RNA–Protein interactions for RNA: ENST00000449223.3

RPS28-202, Transcript of ribosomal protein S28, humanhuman

TSL 2

Gene RPS28, Length 1,523 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-202ENST00000449223 LYPD6Q86Y78 171 aa16.54■□□□□ 0.24
RPS28-202ENST00000449223 CDH26Q8IXH8 852 aa16.54■□□□□ 0.24
RPS28-202ENST00000449223 NKAIN3Q8N8D7 197 aa16.54■□□□□ 0.24
RPS28-202ENST00000449223 OR1M1Q8NGA1 313 aa16.54■□□□□ 0.24
RPS28-202ENST00000449223 TMEM171Q8WVE6 324 aa16.54■□□□□ 0.24
RPS28-202ENST00000449223 GFI1Q99684 422 aa16.54■□□□□ 0.24
RPS28-202ENST00000449223 BARHL1Q9BZE3 327 aa16.54■□□□□ 0.24
RPS28-202ENST00000449223 TMEM138Q9NPI0 162 aa16.54■□□□□ 0.24
RPS28-202ENST00000449223 KLF2Q9Y5W3 355 aaPredicted RBP16.54■□□□□ 0.24
RPS28-202ENST00000449223 A3GALT2U3KPV4 340 aa16.54■□□□□ 0.24
RPS28-202ENST00000449223 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP16.53■□□□□ 0.24
RPS28-202ENST00000449223 GGT3PA6NGU5 568 aa16.53■□□□□ 0.24
RPS28-202ENST00000449223 RAB3AP20336 220 aa16.53■□□□□ 0.24
RPS28-202ENST00000449223 SOX6P35712 828 aa16.53■□□□□ 0.24
RPS28-202ENST00000449223 RORCP51449 518 aa16.53■□□□□ 0.24
RPS28-202ENST00000449223 MXD1Q05195 221 aa16.53■□□□□ 0.24
RPS28-202ENST00000449223 PSG7Q13046 419 aa16.53■□□□□ 0.24
RPS28-202ENST00000449223 RGS7BPQ6MZT1 257 aaPredicted RBP16.53■□□□□ 0.24
RPS28-202ENST00000449223 OR51A2Q8NGJ7 313 aa16.53■□□□□ 0.24
RPS28-202ENST00000449223 SSC4DQ8WTU2 575 aa16.53■□□□□ 0.24
RPS28-202ENST00000449223 CMBLQ96DG6 245 aa16.53■□□□□ 0.24
RPS28-202ENST00000449223 NXF2Q9GZY0 626 aaKnown RBP16.53■□□□□ 0.24
RPS28-202ENST00000449223 TPK1Q9H3S4 243 aa16.53■□□□□ 0.24
RPS28-202ENST00000449223 ZNF442Q9H7R0 627 aa16.53■□□□□ 0.24
RPS28-202ENST00000449223 MRPL15Q9P015 296 aaKnown RBP16.53■□□□□ 0.24
RPS28-202ENST00000449223 KCNN3Q9UGI6 736 aa16.53■□□□□ 0.24
RPS28-202ENST00000449223 RALYQ9UKM9 306 aaKnown RBP16.53■□□□□ 0.24
RPS28-202ENST00000449223 IGLV3-9A0A075B6K5 115 aa16.52■□□□□ 0.24
RPS28-202ENST00000449223 IGKV1-9A0A0C4DH69 117 aa16.52■□□□□ 0.24
RPS28-202ENST00000449223 CLEC18AA5D8T8 446 aa16.52■□□□□ 0.24
RPS28-202ENST00000449223 A6NIN4 97 aa16.52■□□□□ 0.24
RPS28-202ENST00000449223 NOTOA8MTQ0 251 aa16.52■□□□□ 0.24
RPS28-202ENST00000449223 GMDSO60547 372 aa16.52■□□□□ 0.24
RPS28-202ENST00000449223 ALDOBP05062 364 aa16.52■□□□□ 0.24
RPS28-202ENST00000449223 ERCC1P07992 297 aaPredicted RBP16.52■□□□□ 0.24
RPS28-202ENST00000449223 BDKRB2P30411 391 aa16.52■□□□□ 0.24
RPS28-202ENST00000449223 PRSS12P56730 875 aa16.52■□□□□ 0.24
RPS28-202ENST00000449223 SRSF1Q07955 248 aaKnown RBP eCLIP16.52■□□□□ 0.24
RPS28-202ENST00000449223 SNTB1Q13884 538 aaKnown RBP16.52■□□□□ 0.24
RPS28-202ENST00000449223 DGUOKQ16854 277 aa16.52■□□□□ 0.24
RPS28-202ENST00000449223 SFXN4Q6P4A7 337 aa16.52■□□□□ 0.24
RPS28-202ENST00000449223 CLEC18BQ6UXF7 455 aa16.52■□□□□ 0.24
RPS28-202ENST00000449223 DMRTC2Q8IXT2 367 aaPredicted RBP16.52■□□□□ 0.24
RPS28-202ENST00000449223 OR5AS1Q8N127 324 aa16.52■□□□□ 0.24
RPS28-202ENST00000449223 CLEC18CQ8NCF0 446 aa16.52■□□□□ 0.24
RPS28-202ENST00000449223 OR13C9Q8NGT0 318 aa16.52■□□□□ 0.24
RPS28-202ENST00000449223 PLPPR2Q96GM1 343 aa16.52■□□□□ 0.24
RPS28-202ENST00000449223 A0A1B0GWJ7 208 aa16.51■□□□□ 0.23
RPS28-202ENST00000449223 DEFB108AA8MXU0 73 aa16.51■□□□□ 0.23
RPS28-202ENST00000449223 SIAH2O43255 324 aa16.51■□□□□ 0.23
RPS28-202ENST00000449223 MAS1P04201 325 aa16.51■□□□□ 0.23
RPS28-202ENST00000449223 PRF1P14222 555 aa16.51■□□□□ 0.23
RPS28-202ENST00000449223 LOXP28300 417 aaPredicted RBP16.51■□□□□ 0.23
RPS28-202ENST00000449223 MPV17P39210 176 aa16.51■□□□□ 0.23
RPS28-202ENST00000449223 HNRNPA0Q13151 305 aaKnown RBP16.51■□□□□ 0.23
RPS28-202ENST00000449223 UBE2V2Q15819 145 aa16.51■□□□□ 0.23
RPS28-202ENST00000449223 TMEM255AQ5JRV8 349 aa16.51■□□□□ 0.23
RPS28-202ENST00000449223 OR2T2Q6IF00 324 aa16.51■□□□□ 0.23
RPS28-202ENST00000449223 PIAS4Q8N2W9 510 aaPredicted RBP16.51■□□□□ 0.23
RPS28-202ENST00000449223 SPSB1Q96BD6 273 aa16.51■□□□□ 0.23
RPS28-202ENST00000449223 TMEM204Q9BSN7 226 aa16.51■□□□□ 0.23
RPS28-202ENST00000449223 PLEKHB1Q9UF11 243 aaPredicted RBP16.51■□□□□ 0.23
RPS28-202ENST00000449223 AK6Q9Y3D8 172 aaKnown RBP16.51■□□□□ 0.23
RPS28-202ENST00000449223 RHBDD3Q9Y3P4 386 aa16.51■□□□□ 0.23
RPS28-202ENST00000449223 PMF1-BGLAPU3KQ54 211 aa16.51■□□□□ 0.23
RPS28-202ENST00000449223 V9GY05 133 aa16.51■□□□□ 0.23
RPS28-202ENST00000449223 ANXA2P2A6NMY6 339 aa16.5■□□□□ 0.23
RPS28-202ENST00000449223 SHISA9B4DS77 424 aa16.5■□□□□ 0.23
RPS28-202ENST00000449223 AIPO00170 330 aa16.5■□□□□ 0.23
RPS28-202ENST00000449223 NRASP01111 189 aa16.5■□□□□ 0.23
RPS28-202ENST00000449223 IGHV3-13P01766 116 aa16.5■□□□□ 0.23
RPS28-202ENST00000449223 RNF224P0DH78 156 aa16.5■□□□□ 0.23
RPS28-202ENST00000449223 ATF1P18846 271 aa16.5■□□□□ 0.23
RPS28-202ENST00000449223 GCH1P30793 250 aa16.5■□□□□ 0.23
RPS28-202ENST00000449223 KIR2DL3P43628 341 aa16.5■□□□□ 0.23
RPS28-202ENST00000449223 OR10A3P58181 314 aa16.5■□□□□ 0.23
RPS28-202ENST00000449223 DYNC1I2Q13409 638 aaKnown RBP16.5■□□□□ 0.23
RPS28-202ENST00000449223 MSMPQ1L6U9 139 aa16.5■□□□□ 0.23
RPS28-202ENST00000449223 SLC22A25Q6T423 547 aa16.5■□□□□ 0.23
RPS28-202ENST00000449223 FAM222BQ8WU58 562 aa16.5■□□□□ 0.23
RPS28-202ENST00000449223 FOXRED1Q96CU9 486 aaPredicted RBP16.5■□□□□ 0.23
RPS28-202ENST00000449223 KCTD12Q96CX2 325 aaKnown RBP16.5■□□□□ 0.23
RPS28-202ENST00000449223 CA10Q9NS85 328 aa16.5■□□□□ 0.23
RPS28-202ENST00000449223 CRIM1Q9NZV1 1036 aa16.5■□□□□ 0.23
RPS28-202ENST00000449223 PURGQ9UJV8 347 aaKnown RBP16.5■□□□□ 0.23
RPS28-202ENST00000449223 MPC1Q9Y5U8 109 aa16.5■□□□□ 0.23
RPS28-202ENST00000449223 A0A075B6Q4 140 aa16.5■□□□□ 0.23
RPS28-202ENST00000449223 IFITM5A6NNB3 132 aa16.5■□□□□ 0.23
RPS28-202ENST00000449223 C19orf84I3L1E1 186 aa16.5■□□□□ 0.23
RPS28-202ENST00000449223 NCR1O76036 304 aa16.5■□□□□ 0.23
RPS28-202ENST00000449223 CD3EP07766 207 aa16.5■□□□□ 0.23
RPS28-202ENST00000449223 CNN3Q15417 329 aaKnown RBP16.5■□□□□ 0.23
RPS28-202ENST00000449223 GLT8D1Q68CQ7 371 aa16.5■□□□□ 0.23
RPS28-202ENST00000449223 FAM166AQ6J272 317 aa16.5■□□□□ 0.23
RPS28-202ENST00000449223 DNAAF1Q8NEP3 725 aa16.5■□□□□ 0.23
RPS28-202ENST00000449223 UQCC2Q9BRT2 126 aa16.5■□□□□ 0.23
RPS28-202ENST00000449223 METTL17Q9H7H0 456 aaPredicted RBP16.5■□□□□ 0.23
RPS28-202ENST00000449223 ABCB9Q9NP78 766 aa16.5■□□□□ 0.23
RPS28-202ENST00000449223 PLA2G2AP14555 144 aa16.49■□□□□ 0.23
RPS28-202ENST00000449223 CAV3P56539 151 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms