RNA–Protein interactions for RNA: ENST00000466862.1

GTF3C3-209, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 2

Gene GTF3C3, Length 447 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-209ENST00000466862 IGLV2-23P01705 113 aa1.28□□□□□ -2.2
GTF3C3-209ENST00000466862 RPN2P04844 631 aa1.28□□□□□ -2.2
GTF3C3-209ENST00000466862 GOLGA8HP0CJ92 632 aa1.28□□□□□ -2.2
GTF3C3-209ENST00000466862 PRPS2P11908 318 aa1.28□□□□□ -2.2
GTF3C3-209ENST00000466862 ARL2P36404 184 aa1.28□□□□□ -2.2
GTF3C3-209ENST00000466862 RBM34P42696 430 aaKnown RBP1.28□□□□□ -2.2
GTF3C3-209ENST00000466862 RANBP1P43487 201 aa1.28□□□□□ -2.2
GTF3C3-209ENST00000466862 KCNJ3P48549 501 aa1.28□□□□□ -2.2
GTF3C3-209ENST00000466862 UBE2E1P51965 193 aa1.28□□□□□ -2.2
GTF3C3-209ENST00000466862 NDUFA8P51970 172 aa1.28□□□□□ -2.2
GTF3C3-209ENST00000466862 CDKN2DP55273 166 aa1.28□□□□□ -2.2
GTF3C3-209ENST00000466862 SYNJ2BPP57105 145 aa1.28□□□□□ -2.2
GTF3C3-209ENST00000466862 TAS2R46P59540 309 aa1.28□□□□□ -2.2
GTF3C3-209ENST00000466862 RPL31P62899 125 aaKnown RBP1.28□□□□□ -2.2
GTF3C3-209ENST00000466862 CACNG7P62955 275 aa1.28□□□□□ -2.2
GTF3C3-209ENST00000466862 ARG2P78540 354 aa1.28□□□□□ -2.2
GTF3C3-209ENST00000466862 ST3GAL4Q11206 333 aa1.28□□□□□ -2.2
GTF3C3-209ENST00000466862 ERCC8Q13216 396 aa1.28□□□□□ -2.2
GTF3C3-209ENST00000466862 STX3Q13277 289 aa1.28□□□□□ -2.2
GTF3C3-209ENST00000466862 PON2Q15165 354 aa1.28□□□□□ -2.2
GTF3C3-209ENST00000466862 TNXAQ16473 311 aa1.28□□□□□ -2.2
GTF3C3-209ENST00000466862 PSG3Q16557 428 aa1.28□□□□□ -2.2
GTF3C3-209ENST00000466862 TAL2Q16559 108 aa1.28□□□□□ -2.2
GTF3C3-209ENST00000466862 UBE2SQ16763 222 aa1.28□□□□□ -2.2
GTF3C3-209ENST00000466862 PDPK2PQ6A1A2 396 aa1.28□□□□□ -2.2
GTF3C3-209ENST00000466862 THOC7Q6I9Y2 204 aaKnown RBP1.28□□□□□ -2.2
GTF3C3-209ENST00000466862 APOBEC3HQ6NTF7 200 aaKnown RBP1.28□□□□□ -2.2
GTF3C3-209ENST00000466862 ERICH5Q6P6B1 374 aa1.28□□□□□ -2.2
GTF3C3-209ENST00000466862 Q6ZR03 302 aa1.28□□□□□ -2.2
GTF3C3-209ENST00000466862 RAB43Q86YS6 212 aa1.28□□□□□ -2.2
GTF3C3-209ENST00000466862 NKAIN4Q8IVV8 208 aa1.28□□□□□ -2.2
GTF3C3-209ENST00000466862 LRRC8AQ8IWT6 810 aa1.28□□□□□ -2.2
GTF3C3-209ENST00000466862 LINC00469Q8N7U9 141 aa1.28□□□□□ -2.2
GTF3C3-209ENST00000466862 CYB561D1Q8N8Q1 229 aa1.28□□□□□ -2.2
GTF3C3-209ENST00000466862 C11orf72Q8NBR9 251 aa1.28□□□□□ -2.2
GTF3C3-209ENST00000466862 GPR26Q8NDV2 337 aa1.28□□□□□ -2.2
GTF3C3-209ENST00000466862 OR10G4Q8NGN3 311 aa1.28□□□□□ -2.2
GTF3C3-209ENST00000466862 OR51A7Q8NH64 312 aa1.28□□□□□ -2.2
GTF3C3-209ENST00000466862 UBALD1Q8TB05 177 aa1.28□□□□□ -2.2
GTF3C3-209ENST00000466862 LGALS14Q8TCE9 139 aa1.28□□□□□ -2.2
GTF3C3-209ENST00000466862 ABHD3Q8WU67 409 aa1.28□□□□□ -2.2
GTF3C3-209ENST00000466862 ING5Q8WYH8 240 aa1.28□□□□□ -2.2
GTF3C3-209ENST00000466862 CDKL2Q92772 493 aa1.28□□□□□ -2.2
GTF3C3-209ENST00000466862 TM4SF18Q96CE8 201 aa1.28□□□□□ -2.2
GTF3C3-209ENST00000466862 HAUS1Q96CS2 278 aa1.28□□□□□ -2.2
GTF3C3-209ENST00000466862 CCDC124Q96CT7 223 aaKnown RBP1.28□□□□□ -2.2
GTF3C3-209ENST00000466862 ZBED3Q96IU2 234 aaPredicted RBP1.28□□□□□ -2.2
GTF3C3-209ENST00000466862 CPB2Q96IY4 423 aa1.28□□□□□ -2.2
GTF3C3-209ENST00000466862 BMFQ96LC9 184 aa1.28□□□□□ -2.2
GTF3C3-209ENST00000466862 UBE2E2Q96LR5 201 aa1.28□□□□□ -2.2
GTF3C3-209ENST00000466862 ZNF681Q96N22 645 aa1.28□□□□□ -2.2
GTF3C3-209ENST00000466862 TEAD3Q99594 435 aa1.28□□□□□ -2.2
GTF3C3-209ENST00000466862 OSBPL11Q9BXB4 747 aa1.28□□□□□ -2.2
GTF3C3-209ENST00000466862 ULBP2Q9BZM5 246 aa1.28□□□□□ -2.2
GTF3C3-209ENST00000466862 SYT4Q9H2B2 425 aa1.28□□□□□ -2.2
GTF3C3-209ENST00000466862 CHMP4BQ9H444 224 aaKnown RBP1.28□□□□□ -2.2
GTF3C3-209ENST00000466862 GOLPH3Q9H4A6 298 aa1.28□□□□□ -2.2
GTF3C3-209ENST00000466862 SAV1Q9H4B6 383 aaPredicted RBP1.28□□□□□ -2.2
GTF3C3-209ENST00000466862 SPACA1Q9HBV2 294 aa1.28□□□□□ -2.2
GTF3C3-209ENST00000466862 MED4Q9NPJ6 270 aa1.28□□□□□ -2.2
GTF3C3-209ENST00000466862 RRAGDQ9NQL2 400 aaPredicted RBP1.28□□□□□ -2.2
GTF3C3-209ENST00000466862 NRBP2Q9NSY0 501 aa1.28□□□□□ -2.2
GTF3C3-209ENST00000466862 CD300AQ9UGN4 299 aa1.28□□□□□ -2.2
GTF3C3-209ENST00000466862 CLEC2DQ9UHP7 191 aa1.28□□□□□ -2.2
GTF3C3-209ENST00000466862 KLF12Q9Y4X4 402 aa1.28□□□□□ -2.2
GTF3C3-209ENST00000466862 HES2Q9Y543 173 aa1.28□□□□□ -2.2
GTF3C3-209ENST00000466862 UBIAD1Q9Y5Z9 338 aa1.28□□□□□ -2.2
GTF3C3-209ENST00000466862 SBNO1A3KN83 1393 aa1.28□□□□□ -2.2
GTF3C3-209ENST00000466862 WDR62O43379 1518 aa1.28□□□□□ -2.2
GTF3C3-209ENST00000466862 TUBGCP6Q96RT7 1819 aa1.28□□□□□ -2.2
GTF3C3-209ENST00000466862 NUP214P35658 2090 aaPredicted RBP1.28□□□□□ -2.2
GTF3C3-209ENST00000466862 FCGBPQ9Y6R7 5405 aaPredicted RBP1.27□□□□□ -2.21
GTF3C3-209ENST00000466862 COL27A1Q8IZC6 1860 aaPredicted RBP1.27□□□□□ -2.21
GTF3C3-209ENST00000466862 PALLDQ8WX93 1383 aa1.27□□□□□ -2.21
GTF3C3-209ENST00000466862 PCDH11XQ9BZA7 1347 aa1.27□□□□□ -2.21
GTF3C3-209ENST00000466862 SMIM26A0A096LP01 95 aa1.27□□□□□ -2.21
GTF3C3-209ENST00000466862 A0A0A6YYD5 115 aa1.27□□□□□ -2.21
GTF3C3-209ENST00000466862 IGHV3-66A0A0C4DH42 116 aa1.27□□□□□ -2.21
GTF3C3-209ENST00000466862 A0A0J9YXV3 536 aa1.27□□□□□ -2.21
GTF3C3-209ENST00000466862 ZNF233A6NK53 670 aa1.27□□□□□ -2.21
GTF3C3-209ENST00000466862 K7EN84 100 aa1.27□□□□□ -2.21
GTF3C3-209ENST00000466862 DNASE2O00115 360 aaPredicted RBP1.27□□□□□ -2.21
GTF3C3-209ENST00000466862 GATCO43716 136 aaKnown RBP1.27□□□□□ -2.21
GTF3C3-209ENST00000466862 ENSAO43768 121 aaKnown RBP1.27□□□□□ -2.21
GTF3C3-209ENST00000466862 NDUFS6O75380 124 aaKnown RBP1.27□□□□□ -2.21
GTF3C3-209ENST00000466862 ZMPSTE24O75844 475 aa1.27□□□□□ -2.21
GTF3C3-209ENST00000466862 SEMA3DO95025 777 aa1.27□□□□□ -2.21
GTF3C3-209ENST00000466862 SLC25A14O95258 325 aaPredicted RBP1.27□□□□□ -2.21
GTF3C3-209ENST00000466862 CST4P01036 141 aa1.27□□□□□ -2.21
GTF3C3-209ENST00000466862 BCHEP06276 602 aa1.27□□□□□ -2.21
GTF3C3-209ENST00000466862 CTSLP07711 333 aa1.27□□□□□ -2.21
GTF3C3-209ENST00000466862 NQO2P16083 231 aa1.27□□□□□ -2.21
GTF3C3-209ENST00000466862 HTR1DP28221 377 aa1.27□□□□□ -2.21
GTF3C3-209ENST00000466862 IL12BP29460 328 aa1.27□□□□□ -2.21
GTF3C3-209ENST00000466862 GNRHRP30968 328 aa1.27□□□□□ -2.21
GTF3C3-209ENST00000466862 CD70P32970 193 aa1.27□□□□□ -2.21
GTF3C3-209ENST00000466862 SSTR5P35346 364 aa1.27□□□□□ -2.21
GTF3C3-209ENST00000466862 GGT2P36268 569 aa1.27□□□□□ -2.21
GTF3C3-209ENST00000466862 TALDO1P37837 337 aa1.27□□□□□ -2.21
GTF3C3-209ENST00000466862 MYCNOSP40205 109 aa1.27□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms