Q9NPC3 277 aa2.23□□□□□ -2.05
SSB-209ENST00000470621 CAB39Q9Y376 341 aaPredicted RBP2.23□□□□□ -2.05
SSB-209ENST00000470621 MROH7Q68CQ1 1323 aa2.22□□□□□ -2.05
SSB-209ENST00000470621 CENPBD1B2RD01 187 aa2.22□□□□□ -2.05
SSB-209ENST00000470621 C4orf51C9J302 202 aa2.22□□□□□ -2.05
SSB-209ENST00000470621 FSTL3O95633 263 aa2.22□□□□□ -2.05
SSB-209ENST00000470621 HMOX2P30519 316 aa2.22□□□□□ -2.05
SSB-209ENST00000470621 SLC1A2P43004 574 aa2.22□□□□□ -2.05
SSB-209ENST00000470621 SPANXN2Q5MJ10 180 aa2.22□□□□□ -2.05
SSB-209ENST00000470621 OR52N1Q8NH53 320 aa2.22□□□□□ -2.05
SSB-209ENST00000470621 N4BP2L2Q92802 583 aaPredicted RBP2.22□□□□□ -2.05
SSB-209ENST00000470621 MCUR1Q96AQ8 359 aa2.22□□□□□ -2.05
SSB-209ENST00000470621 GSDMAQ96QA5 445 aa2.22□□□□□ -2.05
SSB-209ENST00000470621 TEAD3Q99594 435 aa2.22□□□□□ -2.05
SSB-209ENST00000470621 CA10Q9NS85 328 aa2.22□□□□□ -2.05
SSB-209ENST00000470621 ZNF257Q9Y2Q1 563 aa2.22□□□□□ -2.05
SSB-209ENST00000470621 KCNE1BA0A087WTH5 132 aa2.21□□□□□ -2.06
SSB-209ENST00000470621 IGKV1-6A0A0C4DH72 117 aa2.21□□□□□ -2.06
SSB-209ENST00000470621 DNALI1O14645 258 aaPredicted RBP2.21□□□□□ -2.06
SSB-209ENST00000470621 BCKDKO14874 412 aa2.21□□□□□ -2.06
SSB-209ENST00000470621 FCN3O75636 299 aa2.21□□□□□ -2.06
SSB-209ENST00000470621 TDP2O95551 362 aa2.21□□□□□ -2.06
SSB-209ENST00000470621 AGTP01019 485 aa2.21□□□□□ -2.06
SSB-209ENST00000470621 IGKV1-39P01597 117 aa2.21□□□□□ -2.06
SSB-209ENST00000470621 HLA-HP01893 362 aa2.21□□□□□ -2.06
SSB-209ENST00000470621 IGKV1D-39P04432 117 aa2.21□□□□□ -2.06
SSB-209ENST00000470621 IFNW1P05000 195 aa2.21□□□□□ -2.06
SSB-209ENST00000470621 APLNRP35414 380 aa2.21□□□□□ -2.06
SSB-209ENST00000470621 ZNF33AQ06730 810 aa2.21□□□□□ -2.06
SSB-209ENST00000470621 ITIH4Q14624 930 aa2.21□□□□□ -2.06
SSB-209ENST00000470621 GABRA6Q16445 453 aa2.21□□□□□ -2.06
SSB-209ENST00000470621 BBS7Q8IWZ6 715 aa2.21□□□□□ -2.06
SSB-209ENST00000470621 ORMDL3Q8N138 153 aa2.21□□□□□ -2.06
SSB-209ENST00000470621 PQLC3Q8N755 202 aa2.21□□□□□ -2.06
SSB-209ENST00000470621 CALN1Q9BXU9 219 aa2.21□□□□□ -2.06
SSB-209ENST00000470621 SCELO95171 688 aa2.2□□□□□ -2.06
SSB-209ENST00000470621 PCK1P35558 622 aa2.2□□□□□ -2.06
SSB-209ENST00000470621 TGM4P49221 684 aa2.2□□□□□ -2.06
SSB-209ENST00000470621 IDI1Q13907 227 aa2.2□□□□□ -2.06
SSB-209ENST00000470621 OR1Q1Q15612 314 aa2.2□□□□□ -2.06
SSB-209ENST00000470621 ZNF678Q5SXM1 525 aa2.2□□□□□ -2.06
SSB-209ENST00000470621 SMARCD3Q6STE5 483 aa2.2□□□□□ -2.06
SSB-209ENST00000470621 WDR82Q6UXN9 313 aa2.2□□□□□ -2.06
SSB-209ENST00000470621 EIF3MQ7L2H7 374 aaKnown RBP2.2□□□□□ -2.06
SSB-209ENST00000470621 LUZP2Q86TE4 346 aa2.2□□□□□ -2.06
SSB-209ENST00000470621 RAB43Q86YS6 212 aa2.2□□□□□ -2.06
SSB-209ENST00000470621 SLC26A10Q8NG04 563 aa2.2□□□□□ -2.06
SSB-209ENST00000470621 TMEM159Q96B96 161 aa2.2□□□□□ -2.06
SSB-209ENST00000470621 FAM19A4Q96LR4 140 aa2.2□□□□□ -2.06
SSB-209ENST00000470621 EMC6Q9BV81 110 aa2.2□□□□□ -2.06
SSB-209ENST00000470621 A8MWL6 223 aa2.19□□□□□ -2.06
SSB-209ENST00000470621 CTNSO60931 367 aa2.19□□□□□ -2.06
SSB-209ENST00000470621 SCO1O75880 301 aa2.19□□□□□ -2.06
SSB-209ENST00000470621 MMP7P09237 267 aaPredicted RBP2.19□□□□□ -2.06
SSB-209ENST00000470621 RAB5AP20339 215 aa2.19□□□□□ -2.06
SSB-209ENST00000470621 OR1G1P47890 313 aa2.19□□□□□ -2.06
SSB-209ENST00000470621 TMEM53Q6P2H8 277 aa2.19□□□□□ -2.06
SSB-209ENST00000470621 NT5DC3Q86UY8 548 aa2.19□□□□□ -2.06
SSB-209ENST00000470621 OR4M2Q8NGB6 313 aa2.19□□□□□ -2.06
SSB-209ENST00000470621 PKMYT1Q99640 499 aa2.19□□□□□ -2.06
SSB-209ENST00000470621 MS4A8Q9BY19 250 aa2.19□□□□□ -2.06
SSB-209ENST00000470621 TRIM45Q9H8W5 580 aaPredicted RBP2.19□□□□□ -2.06
SSB-209ENST00000470621 TAS2R1Q9NYW7 299 aa2.19□□□□□ -2.06
SSB-209ENST00000470621 YARS2Q9Y2Z4 477 aaKnown RBP2.19□□□□□ -2.06
SSB-209ENST00000470621 A0A075B6Q4 140 aa2.18□□□□□ -2.06
SSB-209ENST00000470621 LOC102724200A0A096LPH7 203 aaPredicted RBP2.18□□□□□ -2.06
SSB-209ENST00000470621 ISPDA4D126 451 aa2.18□□□□□ -2.06
SSB-209ENST00000470621 ZNF878C9JN71 531 aa2.18□□□□□ -2.06
SSB-209ENST00000470621 MAS1P04201 325 aa2.18□□□□□ -2.06
SSB-209ENST00000470621 KRT16P08779 473 aa2.18□□□□□ -2.06
SSB-209ENST00000470621 BEX3Q00994 111 aa2.18□□□□□ -2.06
SSB-209ENST00000470621 TNFRSF9Q07011 255 aa2.18□□□□□ -2.06
SSB-209ENST00000470621 RCN1Q15293 331 aa2.18□□□□□ -2.06
SSB-209ENST00000470621 MFSD14CQ5VZR4 134 aa2.18□□□□□ -2.06
SSB-209ENST00000470621 OR2T5Q6IEZ7 315 aa2.18□□□□□ -2.06
SSB-209ENST00000470621 METAP1DQ6UB28 335 aaPredicted RBP2.18□□□□□ -2.06
SSB-209ENST00000470621 FAM43BQ6ZT52 329 aaPredicted RBP2.18□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms