RNA–Protein interactions for RNA: ENST00000453453.1

SNX17-204, Transcript of sorting nexin 17, humanhuman

TSL 1 (best)

Gene SNX17, Length 1,638 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-204ENST00000453453 BCO1Q9HAY6 547 aa13.94□□□□□ -0.18
SNX17-204ENST00000453453 TCF7L1Q9HCS4 588 aa13.94□□□□□ -0.18
SNX17-204ENST00000453453 GLRX2Q9NS18 164 aa13.94□□□□□ -0.18
SNX17-204ENST00000453453 KLK11Q9UBX7 282 aa13.94□□□□□ -0.18
SNX17-204ENST00000453453 ZNF107Q9UII5 783 aaPredicted RBP13.94□□□□□ -0.18
SNX17-204ENST00000453453 PURGQ9UJV8 347 aaKnown RBP13.94□□□□□ -0.18
SNX17-204ENST00000453453 CFAP47Q6ZTR5 3102 aa13.94□□□□□ -0.18
SNX17-204ENST00000453453 FXYD6-FXYD2A0A087WZ82 144 aa13.93□□□□□ -0.18
SNX17-204ENST00000453453 IGLV1-36A0A0B4J1U3 117 aa13.93□□□□□ -0.18
SNX17-204ENST00000453453 FAM171A2A8MVW0 826 aa13.93□□□□□ -0.18
SNX17-204ENST00000453453 H3BUI4 141 aa13.93□□□□□ -0.18
SNX17-204ENST00000453453 SULT1C2O00338 296 aa13.93□□□□□ -0.18
SNX17-204ENST00000453453 DCTN6O00399 190 aa13.93□□□□□ -0.18
SNX17-204ENST00000453453 MRPL33O75394 65 aaKnown RBP13.93□□□□□ -0.18
SNX17-204ENST00000453453 WISP2O76076 250 aa13.93□□□□□ -0.18
SNX17-204ENST00000453453 CD8AP01732 235 aa13.93□□□□□ -0.18
SNX17-204ENST00000453453 ABOP16442 354 aa13.93□□□□□ -0.18
SNX17-204ENST00000453453 DCTDP32321 178 aa13.93□□□□□ -0.18
SNX17-204ENST00000453453 PTGER4P35408 488 aa13.93□□□□□ -0.18
SNX17-204ENST00000453453 HOXA1P49639 335 aaPredicted RBP13.93□□□□□ -0.18
SNX17-204ENST00000453453 FMODQ06828 376 aa13.93□□□□□ -0.18
SNX17-204ENST00000453453 ZNF585AQ6P3V2 769 aa13.93□□□□□ -0.18
SNX17-204ENST00000453453 MOB3CQ70IA8 216 aa13.93□□□□□ -0.18
SNX17-204ENST00000453453 TMEM123Q8N131 208 aa13.93□□□□□ -0.18
SNX17-204ENST00000453453 GPR137CQ8N3F9 429 aa13.93□□□□□ -0.18
SNX17-204ENST00000453453 RFLNBQ8N5W9 214 aa13.93□□□□□ -0.18
SNX17-204ENST00000453453 TMEM54Q969K7 222 aa13.93□□□□□ -0.18
SNX17-204ENST00000453453 MARC2Q969Z3 335 aa13.93□□□□□ -0.18
SNX17-204ENST00000453453 ZNF775Q96BV0 537 aaPredicted RBP13.93□□□□□ -0.18
SNX17-204ENST00000453453 C1QTNF6Q9BXI9 259 aa13.93□□□□□ -0.18
SNX17-204ENST00000453453 MFFQ9GZY8 342 aa13.93□□□□□ -0.18
SNX17-204ENST00000453453 FXYD6Q9H0Q3 95 aa13.93□□□□□ -0.18
SNX17-204ENST00000453453 CLCF1Q9UBD9 225 aa13.93□□□□□ -0.18
SNX17-204ENST00000453453 GPR160Q9UJ42 338 aa13.93□□□□□ -0.18
SNX17-204ENST00000453453 FBXO9Q9UK97 447 aaPredicted RBP13.93□□□□□ -0.18
SNX17-204ENST00000453453 COPS3Q9UNS2 423 aa13.93□□□□□ -0.18
SNX17-204ENST00000453453 A0A1W2PPK0 400 aa13.93□□□□□ -0.18
SNX17-204ENST00000453453 FIGNL2A6NMB9 653 aa13.93□□□□□ -0.18
SNX17-204ENST00000453453 NUDT19A8MXV4 375 aa13.93□□□□□ -0.18
SNX17-204ENST00000453453 WDR1O75083 606 aa13.93□□□□□ -0.18
SNX17-204ENST00000453453 OR2F2O95006 317 aa13.93□□□□□ -0.18
SNX17-204ENST00000453453 QDPRP09417 244 aa13.93□□□□□ -0.18
SNX17-204ENST00000453453 SLC25A4P12235 298 aa13.93□□□□□ -0.18
SNX17-204ENST00000453453 GUCA1AP43080 201 aaPredicted RBP13.93□□□□□ -0.18
SNX17-204ENST00000453453 H2BFSP57053 126 aa13.93□□□□□ -0.18
SNX17-204ENST00000453453 OR2F1Q13607 317 aa13.93□□□□□ -0.18
SNX17-204ENST00000453453 HIST3H3Q16695 136 aa13.93□□□□□ -0.18
SNX17-204ENST00000453453 LINC01590Q5TEZ4 76 aa13.93□□□□□ -0.18
SNX17-204ENST00000453453 OR2A2Q6IF42 318 aa13.93□□□□□ -0.18
SNX17-204ENST00000453453 MTFR2Q6P444 385 aa13.93□□□□□ -0.18
SNX17-204ENST00000453453 STAC2Q6ZMT1 411 aa13.93□□□□□ -0.18
SNX17-204ENST00000453453 FAM220AQ7Z4H9 259 aa13.93□□□□□ -0.18
SNX17-204ENST00000453453 ADGRE4PQ86SQ3 457 aa13.93□□□□□ -0.18
SNX17-204ENST00000453453 LRRTM1Q86UE6 522 aa13.93□□□□□ -0.18
SNX17-204ENST00000453453 WDFY1Q8IWB7 410 aa13.93□□□□□ -0.18
SNX17-204ENST00000453453 SNRNP40Q96DI7 357 aaKnown RBP13.93□□□□□ -0.18
SNX17-204ENST00000453453 GMPPAQ96IJ6 420 aaPredicted RBP13.93□□□□□ -0.18
SNX17-204ENST00000453453 INTS14Q96SY0 518 aa13.93□□□□□ -0.18
SNX17-204ENST00000453453 PIGMQ9H3S5 423 aa13.93□□□□□ -0.18
SNX17-204ENST00000453453 CALHM2Q9HA72 323 aa13.93□□□□□ -0.18
SNX17-204ENST00000453453 ATPIF1Q9UII2 106 aa13.93□□□□□ -0.18
SNX17-204ENST00000453453 COA3Q9Y2R0 106 aaPredicted RBP13.93□□□□□ -0.18
SNX17-204ENST00000453453 TRBV5-7A0A0A0MS05 114 aa13.92□□□□□ -0.18
SNX17-204ENST00000453453 RAB19A4D1S5 217 aa13.92□□□□□ -0.18
SNX17-204ENST00000453453 NAA10P41227 235 aaPredicted RBP13.92□□□□□ -0.18
SNX17-204ENST00000453453 ZNF84P51523 738 aa13.92□□□□□ -0.18
SNX17-204ENST00000453453 TDGF1P3P51864 188 aa13.92□□□□□ -0.18
SNX17-204ENST00000453453 ACSF3Q4G176 576 aaPredicted RBP13.92□□□□□ -0.18
SNX17-204ENST00000453453 CLVS2Q5SYC1 327 aa13.92□□□□□ -0.18
SNX17-204ENST00000453453 OR7E24Q6IFN5 339 aa13.92□□□□□ -0.18
SNX17-204ENST00000453453 ANKRD16Q6P6B7 361 aa13.92□□□□□ -0.18
SNX17-204ENST00000453453 SLC25A47Q6Q0C1 308 aa13.92□□□□□ -0.18
SNX17-204ENST00000453453 GFRALQ6UXV0 394 aa13.92□□□□□ -0.18
SNX17-204ENST00000453453 SLC16A9Q7RTY1 509 aa13.92□□□□□ -0.18
SNX17-204ENST00000453453 TUSC5Q8IXB3 177 aa13.92□□□□□ -0.18
SNX17-204ENST00000453453 C20orf196Q8IYI0 205 aa13.92□□□□□ -0.18
SNX17-204ENST00000453453 KCNRGQ8N5I3 272 aa13.92□□□□□ -0.18
SNX17-204ENST00000453453 OR10H5Q8NGA6 315 aa13.92□□□□□ -0.18
SNX17-204ENST00000453453 OR4C16Q8NGL9 310 aa13.92□□□□□ -0.18
SNX17-204ENST00000453453 FAM57AQ8TBR7 257 aa13.92□□□□□ -0.18
SNX17-204ENST00000453453 ZNRF4Q8WWF5 429 aa13.92□□□□□ -0.18
SNX17-204ENST00000453453 ST8SIA2Q92186 375 aa13.92□□□□□ -0.18
SNX17-204ENST00000453453 RGP1Q92546 391 aaPredicted RBP13.92□□□□□ -0.18
SNX17-204ENST00000453453 WNT2BQ93097 391 aa13.92□□□□□ -0.18
SNX17-204ENST00000453453 MCHR2Q969V1 340 aa13.92□□□□□ -0.18
SNX17-204ENST00000453453 PDCD1LG2Q9BQ51 273 aa13.92□□□□□ -0.18
SNX17-204ENST00000453453 ULBP2Q9BZM5 246 aa13.92□□□□□ -0.18
SNX17-204ENST00000453453 MS4A7Q9GZW8 240 aaPredicted RBP13.92□□□□□ -0.18
SNX17-204ENST00000453453 STEAP1Q9UHE8 339 aa13.92□□□□□ -0.18
SNX17-204ENST00000453453 ALPK2Q86TB3 2170 aa13.92□□□□□ -0.18
SNX17-204ENST00000453453 GTF3C1Q12789 2109 aa13.92□□□□□ -0.18
SNX17-204ENST00000453453 PIEZO2Q9H5I5 2752 aa13.92□□□□□ -0.18
SNX17-204ENST00000453453 TVP23AA6NH52 213 aa13.91□□□□□ -0.18
SNX17-204ENST00000453453 GOSR2O14653 212 aa13.91□□□□□ -0.18
SNX17-204ENST00000453453 ZNF823P16415 610 aa13.91□□□□□ -0.18
SNX17-204ENST00000453453 ACTBP60709 375 aa13.91□□□□□ -0.18
SNX17-204ENST00000453453 ACTG1P63261 375 aa13.91□□□□□ -0.18
SNX17-204ENST00000453453 RBPJQ06330 500 aa13.91□□□□□ -0.18
SNX17-204ENST00000453453 LIN54Q6MZP7 749 aa13.91□□□□□ -0.18
SNX17-204ENST00000453453 PLXDC2Q6UX71 529 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms