RNA–Protein interactions for RNA: ENST00000466732.2

VPS13D-203, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 5

Gene VPS13D, Length 377 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-203ENST00000466732 TGOLN2O43493 480 aa2.74□□□□□ -1.97
VPS13D-203ENST00000466732 HPGDSO60760 199 aa2.74□□□□□ -1.97
VPS13D-203ENST00000466732 EDF1O60869 148 aaKnown RBP2.74□□□□□ -1.97
VPS13D-203ENST00000466732 ADAP1O75689 374 aa2.74□□□□□ -1.97
VPS13D-203ENST00000466732 PIAS1O75925 651 aa2.74□□□□□ -1.97
VPS13D-203ENST00000466732 AQP8O94778 261 aa2.74□□□□□ -1.97
VPS13D-203ENST00000466732 TTC4O95801 387 aa2.74□□□□□ -1.97
VPS13D-203ENST00000466732 RPN2P04844 631 aa2.74□□□□□ -1.97
VPS13D-203ENST00000466732 CRYBA1P05813 215 aa2.74□□□□□ -1.97
VPS13D-203ENST00000466732 DUX4L2P0CJ85 424 aa2.74□□□□□ -1.97
VPS13D-203ENST00000466732 DUX4L3P0CJ86 424 aa2.74□□□□□ -1.97
VPS13D-203ENST00000466732 DUX4L5P0CJ88 424 aa2.74□□□□□ -1.97
VPS13D-203ENST00000466732 DUX4L6P0CJ89 424 aa2.74□□□□□ -1.97
VPS13D-203ENST00000466732 DUX4L7P0CJ90 424 aa2.74□□□□□ -1.97
VPS13D-203ENST00000466732 RD3LP0DJH9 198 aa2.74□□□□□ -1.97
VPS13D-203ENST00000466732 AREGP15514 252 aa2.74□□□□□ -1.97
VPS13D-203ENST00000466732 CYP2F1P24903 491 aa2.74□□□□□ -1.97
VPS13D-203ENST00000466732 GDF1P27539 372 aa2.74□□□□□ -1.97
VPS13D-203ENST00000466732 MAGEA12P43365 314 aa2.74□□□□□ -1.97
VPS13D-203ENST00000466732 MRPL19P49406 292 aaKnown RBP2.74□□□□□ -1.97
VPS13D-203ENST00000466732 CYB561P49447 251 aa2.74□□□□□ -1.97
VPS13D-203ENST00000466732 EVX1P49640 407 aa2.74□□□□□ -1.97
VPS13D-203ENST00000466732 STK19P49842 368 aaPredicted RBP2.74□□□□□ -1.97
VPS13D-203ENST00000466732 TNFSF10P50591 281 aa2.74□□□□□ -1.97
VPS13D-203ENST00000466732 RORCP51449 518 aa2.74□□□□□ -1.97
VPS13D-203ENST00000466732 EFNA3P52797 238 aa2.74□□□□□ -1.97
VPS13D-203ENST00000466732 SLC25A1P53007 311 aa2.74□□□□□ -1.97
VPS13D-203ENST00000466732 CRYBA4P53673 196 aa2.74□□□□□ -1.97
VPS13D-203ENST00000466732 SLC18A1P54219 525 aa2.74□□□□□ -1.97
VPS13D-203ENST00000466732 MAXP61244 160 aa2.74□□□□□ -1.97
VPS13D-203ENST00000466732 LSM6P62312 80 aaKnown RBP2.74□□□□□ -1.97
VPS13D-203ENST00000466732 HERV-K104P63124 156 aa2.74□□□□□ -1.97
VPS13D-203ENST00000466732 CXCL6P80162 114 aa2.74□□□□□ -1.97
VPS13D-203ENST00000466732 PITPNAQ00169 270 aa2.74□□□□□ -1.97
VPS13D-203ENST00000466732 ZNF616Q08AN1 781 aa2.74□□□□□ -1.97
VPS13D-203ENST00000466732 BST1Q10588 318 aa2.74□□□□□ -1.97
VPS13D-203ENST00000466732 PDZK1IP1Q13113 114 aa2.74□□□□□ -1.97
VPS13D-203ENST00000466732 SKP2Q13309 424 aa2.74□□□□□ -1.97
VPS13D-203ENST00000466732 RAB31Q13636 194 aa2.74□□□□□ -1.97
VPS13D-203ENST00000466732 DPYSL3Q14195 570 aa2.74□□□□□ -1.97
VPS13D-203ENST00000466732 SGCBQ16585 318 aa2.74□□□□□ -1.97
VPS13D-203ENST00000466732 NDUFA9Q16795 377 aa2.74□□□□□ -1.97
VPS13D-203ENST00000466732 EXOC3L2Q2M3D2 409 aa2.74□□□□□ -1.97
VPS13D-203ENST00000466732 SMIM21Q3B7S5 101 aa2.74□□□□□ -1.97
VPS13D-203ENST00000466732 ALKBH6Q3KRA9 238 aa2.74□□□□□ -1.97
VPS13D-203ENST00000466732 COX19Q49B96 90 aa2.74□□□□□ -1.97
VPS13D-203ENST00000466732 C5orf47Q569G3 176 aa2.74□□□□□ -1.97
VPS13D-203ENST00000466732 ZNF789Q5FWF6 425 aa2.74□□□□□ -1.97
VPS13D-203ENST00000466732 ZNF691Q5VV52 312 aa2.74□□□□□ -1.97
VPS13D-203ENST00000466732 PRAMEF8Q5VWM4 474 aa2.74□□□□□ -1.97
VPS13D-203ENST00000466732 PRAMEF7Q5VXH5 474 aa2.74□□□□□ -1.97
VPS13D-203ENST00000466732 TTC23Q5W5X9 447 aa2.74□□□□□ -1.97
VPS13D-203ENST00000466732 FAM219BQ5XKK7 198 aa2.74□□□□□ -1.97
VPS13D-203ENST00000466732 FAM183BPQ6ZVS7 135 aa2.74□□□□□ -1.97
VPS13D-203ENST00000466732 SSX7Q7RTT5 188 aa2.74□□□□□ -1.97
VPS13D-203ENST00000466732 TMEM144Q7Z5S9 345 aa2.74□□□□□ -1.97
VPS13D-203ENST00000466732 SLC26A11Q86WA9 606 aa2.74□□□□□ -1.97
VPS13D-203ENST00000466732 UNC93AQ86WB7 457 aa2.74□□□□□ -1.97
VPS13D-203ENST00000466732 CALHM1Q8IU99 346 aa2.74□□□□□ -1.97
VPS13D-203ENST00000466732 DAW1Q8N136 415 aa2.74□□□□□ -1.97
VPS13D-203ENST00000466732 CERS5Q8N5B7 392 aa2.74□□□□□ -1.97
VPS13D-203ENST00000466732 CLDN22Q8N7P3 220 aa2.74□□□□□ -1.97
VPS13D-203ENST00000466732 PXT1Q8NFP0 134 aa2.74□□□□□ -1.97
VPS13D-203ENST00000466732 BPIFB6Q8NFQ5 453 aa2.74□□□□□ -1.97
VPS13D-203ENST00000466732 OR5L2Q8NGL0 311 aa2.74□□□□□ -1.97
VPS13D-203ENST00000466732 OR9Q1Q8NGQ5 310 aa2.74□□□□□ -1.97
VPS13D-203ENST00000466732 OR4C6Q8NH72 309 aa2.74□□□□□ -1.97
VPS13D-203ENST00000466732 FBXO25Q8TCJ0 367 aa2.74□□□□□ -1.97
VPS13D-203ENST00000466732 VN1R17PQ8TDU5 208 aa2.74□□□□□ -1.97
VPS13D-203ENST00000466732 ABHD3Q8WU67 409 aa2.74□□□□□ -1.97
VPS13D-203ENST00000466732 SDR42E1Q8WUS8 393 aa2.74□□□□□ -1.97
VPS13D-203ENST00000466732 C1orf54Q8WWF1 131 aa2.74□□□□□ -1.97
VPS13D-203ENST00000466732 ACOT12Q8WYK0 555 aa2.74□□□□□ -1.97
VPS13D-203ENST00000466732 C11orf40Q8WZ69 217 aa2.74□□□□□ -1.97
VPS13D-203ENST00000466732 BCL2L2Q92843 193 aaPredicted RBP2.74□□□□□ -1.97
VPS13D-203ENST00000466732 GHSRQ92847 366 aa2.74□□□□□ -1.97
VPS13D-203ENST00000466732 FAM46BQ96A09 425 aa2.74□□□□□ -1.97
VPS13D-203ENST00000466732 AMDHD1Q96NU7 426 aa2.74□□□□□ -1.97
VPS13D-203ENST00000466732 OR2V2Q96R30 315 aa2.74□□□□□ -1.97
VPS13D-203ENST00000466732 NICN1Q9BSH3 213 aa2.74□□□□□ -1.97
VPS13D-203ENST00000466732 CCDC32Q9BV29 185 aa2.74□□□□□ -1.97
VPS13D-203ENST00000466732 SRRQ9GZT4 340 aa2.74□□□□□ -1.97
VPS13D-203ENST00000466732 ARV1Q9H2C2 271 aa2.74□□□□□ -1.97
VPS13D-203ENST00000466732 GEMIN7Q9H840 131 aaKnown RBP2.74□□□□□ -1.97
VPS13D-203ENST00000466732 Q9HAA7 133 aa2.74□□□□□ -1.97
VPS13D-203ENST00000466732 RHOFQ9HBH0 211 aa2.74□□□□□ -1.97
VPS13D-203ENST00000466732 SLC25A19Q9HC21 320 aa2.74□□□□□ -1.97
VPS13D-203ENST00000466732 LHX9Q9NQ69 397 aa2.74□□□□□ -1.97
VPS13D-203ENST00000466732 FBXL12Q9NXK8 326 aa2.74□□□□□ -1.97
VPS13D-203ENST00000466732 USE1Q9NZ43 259 aa2.74□□□□□ -1.97
VPS13D-203ENST00000466732 ADA2Q9NZK5 511 aa2.74□□□□□ -1.97
VPS13D-203ENST00000466732 DUX4Q9UBX2 424 aa2.74□□□□□ -1.97
VPS13D-203ENST00000466732 ZNF223Q9UK11 482 aaPredicted RBP2.74□□□□□ -1.97
VPS13D-203ENST00000466732 FBXW2Q9UKT8 454 aa2.74□□□□□ -1.97
VPS13D-203ENST00000466732 KCNK6Q9Y257 313 aa2.74□□□□□ -1.97
VPS13D-203ENST00000466732 GSTK1Q9Y2Q3 226 aa2.74□□□□□ -1.97
VPS13D-203ENST00000466732 ZNF337Q9Y3M9 751 aa2.74□□□□□ -1.97
VPS13D-203ENST00000466732 URGCP-MRPS24S4R325 110 aa2.74□□□□□ -1.97
VPS13D-203ENST00000466732 VWDEQ8N2E2 1590 aa2.74□□□□□ -1.97
VPS13D-203ENST00000466732 MARF1Q9Y4F3 1742 aaKnown RBP2.73□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms