RNA–Protein interactions for RNA: ENST00000466285.1

COL6A1-203, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 3

Gene COL6A1, Length 500 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-203ENST00000466285 OR5T2Q8NGG2 359 aa16.93■□□□□ 0.3
COL6A1-203ENST00000466285 RBM4BQ9BQ04 359 aaKnown RBP16.93■□□□□ 0.3
COL6A1-203ENST00000466285 WDR13Q9H1Z4 485 aa16.93■□□□□ 0.3
COL6A1-203ENST00000466285 NOP16Q9Y3C1 178 aaKnown RBP16.93■□□□□ 0.3
COL6A1-203ENST00000466285 RHBDD3Q9Y3P4 386 aa16.93■□□□□ 0.3
COL6A1-203ENST00000466285 U3KQV3 271 aa16.93■□□□□ 0.3
COL6A1-203ENST00000466285 A0A1B0GUS0 222 aa16.92■□□□□ 0.3
COL6A1-203ENST00000466285 XRCC2O43543 280 aa16.92■□□□□ 0.3
COL6A1-203ENST00000466285 LIPFP07098 398 aa16.92■□□□□ 0.3
COL6A1-203ENST00000466285 ACKR3P25106 362 aa16.92■□□□□ 0.3
COL6A1-203ENST00000466285 FMO3P31513 532 aa16.92■□□□□ 0.3
COL6A1-203ENST00000466285 SLC25A1P53007 311 aa16.92■□□□□ 0.3
COL6A1-203ENST00000466285 GYS2P54840 703 aa16.92■□□□□ 0.3
COL6A1-203ENST00000466285 ZNF121P58317 390 aaPredicted RBP16.92■□□□□ 0.3
COL6A1-203ENST00000466285 IKZF1Q13422 519 aa16.92■□□□□ 0.3
COL6A1-203ENST00000466285 TAF13Q15543 124 aa16.92■□□□□ 0.3
COL6A1-203ENST00000466285 CDONQ4KMG0 1287 aa16.92■□□□□ 0.3
COL6A1-203ENST00000466285 DPY19L4Q7Z388 723 aa16.92■□□□□ 0.3
COL6A1-203ENST00000466285 C1QL4Q86Z23 238 aa16.92■□□□□ 0.3
COL6A1-203ENST00000466285 OR8S1Q8NH09 359 aa16.92■□□□□ 0.3
COL6A1-203ENST00000466285 DYRK2Q92630 601 aa16.92■□□□□ 0.3
COL6A1-203ENST00000466285 ABHD6Q9BV23 337 aa16.92■□□□□ 0.3
COL6A1-203ENST00000466285 TRIM15Q9C019 465 aa16.92■□□□□ 0.3
COL6A1-203ENST00000466285 BRD7Q9NPI1 651 aa16.92■□□□□ 0.3
COL6A1-203ENST00000466285 SNTG1Q9NSN8 517 aa16.92■□□□□ 0.3
COL6A1-203ENST00000466285 KLHDC2Q9Y2U9 406 aa16.92■□□□□ 0.3
COL6A1-203ENST00000466285 CDIPTO14735 213 aa16.91■□□□□ 0.3
COL6A1-203ENST00000466285 CCNB2O95067 398 aa16.91■□□□□ 0.3
COL6A1-203ENST00000466285 GSK3AP49840 483 aa16.91■□□□□ 0.3
COL6A1-203ENST00000466285 TIGD6Q17RP2 521 aa16.91■□□□□ 0.3
COL6A1-203ENST00000466285 TEX30Q5JUR7 227 aa16.91■□□□□ 0.3
COL6A1-203ENST00000466285 STUMQ69YW2 141 aa16.91■□□□□ 0.3
COL6A1-203ENST00000466285 RPL13AP3Q6NVV1 102 aa16.91■□□□□ 0.3
COL6A1-203ENST00000466285 ERI1Q8IV48 349 aaKnown RBP16.91■□□□□ 0.3
COL6A1-203ENST00000466285 OR6N2Q8NGY6 317 aa16.91■□□□□ 0.3
COL6A1-203ENST00000466285 ITPKCQ96DU7 683 aa16.91■□□□□ 0.3
COL6A1-203ENST00000466285 NIPSNAP1Q9BPW8 284 aa16.91■□□□□ 0.3
COL6A1-203ENST00000466285 ELL3Q9HB65 397 aaPredicted RBP16.91■□□□□ 0.3
COL6A1-203ENST00000466285 C14orf119Q9NWQ9 140 aa16.91■□□□□ 0.3
COL6A1-203ENST00000466285 ZNRD1Q9P1U0 126 aa16.91■□□□□ 0.3
COL6A1-203ENST00000466285 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP16.9■□□□□ 0.3
COL6A1-203ENST00000466285 ANKRD30BLA7E2S9 258 aa16.9■□□□□ 0.3
COL6A1-203ENST00000466285 NDUFA2O43678 99 aa16.9■□□□□ 0.3
COL6A1-203ENST00000466285 OCLNQ16625 522 aa16.9■□□□□ 0.3
COL6A1-203ENST00000466285 LINC00471Q8N535 108 aa16.9■□□□□ 0.3
COL6A1-203ENST00000466285 SPERTQ8NA61 448 aa16.9■□□□□ 0.3
COL6A1-203ENST00000466285 TBC1D15Q8TC07 691 aa16.9■□□□□ 0.3
COL6A1-203ENST00000466285 RNF133Q8WVZ7 376 aa16.9■□□□□ 0.3
COL6A1-203ENST00000466285 C17orf50Q8WW18 174 aa16.9■□□□□ 0.3
COL6A1-203ENST00000466285 HPSE2Q8WWQ2 592 aa16.9■□□□□ 0.3
COL6A1-203ENST00000466285 RPL3LQ92901 407 aaKnown RBP16.9■□□□□ 0.3
COL6A1-203ENST00000466285 LYZL4Q96KX0 146 aa16.9■□□□□ 0.3
COL6A1-203ENST00000466285 PKP2Q99959 881 aa16.9■□□□□ 0.3
COL6A1-203ENST00000466285 PAPOLGQ9BWT3 736 aaKnown RBP16.9■□□□□ 0.3
COL6A1-203ENST00000466285 TLNRD1Q9H1K6 362 aa16.9■□□□□ 0.3
COL6A1-203ENST00000466285 MMP27Q9H306 513 aa16.9■□□□□ 0.3
COL6A1-203ENST00000466285 CNTD2Q9H8S5 307 aa16.9■□□□□ 0.3
COL6A1-203ENST00000466285 TRIM36Q9NQ86 728 aa16.9■□□□□ 0.3
COL6A1-203ENST00000466285 KIF17Q9P2E2 1029 aa16.9■□□□□ 0.3
COL6A1-203ENST00000466285 TAGLN3Q9UI15 199 aa16.9■□□□□ 0.3
COL6A1-203ENST00000466285 KPTNQ9Y664 436 aa16.9■□□□□ 0.3
COL6A1-203ENST00000466285 CLPXO76031 633 aa16.89■□□□□ 0.29
COL6A1-203ENST00000466285 PAX6P26367 422 aa16.89■□□□□ 0.29
COL6A1-203ENST00000466285 OPRL1P41146 370 aa16.89■□□□□ 0.29
COL6A1-203ENST00000466285 DGUOKQ16854 277 aa16.89■□□□□ 0.29
COL6A1-203ENST00000466285 DMRTC1Q5HYR2 192 aa16.89■□□□□ 0.29
COL6A1-203ENST00000466285 TNFRSF14Q92956 283 aa16.89■□□□□ 0.29
COL6A1-203ENST00000466285 GAFA1Q96PS6 74 aa16.89■□□□□ 0.29
COL6A1-203ENST00000466285 OPA3Q9H6K4 179 aa16.89■□□□□ 0.29
COL6A1-203ENST00000466285 RNPEPL1Q9HAU8 725 aa16.89■□□□□ 0.29
COL6A1-203ENST00000466285 PRPF19Q9UMS4 504 aaKnown RBP16.89■□□□□ 0.29
COL6A1-203ENST00000466285 TET2Q6N021 2002 aaPredicted RBP16.88■□□□□ 0.29
COL6A1-203ENST00000466285 M0QZ24 198 aa16.88■□□□□ 0.29
COL6A1-203ENST00000466285 SELENOFO60613 162 aa16.88■□□□□ 0.29
COL6A1-203ENST00000466285 KRT36O76013 467 aa16.88■□□□□ 0.29
COL6A1-203ENST00000466285 HSD11B1P28845 292 aa16.88■□□□□ 0.29
COL6A1-203ENST00000466285 GRB2P62993 217 aaKnown RBP16.88■□□□□ 0.29
COL6A1-203ENST00000466285 MXRA7P84157 204 aa16.88■□□□□ 0.29
COL6A1-203ENST00000466285 MICBQ29980 383 aa16.88■□□□□ 0.29
COL6A1-203ENST00000466285 TIGD4Q8IY51 512 aa16.88■□□□□ 0.29
COL6A1-203ENST00000466285 ZSCAN4Q8NAM6 433 aaPredicted RBP16.88■□□□□ 0.29
COL6A1-203ENST00000466285 OR2T33Q8NG76 320 aa16.88■□□□□ 0.29
COL6A1-203ENST00000466285 INTS14Q96SY0 518 aa16.88■□□□□ 0.29
COL6A1-203ENST00000466285 DCTN5Q9BTE1 182 aa16.88■□□□□ 0.29
COL6A1-203ENST00000466285 A0A1B0GVI7 797 aa16.87■□□□□ 0.29
COL6A1-203ENST00000466285 MEGF11A6BM72 1044 aa16.87■□□□□ 0.29
COL6A1-203ENST00000466285 AKR7A2O43488 359 aa16.87■□□□□ 0.29
COL6A1-203ENST00000466285 ECDO95905 644 aaPredicted RBP16.87■□□□□ 0.29
COL6A1-203ENST00000466285 MUC1P15941 1255 aaPredicted RBP16.87■□□□□ 0.29
COL6A1-203ENST00000466285 TGM4P49221 684 aa16.87■□□□□ 0.29
COL6A1-203ENST00000466285 MS4A2Q01362 244 aa16.87■□□□□ 0.29
COL6A1-203ENST00000466285 PRDX4Q13162 271 aa16.87■□□□□ 0.29
COL6A1-203ENST00000466285 H1FXQ92522 213 aaKnown RBP16.87■□□□□ 0.29
COL6A1-203ENST00000466285 DGCR6LQ9BY27 220 aa16.87■□□□□ 0.29
COL6A1-203ENST00000466285 CMC2Q9NRP2 79 aa16.87■□□□□ 0.29
COL6A1-203ENST00000466285 ACTR3BQ9P1U1 418 aa16.87■□□□□ 0.29
COL6A1-203ENST00000466285 VPREB3Q9UKI3 123 aa16.87■□□□□ 0.29
COL6A1-203ENST00000466285 SIGLEC9Q9Y336 463 aa16.87■□□□□ 0.29
COL6A1-203ENST00000466285 SAMHD1Q9Y3Z3 626 aaKnown RBP16.87■□□□□ 0.29
COL6A1-203ENST00000466285 SLC22A31A6NKX4 558 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms