RNA–Protein interactions for RNA: ENST00000454830.6

CLK3-203, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 3,787 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-203ENST00000454830 C7orf66A4D0T2 115 aa11.95□□□□□ -0.5
CLK3-203ENST00000454830 AKR7A2O43488 359 aa11.95□□□□□ -0.5
CLK3-203ENST00000454830 ANGPTL7O43827 346 aa11.95□□□□□ -0.5
CLK3-203ENST00000454830 NME2P1O60361 137 aa11.95□□□□□ -0.5
CLK3-203ENST00000454830 CSTBP04080 98 aaKnown RBP11.95□□□□□ -0.5
CLK3-203ENST00000454830 NME2P22392 152 aa11.95□□□□□ -0.5
CLK3-203ENST00000454830 FOXG1P55316 489 aaPredicted RBP11.95□□□□□ -0.5
CLK3-203ENST00000454830 CXADRP78310 365 aa11.95□□□□□ -0.5
CLK3-203ENST00000454830 TNK1Q13470 666 aa11.95□□□□□ -0.5
CLK3-203ENST00000454830 CD276Q5ZPR3 534 aa11.95□□□□□ -0.5
CLK3-203ENST00000454830 DRAM2Q6UX65 266 aa11.95□□□□□ -0.5
CLK3-203ENST00000454830 ASCC1Q8N9N2 400 aaKnown RBP11.95□□□□□ -0.5
CLK3-203ENST00000454830 OR2H1Q9GZK4 316 aa11.95□□□□□ -0.5
CLK3-203ENST00000454830 SCP2D1Q9UJQ7 156 aa11.95□□□□□ -0.5
CLK3-203ENST00000454830 MGAT4AQ9UM21 535 aa11.95□□□□□ -0.5
CLK3-203ENST00000454830 MRPS18CQ9Y3D5 142 aaKnown RBP11.95□□□□□ -0.5
CLK3-203ENST00000454830 RAB27BO00194 218 aa11.95□□□□□ -0.5
CLK3-203ENST00000454830 SOCS1O15524 211 aa11.95□□□□□ -0.5
CLK3-203ENST00000454830 NOS1APO75052 506 aaPredicted RBP11.95□□□□□ -0.5
CLK3-203ENST00000454830 NDUFB6O95139 128 aa11.95□□□□□ -0.5
CLK3-203ENST00000454830 HTR3BO95264 441 aa11.95□□□□□ -0.5
CLK3-203ENST00000454830 GABRR1P24046 479 aa11.95□□□□□ -0.5
CLK3-203ENST00000454830 GZMKP49863 264 aa11.95□□□□□ -0.5
CLK3-203ENST00000454830 ECH1Q13011 328 aa11.95□□□□□ -0.5
CLK3-203ENST00000454830 OLFML2AQ68BL7 652 aa11.95□□□□□ -0.5
CLK3-203ENST00000454830 PAQR4Q8N4S7 273 aaPredicted RBP11.95□□□□□ -0.5
CLK3-203ENST00000454830 EIF3KQ9UBQ5 218 aaKnown RBP11.95□□□□□ -0.5
CLK3-203ENST00000454830 IGKV1-9A0A0C4DH69 117 aa11.94□□□□□ -0.5
CLK3-203ENST00000454830 C1QBP02746 253 aa11.94□□□□□ -0.5
CLK3-203ENST00000454830 UBE2V2Q15819 145 aa11.94□□□□□ -0.5
CLK3-203ENST00000454830 RSPO1Q2MKA7 263 aaPredicted RBP11.94□□□□□ -0.5
CLK3-203ENST00000454830 FDCSPQ8NFU4 85 aa11.94□□□□□ -0.5
CLK3-203ENST00000454830 OR10R2Q8NGX6 335 aa11.94□□□□□ -0.5
CLK3-203ENST00000454830 PRAF2O60831 178 aa11.94□□□□□ -0.5
CLK3-203ENST00000454830 ZNF708P17019 499 aa11.94□□□□□ -0.5
CLK3-203ENST00000454830 DNASE1P24855 282 aa11.94□□□□□ -0.5
CLK3-203ENST00000454830 SOX8P57073 446 aa11.94□□□□□ -0.5
CLK3-203ENST00000454830 TSPAN5P62079 268 aa11.94□□□□□ -0.5
CLK3-203ENST00000454830 RIPPLY1Q0D2K3 151 aa11.94□□□□□ -0.5
CLK3-203ENST00000454830 KLK13Q9UKR3 277 aa11.94□□□□□ -0.5
CLK3-203ENST00000454830 ARPC4-TTLL3A0A0A6YYG9 625 aa11.94□□□□□ -0.5
CLK3-203ENST00000454830 LOC390937A0A1W2PQ73 354 aa11.94□□□□□ -0.5
CLK3-203ENST00000454830 SPRY1O43609 319 aaPredicted RBP11.94□□□□□ -0.5
CLK3-203ENST00000454830 ICMTO60725 284 aa11.94□□□□□ -0.5
CLK3-203ENST00000454830 THBS4P35443 961 aa11.94□□□□□ -0.5
CLK3-203ENST00000454830 CDK10Q15131 360 aa11.94□□□□□ -0.5
CLK3-203ENST00000454830 C1QL2Q7Z5L3 287 aa11.94□□□□□ -0.5
CLK3-203ENST00000454830 GCNT2Q8N0V5 402 aa11.94□□□□□ -0.5
CLK3-203ENST00000454830 FAM109AQ8N4B1 249 aa11.94□□□□□ -0.5
CLK3-203ENST00000454830 NTNG2Q96CW9 530 aa11.94□□□□□ -0.5
CLK3-203ENST00000454830 BORCS8Q96FH0 119 aa11.94□□□□□ -0.5
CLK3-203ENST00000454830 ST6GALNAC5Q9BVH7 336 aa11.94□□□□□ -0.5
CLK3-203ENST00000454830 C5orf49A4QMS7 147 aa11.93□□□□□ -0.5
CLK3-203ENST00000454830 CDC14BO60729 498 aa11.93□□□□□ -0.5
CLK3-203ENST00000454830 SIX6O95475 246 aa11.93□□□□□ -0.5
CLK3-203ENST00000454830 RAB6AP20340 208 aa11.93□□□□□ -0.5
CLK3-203ENST00000454830 BLVRBP30043 206 aaPredicted RBP11.93□□□□□ -0.5
CLK3-203ENST00000454830 PTGFRP43088 359 aa11.93□□□□□ -0.5
CLK3-203ENST00000454830 C17orf107Q6ZR85 190 aa11.93□□□□□ -0.5
CLK3-203ENST00000454830 MAFIPQ8WZ33 124 aa11.93□□□□□ -0.5
CLK3-203ENST00000454830 WNT5BQ9H1J7 359 aa11.93□□□□□ -0.5
CLK3-203ENST00000454830 ZNF552Q9H707 407 aaPredicted RBP11.93□□□□□ -0.5
CLK3-203ENST00000454830 SCPEP1Q9HB40 452 aa11.93□□□□□ -0.5
CLK3-203ENST00000454830 A0A0U1RQV5 110 aa11.93□□□□□ -0.5
CLK3-203ENST00000454830 DISC1C4P0D8 188 aa11.93□□□□□ -0.5
CLK3-203ENST00000454830 SYNGR3O43761 229 aa11.93□□□□□ -0.5
CLK3-203ENST00000454830 PMP2P02689 132 aa11.93□□□□□ -0.5
CLK3-203ENST00000454830 IFITM2Q01629 132 aa11.93□□□□□ -0.5
CLK3-203ENST00000454830 HGFACQ04756 655 aa11.93□□□□□ -0.5
CLK3-203ENST00000454830 MOB3CQ70IA8 216 aa11.93□□□□□ -0.5
CLK3-203ENST00000454830 DEDD2Q8WXF8 326 aa11.93□□□□□ -0.5
CLK3-203ENST00000454830 PP6455Q8WZ26 134 aa11.93□□□□□ -0.5
CLK3-203ENST00000454830 SLC6A7Q99884 636 aa11.93□□□□□ -0.5
CLK3-203ENST00000454830 GSTT2P0CG29 244 aa11.93□□□□□ -0.5
CLK3-203ENST00000454830 ACKR3P25106 362 aa11.93□□□□□ -0.5
CLK3-203ENST00000454830 RSU1Q15404 277 aa11.93□□□□□ -0.5
CLK3-203ENST00000454830 RNFT1Q5M7Z0 435 aa11.93□□□□□ -0.5
CLK3-203ENST00000454830 DTX1Q86Y01 620 aa11.93□□□□□ -0.5
CLK3-203ENST00000454830 ARHGAP5-AS1Q96IT6 56 aa11.93□□□□□ -0.5
CLK3-203ENST00000454830 HYLS1Q96M11 299 aa11.93□□□□□ -0.5
CLK3-203ENST00000454830 ZNF701Q9NV72 531 aaPredicted RBP11.93□□□□□ -0.5
CLK3-203ENST00000454830 COL27A1Q8IZC6 1860 aaPredicted RBP11.92□□□□□ -0.5
CLK3-203ENST00000454830 OR6C6A6NF89 314 aa11.92□□□□□ -0.5
CLK3-203ENST00000454830 MGMTP16455 207 aa11.92□□□□□ -0.5
CLK3-203ENST00000454830 SPINK2P20155 84 aa11.92□□□□□ -0.5
CLK3-203ENST00000454830 SNU13P55769 128 aaKnown RBP11.92□□□□□ -0.5
CLK3-203ENST00000454830 PLP2Q04941 152 aa11.92□□□□□ -0.5
CLK3-203ENST00000454830 RIPPLY2Q5TAB7 128 aa11.92□□□□□ -0.5
CLK3-203ENST00000454830 PLCXD3Q63HM9 321 aa11.92□□□□□ -0.5
CLK3-203ENST00000454830 NUFIP2Q7Z417 695 aaKnown RBP11.92□□□□□ -0.5
CLK3-203ENST00000454830 MDS2Q8NDY4 140 aa11.92□□□□□ -0.5
CLK3-203ENST00000454830 CHST6Q9GZX3 395 aa11.92□□□□□ -0.5
CLK3-203ENST00000454830 DMXL1Q9Y485 3027 aa11.92□□□□□ -0.5
CLK3-203ENST00000454830 A0A0A6YYH2 397 aa11.92□□□□□ -0.5
CLK3-203ENST00000454830 A0A1B0GUH1 482 aa11.92□□□□□ -0.5
CLK3-203ENST00000454830 A6NJ64 397 aa11.92□□□□□ -0.5
CLK3-203ENST00000454830 SLC22A20A6NK97 555 aa11.92□□□□□ -0.5
CLK3-203ENST00000454830 LDLRAD4O15165 306 aa11.92□□□□□ -0.5
CLK3-203ENST00000454830 RAG2P55895 527 aa11.92□□□□□ -0.5
CLK3-203ENST00000454830 FOXL2NBQ6ZUU3 175 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms