RNA–Protein interactions for RNA: ENST00000448905.6

HMGB3-204, Transcript of high mobility group box 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HMGB3, Length 812 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3-204ENST00000448905 SLC16A9Q7RTY1 509 aa10.94□□□□□ -0.66
HMGB3-204ENST00000448905 ZNF511Q8NB15 262 aa10.94□□□□□ -0.66
HMGB3-204ENST00000448905 SLC37A3Q8NCC5 494 aa10.94□□□□□ -0.66
HMGB3-204ENST00000448905 SGK3Q96BR1 496 aa10.94□□□□□ -0.66
HMGB3-204ENST00000448905 REEP6Q96HR9 211 aa10.94□□□□□ -0.66
HMGB3-204ENST00000448905 HIST1H2AAQ96QV6 131 aa10.94□□□□□ -0.66
HMGB3-204ENST00000448905 DDOQ99489 341 aa10.94□□□□□ -0.66
HMGB3-204ENST00000448905 DNTTIP1Q9H147 329 aa10.94□□□□□ -0.66
HMGB3-204ENST00000448905 OR10A2Q9H208 303 aa10.94□□□□□ -0.66
HMGB3-204ENST00000448905 RGCCQ9H4X1 137 aa10.94□□□□□ -0.66
HMGB3-204ENST00000448905 ABCB9Q9NP78 766 aa10.94□□□□□ -0.66
HMGB3-204ENST00000448905 HAO2Q9NYQ3 351 aa10.94□□□□□ -0.66
HMGB3-204ENST00000448905 MPC1Q9Y5U8 109 aa10.94□□□□□ -0.66
HMGB3-204ENST00000448905 CMYA5Q8N3K9 4069 aa10.94□□□□□ -0.66
HMGB3-204ENST00000448905 SEMG1P04279 462 aa10.93□□□□□ -0.66
HMGB3-204ENST00000448905 HSD17B1P14061 328 aa10.93□□□□□ -0.66
HMGB3-204ENST00000448905 TGM4P49221 684 aa10.93□□□□□ -0.66
HMGB3-204ENST00000448905 CX3CR1P49238 355 aa10.93□□□□□ -0.66
HMGB3-204ENST00000448905 UBE2E1P51965 193 aa10.93□□□□□ -0.66
HMGB3-204ENST00000448905 SLC25A1P53007 311 aa10.93□□□□□ -0.66
HMGB3-204ENST00000448905 ACSM1Q08AH1 577 aa10.93□□□□□ -0.66
HMGB3-204ENST00000448905 EIF2B1Q14232 305 aaKnown RBP10.93□□□□□ -0.66
HMGB3-204ENST00000448905 C11orf88Q6PI97 169 aa10.93□□□□□ -0.66
HMGB3-204ENST00000448905 WDR82Q6UXN9 313 aa10.93□□□□□ -0.66
HMGB3-204ENST00000448905 Q6ZTK2 550 aa10.93□□□□□ -0.66
HMGB3-204ENST00000448905 C11orf53Q8IXP5 236 aa10.93□□□□□ -0.66
HMGB3-204ENST00000448905 OR2T33Q8NG76 320 aa10.93□□□□□ -0.66
HMGB3-204ENST00000448905 OR6K6Q8NGW6 343 aa10.93□□□□□ -0.66
HMGB3-204ENST00000448905 H1FXQ92522 213 aaKnown RBP10.93□□□□□ -0.66
HMGB3-204ENST00000448905 ELAC2Q9BQ52 826 aaKnown RBP10.93□□□□□ -0.66
HMGB3-204ENST00000448905 DCTN5Q9BTE1 182 aa10.93□□□□□ -0.66
HMGB3-204ENST00000448905 RTL8AQ9BWD3 113 aa10.93□□□□□ -0.66
HMGB3-204ENST00000448905 PAPOLGQ9BWT3 736 aaKnown RBP10.93□□□□□ -0.66
HMGB3-204ENST00000448905 TSSK6Q9BXA6 273 aa10.93□□□□□ -0.66
HMGB3-204ENST00000448905 SIRT7Q9NRC8 400 aa10.93□□□□□ -0.66
HMGB3-204ENST00000448905 TBC1D23Q9NUY8 699 aa10.93□□□□□ -0.66
HMGB3-204ENST00000448905 COMMD3-BMI1R4GMX3 469 aa10.93□□□□□ -0.66
HMGB3-204ENST00000448905 DHRS12A0PJE2 317 aa10.92□□□□□ -0.66
HMGB3-204ENST00000448905 MEIOCA2RUB1 952 aa10.92□□□□□ -0.66
HMGB3-204ENST00000448905 NKX6-3A6NJ46 265 aa10.92□□□□□ -0.66
HMGB3-204ENST00000448905 RIIAD1A6NNX1 92 aa10.92□□□□□ -0.66
HMGB3-204ENST00000448905 CCNB2O95067 398 aa10.92□□□□□ -0.66
HMGB3-204ENST00000448905 GASTP01350 101 aa10.92□□□□□ -0.66
HMGB3-204ENST00000448905 GABRA5P31644 462 aa10.92□□□□□ -0.66
HMGB3-204ENST00000448905 GSK3AP49840 483 aa10.92□□□□□ -0.66
HMGB3-204ENST00000448905 SPATS1Q496A3 300 aa10.92□□□□□ -0.66
HMGB3-204ENST00000448905 SLC35E4Q6ICL7 350 aa10.92□□□□□ -0.66
HMGB3-204ENST00000448905 KCTD8Q6ZWB6 473 aa10.92□□□□□ -0.66
HMGB3-204ENST00000448905 FAM57BQ71RH2 274 aa10.92□□□□□ -0.66
HMGB3-204ENST00000448905 SHFQ7M4L6 423 aa10.92□□□□□ -0.66
HMGB3-204ENST00000448905 TIGD4Q8IY51 512 aa10.92□□□□□ -0.66
HMGB3-204ENST00000448905 PAPD5Q8NDF8 572 aaKnown RBP10.92□□□□□ -0.66
HMGB3-204ENST00000448905 OR5T2Q8NGG2 359 aa10.92□□□□□ -0.66
HMGB3-204ENST00000448905 OR10Z1Q8NGY1 313 aa10.92□□□□□ -0.66
HMGB3-204ENST00000448905 ZNRF4Q8WWF5 429 aa10.92□□□□□ -0.66
HMGB3-204ENST00000448905 PGAM5Q96HS1 289 aa10.92□□□□□ -0.66
HMGB3-204ENST00000448905 CDRT15Q96T59 188 aa10.92□□□□□ -0.66
HMGB3-204ENST00000448905 METTL8Q9H825 291 aaKnown RBP10.92□□□□□ -0.66
HMGB3-204ENST00000448905 ZNRD1Q9P1U0 126 aa10.92□□□□□ -0.66
HMGB3-204ENST00000448905 FBLN5Q9UBX5 448 aa10.92□□□□□ -0.66
HMGB3-204ENST00000448905 SF3B6Q9Y3B4 125 aaKnown RBP10.92□□□□□ -0.66
HMGB3-204ENST00000448905 RHBDD3Q9Y3P4 386 aa10.92□□□□□ -0.66
HMGB3-204ENST00000448905 A0A1W2PQ09 198 aa10.91□□□□□ -0.66
HMGB3-204ENST00000448905 A0A1W2PRD5 423 aa10.91□□□□□ -0.66
HMGB3-204ENST00000448905 A0A1W2PRF3 423 aa10.91□□□□□ -0.66
HMGB3-204ENST00000448905 A0A1W2PRM7 423 aa10.91□□□□□ -0.66
HMGB3-204ENST00000448905 TMEM210A6NLX4 147 aa10.91□□□□□ -0.66
HMGB3-204ENST00000448905 RNASEK-C17orf49H0YIS7 233 aa10.91□□□□□ -0.66
HMGB3-204ENST00000448905 M0R1W7 72 aa10.91□□□□□ -0.66
HMGB3-204ENST00000448905 ACOT8O14734 319 aa10.91□□□□□ -0.66
HMGB3-204ENST00000448905 H2BFMP0C1H6 154 aa10.91□□□□□ -0.66
HMGB3-204ENST00000448905 NDUFB7P17568 137 aa10.91□□□□□ -0.66
HMGB3-204ENST00000448905 SPI1P17947 270 aa10.91□□□□□ -0.66
HMGB3-204ENST00000448905 EGR3Q06889 387 aa10.91□□□□□ -0.66
HMGB3-204ENST00000448905 CRMP1Q14194 572 aa10.91□□□□□ -0.66
HMGB3-204ENST00000448905 GFOD2Q3B7J2 385 aa10.91□□□□□ -0.66
HMGB3-204ENST00000448905 FAM216BQ8N7L0 139 aa10.91□□□□□ -0.66
HMGB3-204ENST00000448905 OR5D13Q8NGL4 314 aa10.91□□□□□ -0.66
HMGB3-204ENST00000448905 C8orf46Q8TAG6 207 aa10.91□□□□□ -0.66
HMGB3-204ENST00000448905 OTULINQ96BN8 352 aa10.91□□□□□ -0.66
HMGB3-204ENST00000448905 RNF170Q96K19 258 aa10.91□□□□□ -0.66
HMGB3-204ENST00000448905 INTS14Q96SY0 518 aa10.91□□□□□ -0.66
HMGB3-204ENST00000448905 MYLK2Q9H1R3 596 aa10.91□□□□□ -0.66
HMGB3-204ENST00000448905 PPA2Q9H2U2 334 aa10.91□□□□□ -0.66
HMGB3-204ENST00000448905 RAB18Q9NP72 206 aa10.91□□□□□ -0.66
HMGB3-204ENST00000448905 NDE1Q9NXR1 346 aa10.91□□□□□ -0.66
HMGB3-204ENST00000448905 SLC25A10Q9UBX3 287 aaPredicted RBP10.91□□□□□ -0.66
HMGB3-204ENST00000448905 ZNF391Q9UJN7 358 aa10.91□□□□□ -0.66
HMGB3-204ENST00000448905 A0A1W2PPH5 198 aa10.9□□□□□ -0.66
HMGB3-204ENST00000448905 H0YAE9 185 aa10.9□□□□□ -0.66
HMGB3-204ENST00000448905 ARPC2O15144 300 aa10.9□□□□□ -0.66
HMGB3-204ENST00000448905 GYPBP06028 91 aa10.9□□□□□ -0.66
HMGB3-204ENST00000448905 ZNF3P17036 446 aa10.9□□□□□ -0.66
HMGB3-204ENST00000448905 GSTT1P30711 240 aa10.9□□□□□ -0.66
HMGB3-204ENST00000448905 SAA4P35542 130 aa10.9□□□□□ -0.66
HMGB3-204ENST00000448905 MSX2P35548 267 aaPredicted RBP10.9□□□□□ -0.66
HMGB3-204ENST00000448905 GMFBP60983 142 aa10.9□□□□□ -0.66
HMGB3-204ENST00000448905 CSNK2BP67870 215 aa10.9□□□□□ -0.66
HMGB3-204ENST00000448905 HERPUD1Q15011 391 aa10.9□□□□□ -0.66
HMGB3-204ENST00000448905 FBLN7Q53RD9 439 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms