RNA–Protein interactions for RNA: ENST00000466410.5

LIMS2-212, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2

Gene LIMS2, Length 2,592 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-212ENST00000466410 DCUN1D4Q92564 292 aa17.05■□□□□ 0.32
LIMS2-212ENST00000466410 LYZL4Q96KX0 146 aa17.05■□□□□ 0.32
LIMS2-212ENST00000466410 CHCHD2Q9Y6H1 151 aaPredicted RBP17.05■□□□□ 0.32
LIMS2-212ENST00000466410 U3KQA8 63 aa17.05■□□□□ 0.32
LIMS2-212ENST00000466410 ADAP1O75689 374 aa17.04■□□□□ 0.32
LIMS2-212ENST00000466410 STARD6P59095 220 aa17.04■□□□□ 0.32
LIMS2-212ENST00000466410 DEFA5Q01523 94 aa17.04■□□□□ 0.32
LIMS2-212ENST00000466410 ARFRP1Q13795 201 aa17.04■□□□□ 0.32
LIMS2-212ENST00000466410 CRIP3Q6Q6R5 217 aa17.04■□□□□ 0.32
LIMS2-212ENST00000466410 DTX1Q86Y01 620 aa17.04■□□□□ 0.32
LIMS2-212ENST00000466410 OR1S2Q8NGQ3 325 aa17.04■□□□□ 0.32
LIMS2-212ENST00000466410 RRNAD1Q96FB5 475 aaKnown RBP17.04■□□□□ 0.32
LIMS2-212ENST00000466410 CCDC74BQ96LY2 380 aa17.04■□□□□ 0.32
LIMS2-212ENST00000466410 OCSTAMPQ9BR26 566 aa17.04■□□□□ 0.32
LIMS2-212ENST00000466410 HDGFL3Q9Y3E1 203 aa17.04■□□□□ 0.32
LIMS2-212ENST00000466410 COL6A3P12111 3177 aa17.04■□□□□ 0.32
LIMS2-212ENST00000466410 SDK2Q58EX2 2172 aa17.04■□□□□ 0.32
LIMS2-212ENST00000466410 H0YIZ8 118 aa17.04■□□□□ 0.32
LIMS2-212ENST00000466410 GDF9O60383 454 aa17.04■□□□□ 0.32
LIMS2-212ENST00000466410 CELA2AP08217 269 aa17.04■□□□□ 0.32
LIMS2-212ENST00000466410 CLEC18BQ6UXF7 455 aa17.04■□□□□ 0.32
LIMS2-212ENST00000466410 TMEM17Q86X19 198 aa17.04■□□□□ 0.32
LIMS2-212ENST00000466410 SLC25A43Q8WUT9 341 aaPredicted RBP17.04■□□□□ 0.32
LIMS2-212ENST00000466410 PIK3IP1Q96FE7 263 aa17.04■□□□□ 0.32
LIMS2-212ENST00000466410 LRRC46Q96FV0 321 aa17.04■□□□□ 0.32
LIMS2-212ENST00000466410 NARS2Q96I59 477 aaKnown RBP17.04■□□□□ 0.32
LIMS2-212ENST00000466410 ST6GALNAC5Q9BVH7 336 aa17.04■□□□□ 0.32
LIMS2-212ENST00000466410 PCDHB10Q9UN67 800 aa17.04■□□□□ 0.32
LIMS2-212ENST00000466410 CEACAM18A8MTB9 384 aa17.03■□□□□ 0.32
LIMS2-212ENST00000466410 MPTX1A8MV57 137 aa17.03■□□□□ 0.32
LIMS2-212ENST00000466410 DHPSP49366 369 aaPredicted RBP17.03■□□□□ 0.32
LIMS2-212ENST00000466410 GRB2P62993 217 aaKnown RBP17.03■□□□□ 0.32
LIMS2-212ENST00000466410 KISS1Q15726 138 aa17.03■□□□□ 0.32
LIMS2-212ENST00000466410 ZNF239Q16600 458 aaKnown RBP17.03■□□□□ 0.32
LIMS2-212ENST00000466410 PNLIPRP3Q17RR3 467 aa17.03■□□□□ 0.32
LIMS2-212ENST00000466410 BHLHE23Q8NDY6 225 aa17.03■□□□□ 0.32
LIMS2-212ENST00000466410 OR5H2Q8NGV7 314 aa17.03■□□□□ 0.32
LIMS2-212ENST00000466410 PGAM5Q96HS1 289 aa17.03■□□□□ 0.32
LIMS2-212ENST00000466410 URM1Q9BTM9 101 aaKnown RBP17.03■□□□□ 0.32
LIMS2-212ENST00000466410 NMES1Q9C002 83 aa17.03■□□□□ 0.32
LIMS2-212ENST00000466410 OR10A2Q9H208 303 aa17.03■□□□□ 0.32
LIMS2-212ENST00000466410 SDCBPO00560 298 aaPredicted RBP17.03■□□□□ 0.32
LIMS2-212ENST00000466410 HTR3BO95264 441 aa17.03■□□□□ 0.32
LIMS2-212ENST00000466410 AMY2BP19961 511 aa17.03■□□□□ 0.32
LIMS2-212ENST00000466410 SUPT4H1P63272 117 aaKnown RBP17.03■□□□□ 0.32
LIMS2-212ENST00000466410 MC2RQ01718 297 aa17.03■□□□□ 0.32
LIMS2-212ENST00000466410 ACTBL2Q562R1 376 aa17.03■□□□□ 0.32
LIMS2-212ENST00000466410 PHYHD1Q5SRE7 291 aa17.03■□□□□ 0.32
LIMS2-212ENST00000466410 PPP1R3BQ86XI6 285 aa17.03■□□□□ 0.32
LIMS2-212ENST00000466410 OR51T1Q8NGJ9 327 aa17.03■□□□□ 0.32
LIMS2-212ENST00000466410 OR13G1Q8NGZ3 307 aa17.03■□□□□ 0.32
LIMS2-212ENST00000466410 MAFIPQ8WZ33 124 aa17.03■□□□□ 0.32
LIMS2-212ENST00000466410 RTBDNQ9BSG5 229 aaPredicted RBP17.03■□□□□ 0.32
LIMS2-212ENST00000466410 FSCN3Q9NQT6 498 aa17.03■□□□□ 0.32
LIMS2-212ENST00000466410 C19orf25Q9UFG5 118 aaPredicted RBP17.03■□□□□ 0.32
LIMS2-212ENST00000466410 TRBV6-7A0A0A0MS04 114 aa17.02■□□□□ 0.32
LIMS2-212ENST00000466410 LOC102725191A0A1B0GVB3 256 aa17.02■□□□□ 0.32
LIMS2-212ENST00000466410 F5H5K5 113 aa17.02■□□□□ 0.32
LIMS2-212ENST00000466410 SFT2D2O95562 160 aa17.02■□□□□ 0.32
LIMS2-212ENST00000466410 EIF1P41567 113 aaKnown RBP17.02■□□□□ 0.32
LIMS2-212ENST00000466410 SLC35A1P78382 337 aa17.02■□□□□ 0.32
LIMS2-212ENST00000466410 ZSCAN4Q8NAM6 433 aaPredicted RBP17.02■□□□□ 0.32
LIMS2-212ENST00000466410 ZC4H2Q9NQZ6 224 aa17.02■□□□□ 0.32
LIMS2-212ENST00000466410 OCIAD1Q9NX40 245 aa17.02■□□□□ 0.32
LIMS2-212ENST00000466410 PRELID1Q9Y255 219 aa17.02■□□□□ 0.32
LIMS2-212ENST00000466410 TEX13DA0A0J9YY54 714 aaPredicted RBP17.02■□□□□ 0.31
LIMS2-212ENST00000466410 K7ESF4 209 aa17.02■□□□□ 0.31
LIMS2-212ENST00000466410 DNASE2O00115 360 aaPredicted RBP17.02■□□□□ 0.31
LIMS2-212ENST00000466410 SIGLEC6O43699 453 aa17.02■□□□□ 0.31
LIMS2-212ENST00000466410 TLX3O43711 291 aaPredicted RBP17.02■□□□□ 0.31
LIMS2-212ENST00000466410 ONECUT2O95948 504 aa17.02■□□□□ 0.31
LIMS2-212ENST00000466410 PNLIPP16233 465 aa17.02■□□□□ 0.31
LIMS2-212ENST00000466410 ADH6P28332 368 aa17.02■□□□□ 0.31
LIMS2-212ENST00000466410 EPHA8P29322 1005 aaPredicted RBP17.02■□□□□ 0.31
LIMS2-212ENST00000466410 PTGFRP43088 359 aa17.02■□□□□ 0.31
LIMS2-212ENST00000466410 RSPO4Q2I0M5 234 aaPredicted RBP17.02■□□□□ 0.31
LIMS2-212ENST00000466410 FAM89BQ8N5H3 189 aa17.02■□□□□ 0.31
LIMS2-212ENST00000466410 MARC2Q969Z3 335 aa17.02■□□□□ 0.31
LIMS2-212ENST00000466410 ZNF160Q9HCG1 818 aa17.02■□□□□ 0.31
LIMS2-212ENST00000466410 ASF1BQ9NVP2 202 aa17.02■□□□□ 0.31
LIMS2-212ENST00000466410 FLVCR1Q9Y5Y0 555 aa17.02■□□□□ 0.31
LIMS2-212ENST00000466410 VPS13AQ96RL7 3174 aa17.01■□□□□ 0.31
LIMS2-212ENST00000466410 IGHV3-15A0A0B4J1V0 119 aa17.01■□□□□ 0.31
LIMS2-212ENST00000466410 OR5H15A6NDH6 313 aa17.01■□□□□ 0.31
LIMS2-212ENST00000466410 F8VVB4 439 aa17.01■□□□□ 0.31
LIMS2-212ENST00000466410 F8VWA3 439 aa17.01■□□□□ 0.31
LIMS2-212ENST00000466410 TOR1AO14656 332 aa17.01■□□□□ 0.31
LIMS2-212ENST00000466410 CTRB1P17538 263 aa17.01■□□□□ 0.31
LIMS2-212ENST00000466410 SLC6A9P48067 706 aa17.01■□□□□ 0.31
LIMS2-212ENST00000466410 ECH1Q13011 328 aa17.01■□□□□ 0.31
LIMS2-212ENST00000466410 ANKRD55Q3KP44 614 aa17.01■□□□□ 0.31
LIMS2-212ENST00000466410 AADACL3Q5VUY0 350 aa17.01■□□□□ 0.31
LIMS2-212ENST00000466410 CTRB2Q6GPI1 263 aa17.01■□□□□ 0.31
LIMS2-212ENST00000466410 FAM219AQ8IW50 185 aa17.01■□□□□ 0.31
LIMS2-212ENST00000466410 PIGMQ9H3S5 423 aa17.01■□□□□ 0.31
LIMS2-212ENST00000466410 ATP6V1G2-DDX39BF2Z307 99 aa17.01■□□□□ 0.31
LIMS2-212ENST00000466410 STMND1H3BQB6 276 aa17.01■□□□□ 0.31
LIMS2-212ENST00000466410 PRF1P14222 555 aa17.01■□□□□ 0.31
LIMS2-212ENST00000466410 FPR2P25090 351 aa17.01■□□□□ 0.31
LIMS2-212ENST00000466410 CTSSP25774 331 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms