RNA–Protein interactions for RNA: ENST00000466100.1

VCP-204, Transcript of valosin containing protein, humanhuman

TSL 2

Gene VCP, Length 508 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-204ENST00000466100 ZNF12P17014 697 aa9.51□□□□□ -0.89
VCP-204ENST00000466100 GALP22466 123 aa9.51□□□□□ -0.89
VCP-204ENST00000466100 GADD45AP24522 165 aa9.51□□□□□ -0.89
VCP-204ENST00000466100 TTKP33981 857 aa9.51□□□□□ -0.89
VCP-204ENST00000466100 SOX2P48431 317 aa9.51□□□□□ -0.89
VCP-204ENST00000466100 RIPPLY1Q0D2K3 151 aa9.51□□□□□ -0.89
VCP-204ENST00000466100 BLMHQ13867 455 aa9.51□□□□□ -0.89
VCP-204ENST00000466100 ZMAT1Q5H9K5 638 aa9.51□□□□□ -0.89
VCP-204ENST00000466100 FAM27D1Q5T7N8 215 aa9.51□□□□□ -0.89
VCP-204ENST00000466100 ZNF787Q6DD87 383 aa9.51□□□□□ -0.89
VCP-204ENST00000466100 ZNF529Q6P280 563 aa9.51□□□□□ -0.89
VCP-204ENST00000466100 MUC15Q8N387 334 aa9.51□□□□□ -0.89
VCP-204ENST00000466100 PARP16Q8N5Y8 322 aa9.51□□□□□ -0.89
VCP-204ENST00000466100 BHLHE23Q8NDY6 225 aa9.51□□□□□ -0.89
VCP-204ENST00000466100 CSNK2A3Q8NEV1 391 aa9.51□□□□□ -0.89
VCP-204ENST00000466100 OR13C3Q8NGS6 347 aa9.51□□□□□ -0.89
VCP-204ENST00000466100 TSEN15Q8WW01 171 aaKnown RBP9.51□□□□□ -0.89
VCP-204ENST00000466100 GTF3AQ92664 365 aaKnown RBP9.51□□□□□ -0.89
VCP-204ENST00000466100 C10orf35Q96D05 121 aa9.51□□□□□ -0.89
VCP-204ENST00000466100 SLC30A2Q9BRI3 323 aa9.51□□□□□ -0.89
VCP-204ENST00000466100 FGF23Q9GZV9 251 aaPredicted RBP9.51□□□□□ -0.89
VCP-204ENST00000466100 PPIL3Q9H2H8 161 aaKnown RBP9.51□□□□□ -0.89
VCP-204ENST00000466100 PPP1R3EQ9H7J1 279 aa9.51□□□□□ -0.89
VCP-204ENST00000466100 MRPL15Q9P015 296 aaKnown RBP9.51□□□□□ -0.89
VCP-204ENST00000466100 DUSP13Q9UII6 198 aa9.51□□□□□ -0.89
VCP-204ENST00000466100 DHDHQ9UQ10 334 aa9.51□□□□□ -0.89
VCP-204ENST00000466100 PIGLQ9Y2B2 252 aa9.51□□□□□ -0.89
VCP-204ENST00000466100 RHBDD3Q9Y3P4 386 aa9.51□□□□□ -0.89
VCP-204ENST00000466100 ZNF816-ZNF321PA0A0X1KG74 233 aa9.5□□□□□ -0.89
VCP-204ENST00000466100 TRDV1A0A1B0GX56 115 aa9.5□□□□□ -0.89
VCP-204ENST00000466100 A6NIN4 97 aa9.5□□□□□ -0.89
VCP-204ENST00000466100 ZSCAN5BA6NJL1 495 aa9.5□□□□□ -0.89
VCP-204ENST00000466100 B9A039 149 aa9.5□□□□□ -0.89
VCP-204ENST00000466100 GABRPO00591 440 aa9.5□□□□□ -0.89
VCP-204ENST00000466100 MLNRO43193 412 aa9.5□□□□□ -0.89
VCP-204ENST00000466100 TIMM8AO60220 97 aaPredicted RBP9.5□□□□□ -0.89
VCP-204ENST00000466100 GPX5O75715 221 aa9.5□□□□□ -0.89
VCP-204ENST00000466100 GATBO75879 557 aaKnown RBP9.5□□□□□ -0.89
VCP-204ENST00000466100 HLA-DPB1P04440 258 aa9.5□□□□□ -0.89
VCP-204ENST00000466100 SOD3P08294 240 aa9.5□□□□□ -0.89
VCP-204ENST00000466100 UCHL1P09936 223 aa9.5□□□□□ -0.89
VCP-204ENST00000466100 OCM2P0CE71 109 aa9.5□□□□□ -0.89
VCP-204ENST00000466100 IGFBP3P17936 291 aaPredicted RBP9.5□□□□□ -0.89
VCP-204ENST00000466100 FSTP19883 344 aa9.5□□□□□ -0.89
VCP-204ENST00000466100 SSTR2P30874 369 aa9.5□□□□□ -0.89
VCP-204ENST00000466100 ACSM3Q53FZ2 586 aa9.5□□□□□ -0.89
VCP-204ENST00000466100 SLC16A12Q6ZSM3 486 aa9.5□□□□□ -0.89
VCP-204ENST00000466100 UTS2BQ765I0 119 aa9.5□□□□□ -0.89
VCP-204ENST00000466100 OR5AS1Q8N127 324 aa9.5□□□□□ -0.89
VCP-204ENST00000466100 FBXL14Q8N1E6 418 aa9.5□□□□□ -0.89
VCP-204ENST00000466100 OR8G5Q8NG78 346 aa9.5□□□□□ -0.89
VCP-204ENST00000466100 HPSE2Q8WWQ2 592 aa9.5□□□□□ -0.89
VCP-204ENST00000466100 RPL3LQ92901 407 aaKnown RBP9.5□□□□□ -0.89
VCP-204ENST00000466100 PIGTQ969N2 578 aa9.5□□□□□ -0.89
VCP-204ENST00000466100 TMEM106AQ96A25 262 aa9.5□□□□□ -0.89
VCP-204ENST00000466100 MARVELD3Q96A59 401 aa9.5□□□□□ -0.89
VCP-204ENST00000466100 FGGYQ96C11 551 aa9.5□□□□□ -0.89
VCP-204ENST00000466100 TRAF4Q9BUZ4 470 aaPredicted RBP9.5□□□□□ -0.89
VCP-204ENST00000466100 FUNDC2Q9BWH2 189 aa9.5□□□□□ -0.89
VCP-204ENST00000466100 CHST5Q9GZS9 411 aa9.5□□□□□ -0.89
VCP-204ENST00000466100 OR51E2Q9H255 320 aa9.5□□□□□ -0.89
VCP-204ENST00000466100 UBTD1Q9HAC8 227 aa9.5□□□□□ -0.89
VCP-204ENST00000466100 TAAR3PQ9P1P4 343 aa9.5□□□□□ -0.89
VCP-204ENST00000466100 CGGBP1Q9UFW8 167 aaPredicted RBP9.5□□□□□ -0.89
VCP-204ENST00000466100 ENPP5Q9UJA9 477 aa9.5□□□□□ -0.89
VCP-204ENST00000466100 STUB1Q9UNE7 303 aa9.5□□□□□ -0.89
VCP-204ENST00000466100 ARID1AO14497 2285 aa9.49□□□□□ -0.89
VCP-204ENST00000466100 TRAV8-7A0A075B6U6 113 aa9.49□□□□□ -0.89
VCP-204ENST00000466100 IGKV1-9A0A0C4DH69 117 aa9.49□□□□□ -0.89
VCP-204ENST00000466100 A0A1W2PPW3 197 aa9.49□□□□□ -0.89
VCP-204ENST00000466100 VSTM5A8MXK1 200 aa9.49□□□□□ -0.89
VCP-204ENST00000466100 SERPINA3P01011 423 aa9.49□□□□□ -0.89
VCP-204ENST00000466100 RAF1P04049 648 aa9.49□□□□□ -0.89
VCP-204ENST00000466100 ADH4P08319 380 aa9.49□□□□□ -0.89
VCP-204ENST00000466100 PRF1P14222 555 aa9.49□□□□□ -0.89
VCP-204ENST00000466100 FGF9P31371 208 aaPredicted RBP9.49□□□□□ -0.89
VCP-204ENST00000466100 ALDH3B1P43353 468 aa9.49□□□□□ -0.89
VCP-204ENST00000466100 SELENOVP59797 346 aa9.49□□□□□ -0.89
VCP-204ENST00000466100 C20orf204Q6ZNR8 217 aa9.49□□□□□ -0.89
VCP-204ENST00000466100 GPR141Q7Z602 305 aa9.49□□□□□ -0.89
VCP-204ENST00000466100 SATL1Q86VE3 508 aa9.49□□□□□ -0.89
VCP-204ENST00000466100 TMEM200AQ86VY9 491 aa9.49□□□□□ -0.89
VCP-204ENST00000466100 PP6455Q8WZ26 134 aa9.49□□□□□ -0.89
VCP-204ENST00000466100 THRSPQ92748 146 aa9.49□□□□□ -0.89
VCP-204ENST00000466100 ORAI1Q96D31 301 aa9.49□□□□□ -0.89
VCP-204ENST00000466100 ITPKCQ96DU7 683 aa9.49□□□□□ -0.89
VCP-204ENST00000466100 RBM38Q9H0Z9 239 aaKnown RBP9.49□□□□□ -0.89
VCP-204ENST00000466100 PLEKHA1Q9HB21 404 aa9.49□□□□□ -0.89
VCP-204ENST00000466100 MSL2Q9HCI7 577 aa9.49□□□□□ -0.89
VCP-204ENST00000466100 NOX4Q9NPH5 578 aa9.49□□□□□ -0.89
VCP-204ENST00000466100 CBLN4Q9NTU7 201 aa9.49□□□□□ -0.89
VCP-204ENST00000466100 GPR160Q9UJ42 338 aa9.49□□□□□ -0.89
VCP-204ENST00000466100 SHISA3A0PJX4 238 aa9.48□□□□□ -0.89
VCP-204ENST00000466100 ANKRD61A6NGH8 418 aa9.48□□□□□ -0.89
VCP-204ENST00000466100 ANKRD30BLA7E2S9 258 aa9.48□□□□□ -0.89
VCP-204ENST00000466100 ZNF850A8MQ14 1090 aa9.48□□□□□ -0.89
VCP-204ENST00000466100 H0YL77 283 aa9.48□□□□□ -0.89
VCP-204ENST00000466100 M0R233 179 aa9.48□□□□□ -0.89
VCP-204ENST00000466100 GMDSO60547 372 aa9.48□□□□□ -0.89
VCP-204ENST00000466100 ALX3O95076 343 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms