RNA–Protein interactions for RNA: ENST00000454468.5

SMPD4-213, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 1 (best)

Gene SMPD4, Length 3,586 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-213ENST00000454468 CHRNA10Q9GZZ6 450 aa10.57□□□□□ -0.72
SMPD4-213ENST00000454468 P4HTMQ9NXG6 502 aa10.57□□□□□ -0.72
SMPD4-213ENST00000454468 ESPL1Q14674 2120 aa10.57□□□□□ -0.72
SMPD4-213ENST00000454468 SGCEO43556 437 aa10.57□□□□□ -0.72
SMPD4-213ENST00000454468 RFPL3SP0C7P2 107 aa10.57□□□□□ -0.72
SMPD4-213ENST00000454468 PGA4P0DJD7 388 aa10.57□□□□□ -0.72
SMPD4-213ENST00000454468 PGA3P0DJD8 388 aa10.57□□□□□ -0.72
SMPD4-213ENST00000454468 IL11RAQ14626 422 aa10.57□□□□□ -0.72
SMPD4-213ENST00000454468 ATPAF1Q5TC12 328 aaPredicted RBP10.57□□□□□ -0.72
SMPD4-213ENST00000454468 ZNF813Q6ZN06 617 aa10.57□□□□□ -0.72
SMPD4-213ENST00000454468 CLEC1AQ8NC01 280 aa10.57□□□□□ -0.72
SMPD4-213ENST00000454468 OR2Y1Q8NGV0 311 aa10.57□□□□□ -0.72
SMPD4-213ENST00000454468 OR10R2Q8NGX6 335 aa10.57□□□□□ -0.72
SMPD4-213ENST00000454468 KCNG3Q8TAE7 436 aa10.57□□□□□ -0.72
SMPD4-213ENST00000454468 ABHD3Q8WU67 409 aa10.57□□□□□ -0.72
SMPD4-213ENST00000454468 SLC25A43Q8WUT9 341 aaPredicted RBP10.57□□□□□ -0.72
SMPD4-213ENST00000454468 DCUN1D4Q92564 292 aa10.57□□□□□ -0.72
SMPD4-213ENST00000454468 PHB2Q99623 299 aa10.57□□□□□ -0.72
SMPD4-213ENST00000454468 HES7Q9BYE0 225 aa10.57□□□□□ -0.72
SMPD4-213ENST00000454468 C12orf49Q9H741 205 aa10.57□□□□□ -0.72
SMPD4-213ENST00000454468 CCDC163A0A0D9SF12 145 aa10.57□□□□□ -0.72
SMPD4-213ENST00000454468 TOX3O15405 576 aaPredicted RBP10.57□□□□□ -0.72
SMPD4-213ENST00000454468 IGF2P01344 180 aa10.57□□□□□ -0.72
SMPD4-213ENST00000454468 GIPP09681 153 aaPredicted RBP10.57□□□□□ -0.72
SMPD4-213ENST00000454468 MMP16P51512 607 aa10.57□□□□□ -0.72
SMPD4-213ENST00000454468 CLDN15P56746 228 aa10.57□□□□□ -0.72
SMPD4-213ENST00000454468 PCK2Q16822 640 aa10.57□□□□□ -0.72
SMPD4-213ENST00000454468 CEACAM16Q2WEN9 425 aa10.57□□□□□ -0.72
SMPD4-213ENST00000454468 C6orf201Q7Z4U5 140 aa10.57□□□□□ -0.72
SMPD4-213ENST00000454468 ADAD2Q8NCV1 583 aaKnown RBP10.57□□□□□ -0.72
SMPD4-213ENST00000454468 GPX8Q8TED1 209 aa10.57□□□□□ -0.72
SMPD4-213ENST00000454468 CLDN23Q96B33 292 aa10.57□□□□□ -0.72
SMPD4-213ENST00000454468 BORCS8Q96FH0 119 aa10.57□□□□□ -0.72
SMPD4-213ENST00000454468 OR10A2Q9H208 303 aa10.57□□□□□ -0.72
SMPD4-213ENST00000454468 KCNK7Q9Y2U2 307 aa10.57□□□□□ -0.72
SMPD4-213ENST00000454468 HDGFL3Q9Y3E1 203 aa10.57□□□□□ -0.72
SMPD4-213ENST00000454468 CHCHD2Q9Y6H1 151 aaPredicted RBP10.57□□□□□ -0.72
SMPD4-213ENST00000454468 PRR14LQ5THK1 2151 aa10.57□□□□□ -0.72
SMPD4-213ENST00000454468 A0A1B0GV50 99 aa10.56□□□□□ -0.72
SMPD4-213ENST00000454468 OR5H14A6NHG9 310 aa10.56□□□□□ -0.72
SMPD4-213ENST00000454468 CD1AP06126 327 aa10.56□□□□□ -0.72
SMPD4-213ENST00000454468 UMODP07911 640 aa10.56□□□□□ -0.72
SMPD4-213ENST00000454468 KISS1Q15726 138 aa10.56□□□□□ -0.72
SMPD4-213ENST00000454468 PHYHD1Q5SRE7 291 aa10.56□□□□□ -0.72
SMPD4-213ENST00000454468 MOB3CQ70IA8 216 aa10.56□□□□□ -0.72
SMPD4-213ENST00000454468 TMEM105Q8N8V8 129 aa10.56□□□□□ -0.72
SMPD4-213ENST00000454468 OR9K2Q8NGE7 335 aa10.56□□□□□ -0.72
SMPD4-213ENST00000454468 DYRK2Q92630 601 aa10.56□□□□□ -0.72
SMPD4-213ENST00000454468 SMIM3Q9BZL3 60 aa10.56□□□□□ -0.72
SMPD4-213ENST00000454468 ZNF442Q9H7R0 627 aa10.56□□□□□ -0.72
SMPD4-213ENST00000454468 FAM206AQ9NX38 181 aa10.56□□□□□ -0.72
SMPD4-213ENST00000454468 ANOS1P23352 680 aa10.56□□□□□ -0.72
SMPD4-213ENST00000454468 ACER2Q5QJU3 275 aa10.56□□□□□ -0.72
SMPD4-213ENST00000454468 ELFN2Q5R3F8 820 aa10.56□□□□□ -0.72
SMPD4-213ENST00000454468 C1QL2Q7Z5L3 287 aa10.56□□□□□ -0.72
SMPD4-213ENST00000454468 PPP1R1CQ8WVI7 109 aa10.56□□□□□ -0.72
SMPD4-213ENST00000454468 HDHD3Q9BSH5 251 aaPredicted RBP10.56□□□□□ -0.72
SMPD4-213ENST00000454468 TAS2R3Q9NYW6 316 aa10.56□□□□□ -0.72
SMPD4-213ENST00000454468 EML6Q6ZMW3 1958 aa10.56□□□□□ -0.72
SMPD4-213ENST00000454468 PCNX2A6NKB5 2137 aa10.56□□□□□ -0.72
SMPD4-213ENST00000454468 IGHV1-45A0A0A0MS14 117 aa10.56□□□□□ -0.72
SMPD4-213ENST00000454468 A0A0B4J2A0 478 aa10.56□□□□□ -0.72
SMPD4-213ENST00000454468 OR7C1O76099 320 aaPredicted RBP10.56□□□□□ -0.72
SMPD4-213ENST00000454468 NR2C1P13056 603 aa10.56□□□□□ -0.72
SMPD4-213ENST00000454468 MGMTP16455 207 aa10.56□□□□□ -0.72
SMPD4-213ENST00000454468 DUSP1P28562 367 aa10.56□□□□□ -0.72
SMPD4-213ENST00000454468 MPLP40238 635 aa10.56□□□□□ -0.72
SMPD4-213ENST00000454468 RRADP55042 308 aa10.56□□□□□ -0.72
SMPD4-213ENST00000454468 C6orf15Q6UXA7 325 aaPredicted RBP10.56□□□□□ -0.72
SMPD4-213ENST00000454468 CMTM3Q96MX0 182 aa10.56□□□□□ -0.72
SMPD4-213ENST00000454468 MFRPQ9BY79 579 aa10.56□□□□□ -0.72
SMPD4-213ENST00000454468 BCL2L14Q9BZR8 327 aa10.56□□□□□ -0.72
SMPD4-213ENST00000454468 SHPKQ9UHJ6 478 aa10.56□□□□□ -0.72
SMPD4-213ENST00000454468 OPN4Q9UHM6 478 aa10.56□□□□□ -0.72
SMPD4-213ENST00000454468 EML5Q05BV3 1969 aa10.56□□□□□ -0.72
SMPD4-213ENST00000454468 CCDC187A0A096LP49 1063 aa10.55□□□□□ -0.72
SMPD4-213ENST00000454468 TRAV20A0A0B4J274 112 aa10.55□□□□□ -0.72
SMPD4-213ENST00000454468 MCRIP1C9JLW8 97 aa10.55□□□□□ -0.72
SMPD4-213ENST00000454468 RAB27BO00194 218 aa10.55□□□□□ -0.72
SMPD4-213ENST00000454468 MRPL33O75394 65 aaKnown RBP10.55□□□□□ -0.72
SMPD4-213ENST00000454468 ADAP1O75689 374 aa10.55□□□□□ -0.72
SMPD4-213ENST00000454468 AQP8O94778 261 aa10.55□□□□□ -0.72
SMPD4-213ENST00000454468 FARS2O95363 451 aaKnown RBP10.55□□□□□ -0.72
SMPD4-213ENST00000454468 CASRP41180 1078 aa10.55□□□□□ -0.72
SMPD4-213ENST00000454468 DSCR4P56555 118 aaPredicted RBP10.55□□□□□ -0.72
SMPD4-213ENST00000454468 CTAG1AP78358 180 aa10.55□□□□□ -0.72
SMPD4-213ENST00000454468 UNC119Q13432 240 aa10.55□□□□□ -0.72
SMPD4-213ENST00000454468 SPIN3Q5JUX0 258 aa10.55□□□□□ -0.72
SMPD4-213ENST00000454468 OR6X1Q8NH79 312 aa10.55□□□□□ -0.72
SMPD4-213ENST00000454468 MARC2Q969Z3 335 aa10.55□□□□□ -0.72
SMPD4-213ENST00000454468 CXorf58Q96LI9 332 aa10.55□□□□□ -0.72
SMPD4-213ENST00000454468 VRK1Q99986 396 aaPredicted RBP10.55□□□□□ -0.72
SMPD4-213ENST00000454468 PARPBPQ9NWS1 579 aa10.55□□□□□ -0.72
SMPD4-213ENST00000454468 TCFL5Q9UL49 500 aa10.55□□□□□ -0.72
SMPD4-213ENST00000454468 TECTAO75443 2155 aa10.55□□□□□ -0.72
SMPD4-213ENST00000454468 LY6G6EA0A0G2JKS1 128 aa10.55□□□□□ -0.72
SMPD4-213ENST00000454468 LEUTXA8MZ59 168 aa10.55□□□□□ -0.72
SMPD4-213ENST00000454468 AGPAT2O15120 278 aa10.55□□□□□ -0.72
SMPD4-213ENST00000454468 EIF1BO60739 113 aaKnown RBP10.55□□□□□ -0.72
SMPD4-213ENST00000454468 CBR3O75828 277 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms