RNA–Protein interactions for RNA: ENST00000452182.1

SCN9A-204, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

TSL 1 (best)

Gene SCN9A, Length 1,618 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-204ENST00000452182 DIRC2Q96SL1 478 aa9.88□□□□□ -0.83
SCN9A-204ENST00000452182 ZNF275Q9NSD4 429 aaPredicted RBP9.88□□□□□ -0.83
SCN9A-204ENST00000452182 ZDHHC8Q9ULC8 765 aa9.88□□□□□ -0.83
SCN9A-204ENST00000452182 NOP16Q9Y3C1 178 aaKnown RBP9.88□□□□□ -0.83
SCN9A-204ENST00000452182 PMF1-BGLAPU3KQ54 211 aa9.88□□□□□ -0.83
SCN9A-204ENST00000452182 ARFGEF3Q5TH69 2177 aa9.88□□□□□ -0.83
SCN9A-204ENST00000452182 BAHCC1Q9P281 2608 aa9.87□□□□□ -0.83
SCN9A-204ENST00000452182 HECTD1Q9ULT8 2610 aa9.87□□□□□ -0.83
SCN9A-204ENST00000452182 APCP25054 2843 aa9.87□□□□□ -0.83
SCN9A-204ENST00000452182 TRBV5-5A0A0J9YX44 114 aa9.87□□□□□ -0.83
SCN9A-204ENST00000452182 ANKRD30BLA7E2S9 258 aa9.87□□□□□ -0.83
SCN9A-204ENST00000452182 C17orf100A8MU93 164 aa9.87□□□□□ -0.83
SCN9A-204ENST00000452182 H7C417 338 aa9.87□□□□□ -0.83
SCN9A-204ENST00000452182 GMDSO60547 372 aa9.87□□□□□ -0.83
SCN9A-204ENST00000452182 INMTO95050 263 aa9.87□□□□□ -0.83
SCN9A-204ENST00000452182 PSMA1P25786 263 aaKnown RBP9.87□□□□□ -0.83
SCN9A-204ENST00000452182 TRAM1Q15629 374 aa9.87□□□□□ -0.83
SCN9A-204ENST00000452182 NEDD8Q15843 81 aa9.87□□□□□ -0.83
SCN9A-204ENST00000452182 TMEM42Q69YG0 159 aa9.87□□□□□ -0.83
SCN9A-204ENST00000452182 Q6ZR03 302 aa9.87□□□□□ -0.83
SCN9A-204ENST00000452182 OR5AS1Q8N127 324 aa9.87□□□□□ -0.83
SCN9A-204ENST00000452182 BHLHE23Q8NDY6 225 aa9.87□□□□□ -0.83
SCN9A-204ENST00000452182 OR51A4Q8NGJ6 313 aa9.87□□□□□ -0.83
SCN9A-204ENST00000452182 OR10AC1Q8NH08 325 aa9.87□□□□□ -0.83
SCN9A-204ENST00000452182 THRSPQ92748 146 aa9.87□□□□□ -0.83
SCN9A-204ENST00000452182 PIGTQ969N2 578 aa9.87□□□□□ -0.83
SCN9A-204ENST00000452182 MRPS26Q9BYN8 205 aaKnown RBP9.87□□□□□ -0.83
SCN9A-204ENST00000452182 ABCB9Q9NP78 766 aa9.87□□□□□ -0.83
SCN9A-204ENST00000452182 DYNLRB1Q9NP97 96 aa9.87□□□□□ -0.83
SCN9A-204ENST00000452182 TMEM100Q9NV29 134 aa9.87□□□□□ -0.83
SCN9A-204ENST00000452182 NKIRAS2Q9NYR9 191 aa9.87□□□□□ -0.83
SCN9A-204ENST00000452182 ENPP5Q9UJA9 477 aa9.87□□□□□ -0.83
SCN9A-204ENST00000452182 PIGLQ9Y2B2 252 aa9.87□□□□□ -0.83
SCN9A-204ENST00000452182 MPC1Q9Y5U8 109 aa9.87□□□□□ -0.83
SCN9A-204ENST00000452182 UNC79Q9P2D8 2635 aa9.87□□□□□ -0.83
SCN9A-204ENST00000452182 PNMA8CA0A1B0GUJ8 204 aa9.86□□□□□ -0.83
SCN9A-204ENST00000452182 ZSCAN5BA6NJL1 495 aa9.86□□□□□ -0.83
SCN9A-204ENST00000452182 CCRL2O00421 344 aa9.86□□□□□ -0.83
SCN9A-204ENST00000452182 SC5DO75845 299 aa9.86□□□□□ -0.83
SCN9A-204ENST00000452182 RAF1P04049 648 aa9.86□□□□□ -0.83
SCN9A-204ENST00000452182 PSMB9P28065 219 aa9.86□□□□□ -0.83
SCN9A-204ENST00000452182 ALDH3B1P43353 468 aa9.86□□□□□ -0.83
SCN9A-204ENST00000452182 ZNF81P51508 661 aa9.86□□□□□ -0.83
SCN9A-204ENST00000452182 SSX1Q16384 188 aa9.86□□□□□ -0.83
SCN9A-204ENST00000452182 TSTQ16762 297 aaKnown RBP9.86□□□□□ -0.83
SCN9A-204ENST00000452182 PCGF3Q3KNV8 242 aa9.86□□□□□ -0.83
SCN9A-204ENST00000452182 Q499Y3 187 aa9.86□□□□□ -0.83
SCN9A-204ENST00000452182 PARP16Q8N5Y8 322 aa9.86□□□□□ -0.83
SCN9A-204ENST00000452182 OR13C3Q8NGS6 347 aa9.86□□□□□ -0.83
SCN9A-204ENST00000452182 PP6455Q8WZ26 134 aa9.86□□□□□ -0.83
SCN9A-204ENST00000452182 CCL19Q99731 98 aa9.86□□□□□ -0.83
SCN9A-204ENST00000452182 LIME1Q9H400 295 aa9.86□□□□□ -0.83
SCN9A-204ENST00000452182 CXorf56Q9H5V9 222 aa9.86□□□□□ -0.83
SCN9A-204ENST00000452182 PLEKHA1Q9HB21 404 aa9.86□□□□□ -0.83
SCN9A-204ENST00000452182 MSL2Q9HCI7 577 aa9.86□□□□□ -0.83
SCN9A-204ENST00000452182 ASH1LQ9NR48 2969 aaKnown RBP9.86□□□□□ -0.83
SCN9A-204ENST00000452182 NDUFB11Q9NX14 153 aa9.86□□□□□ -0.83
SCN9A-204ENST00000452182 DHDHQ9UQ10 334 aa9.86□□□□□ -0.83
SCN9A-204ENST00000452182 SF3B6Q9Y3B4 125 aaKnown RBP9.86□□□□□ -0.83
SCN9A-204ENST00000452182 RHBDD3Q9Y3P4 386 aa9.86□□□□□ -0.83
SCN9A-204ENST00000452182 SERPINA3P01011 423 aa9.85□□□□□ -0.83
SCN9A-204ENST00000452182 IGHV1-46P01743 117 aa9.85□□□□□ -0.83
SCN9A-204ENST00000452182 CD2P06729 351 aa9.85□□□□□ -0.83
SCN9A-204ENST00000452182 CD55P08174 381 aa9.85□□□□□ -0.83
SCN9A-204ENST00000452182 OCM2P0CE71 109 aa9.85□□□□□ -0.83
SCN9A-204ENST00000452182 NAT2P11245 290 aa9.85□□□□□ -0.83
SCN9A-204ENST00000452182 PAX1P15863 534 aa9.85□□□□□ -0.83
SCN9A-204ENST00000452182 FAHP16930 419 aa9.85□□□□□ -0.83
SCN9A-204ENST00000452182 GABRA5P31644 462 aa9.85□□□□□ -0.83
SCN9A-204ENST00000452182 GP2P55259 537 aaKnown RBP9.85□□□□□ -0.83
SCN9A-204ENST00000452182 FAM209AQ5JX71 171 aa9.85□□□□□ -0.83
SCN9A-204ENST00000452182 CLVS2Q5SYC1 327 aa9.85□□□□□ -0.83
SCN9A-204ENST00000452182 UTS2BQ765I0 119 aa9.85□□□□□ -0.83
SCN9A-204ENST00000452182 SPERTQ8NA61 448 aa9.85□□□□□ -0.83
SCN9A-204ENST00000452182 UBASH3BQ8TF42 649 aa9.85□□□□□ -0.83
SCN9A-204ENST00000452182 TSEN15Q8WW01 171 aaKnown RBP9.85□□□□□ -0.83
SCN9A-204ENST00000452182 TECTBQ96PL2 329 aa9.85□□□□□ -0.83
SCN9A-204ENST00000452182 PAPOLGQ9BWT3 736 aaKnown RBP9.85□□□□□ -0.83
SCN9A-204ENST00000452182 CACNG6Q9BXT2 260 aa9.85□□□□□ -0.83
SCN9A-204ENST00000452182 CHST5Q9GZS9 411 aa9.85□□□□□ -0.83
SCN9A-204ENST00000452182 ANKRD61A6NGH8 418 aa9.85□□□□□ -0.83
SCN9A-204ENST00000452182 ZNF879B4DU55 563 aa9.85□□□□□ -0.83
SCN9A-204ENST00000452182 MLNRO43193 412 aa9.85□□□□□ -0.83
SCN9A-204ENST00000452182 GATBO75879 557 aaKnown RBP9.85□□□□□ -0.83
SCN9A-204ENST00000452182 ALX3O95076 343 aa9.85□□□□□ -0.83
SCN9A-204ENST00000452182 HLA-DPB1P04440 258 aa9.85□□□□□ -0.83
SCN9A-204ENST00000452182 GALP22466 123 aa9.85□□□□□ -0.83
SCN9A-204ENST00000452182 CA6P23280 308 aa9.85□□□□□ -0.83
SCN9A-204ENST00000452182 MAPK3P27361 379 aaPredicted RBP9.85□□□□□ -0.83
SCN9A-204ENST00000452182 GNALP38405 381 aa9.85□□□□□ -0.83
SCN9A-204ENST00000452182 CD200R1LQ6Q8B3 271 aa9.85□□□□□ -0.83
SCN9A-204ENST00000452182 UNQ9370/PRO34162Q6UXP9 181 aa9.85□□□□□ -0.83
SCN9A-204ENST00000452182 SERPINA12Q8IW75 414 aa9.85□□□□□ -0.83
SCN9A-204ENST00000452182 CELF2-AS1Q8N7Q2 184 aa9.85□□□□□ -0.83
SCN9A-204ENST00000452182 PIGCQ92535 297 aa9.85□□□□□ -0.83
SCN9A-204ENST00000452182 PHYHIPQ92561 330 aa9.85□□□□□ -0.83
SCN9A-204ENST00000452182 NRGNQ92686 78 aa9.85□□□□□ -0.83
SCN9A-204ENST00000452182 NINJ1Q92982 152 aa9.85□□□□□ -0.83
SCN9A-204ENST00000452182 TMEM106AQ96A25 262 aa9.85□□□□□ -0.83
SCN9A-204ENST00000452182 FGGYQ96C11 551 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms