RNA–Protein interactions for RNA: ENST00000447873.5

SGCE-207, Transcript of sarcoglycan epsilon, humanhuman

TSL 1 (best) BASIC

Gene SGCE, Length 1,597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-207ENST00000447873 PPP3R1P63098 170 aa16.75■□□□□ 0.27
SGCE-207ENST00000447873 MXD1Q05195 221 aa16.75■□□□□ 0.27
SGCE-207ENST00000447873 CHST5Q9GZS9 411 aa16.75■□□□□ 0.27
SGCE-207ENST00000447873 TPK1Q9H3S4 243 aa16.75■□□□□ 0.27
SGCE-207ENST00000447873 KCNN3Q9UGI6 736 aa16.75■□□□□ 0.27
SGCE-207ENST00000447873 DUSP13Q9UII6 198 aa16.75■□□□□ 0.27
SGCE-207ENST00000447873 CLEC18AA5D8T8 446 aa16.74■□□□□ 0.27
SGCE-207ENST00000447873 ANKRD30BLA7E2S9 258 aa16.74■□□□□ 0.27
SGCE-207ENST00000447873 IL1AP01583 271 aa16.74■□□□□ 0.27
SGCE-207ENST00000447873 ZNF250P15622 560 aa16.74■□□□□ 0.27
SGCE-207ENST00000447873 IGFBP3P17936 291 aaPredicted RBP16.74■□□□□ 0.27
SGCE-207ENST00000447873 CLVS2Q5SYC1 327 aa16.74■□□□□ 0.27
SGCE-207ENST00000447873 CLEC18BQ6UXF7 455 aa16.74■□□□□ 0.27
SGCE-207ENST00000447873 TPRA1Q86W33 373 aa16.74■□□□□ 0.27
SGCE-207ENST00000447873 OR5AS1Q8N127 324 aa16.74■□□□□ 0.27
SGCE-207ENST00000447873 CLEC18CQ8NCF0 446 aa16.74■□□□□ 0.27
SGCE-207ENST00000447873 OR13C9Q8NGT0 318 aa16.74■□□□□ 0.27
SGCE-207ENST00000447873 PIGCQ92535 297 aa16.74■□□□□ 0.27
SGCE-207ENST00000447873 PAPOLGQ9BWT3 736 aaKnown RBP16.74■□□□□ 0.27
SGCE-207ENST00000447873 PURGQ9UJV8 347 aaKnown RBP16.74■□□□□ 0.27
SGCE-207ENST00000447873 RHBDD3Q9Y3P4 386 aa16.74■□□□□ 0.27
SGCE-207ENST00000447873 CMAHPQ9Y471 501 aa16.74■□□□□ 0.27
SGCE-207ENST00000447873 SPTAN1Q13813 2472 aaKnown RBP16.74■□□□□ 0.27
SGCE-207ENST00000447873 A0A1W2PPW3 197 aa16.73■□□□□ 0.27
SGCE-207ENST00000447873 VSTM5A8MXK1 200 aa16.73■□□□□ 0.27
SGCE-207ENST00000447873 PDCD5O14737 125 aa16.73■□□□□ 0.27
SGCE-207ENST00000447873 GMDSO60547 372 aa16.73■□□□□ 0.27
SGCE-207ENST00000447873 OCMP0CE72 109 aaPredicted RBP16.73■□□□□ 0.27
SGCE-207ENST00000447873 RAB3AP20336 220 aa16.73■□□□□ 0.27
SGCE-207ENST00000447873 KITLGP21583 273 aa16.73■□□□□ 0.27
SGCE-207ENST00000447873 RPS19P39019 145 aaKnown RBP16.73■□□□□ 0.27
SGCE-207ENST00000447873 SELENOVP59797 346 aa16.73■□□□□ 0.27
SGCE-207ENST00000447873 UTS2BQ765I0 119 aa16.73■□□□□ 0.27
SGCE-207ENST00000447873 OR1M1Q8NGA1 313 aa16.73■□□□□ 0.27
SGCE-207ENST00000447873 HS3ST6Q96QI5 342 aa16.73■□□□□ 0.27
SGCE-207ENST00000447873 ZNF442Q9H7R0 627 aa16.73■□□□□ 0.27
SGCE-207ENST00000447873 IQCF6A8MYZ5 107 aa16.72■□□□□ 0.27
SGCE-207ENST00000447873 SULT1B1O43704 296 aa16.72■□□□□ 0.27
SGCE-207ENST00000447873 TIMM8AO60220 97 aaPredicted RBP16.72■□□□□ 0.27
SGCE-207ENST00000447873 PLAUP00749 431 aa16.72■□□□□ 0.27
SGCE-207ENST00000447873 CST4P01036 141 aa16.72■□□□□ 0.27
SGCE-207ENST00000447873 NRASP01111 189 aa16.72■□□□□ 0.27
SGCE-207ENST00000447873 CLEC2LP0C7M8 214 aa16.72■□□□□ 0.27
SGCE-207ENST00000447873 KLF3P57682 345 aaPredicted RBP16.72■□□□□ 0.27
SGCE-207ENST00000447873 MSMPQ1L6U9 139 aa16.72■□□□□ 0.27
SGCE-207ENST00000447873 ALKBH6Q3KRA9 238 aa16.72■□□□□ 0.27
SGCE-207ENST00000447873 TMEM42Q69YG0 159 aa16.72■□□□□ 0.27
SGCE-207ENST00000447873 OR51A2Q8NGJ7 313 aa16.72■□□□□ 0.27
SGCE-207ENST00000447873 PIGTQ969N2 578 aa16.72■□□□□ 0.27
SGCE-207ENST00000447873 MRPL24Q96A35 216 aaKnown RBP16.72■□□□□ 0.27
SGCE-207ENST00000447873 DCUN1D5Q9BTE7 237 aa16.72■□□□□ 0.27
SGCE-207ENST00000447873 GPR173Q9NS66 373 aa16.72■□□□□ 0.27
SGCE-207ENST00000447873 MRPL15Q9P015 296 aaKnown RBP16.72■□□□□ 0.27
SGCE-207ENST00000447873 AK6Q9Y3D8 172 aaKnown RBP16.72■□□□□ 0.27
SGCE-207ENST00000447873 TENM4Q6N022 2769 aa16.72■□□□□ 0.27
SGCE-207ENST00000447873 ROS1P08922 2347 aa16.72■□□□□ 0.27
SGCE-207ENST00000447873 SMIM30A4D0T7 59 aa16.72■□□□□ 0.27
SGCE-207ENST00000447873 MEGF11A6BM72 1044 aa16.72■□□□□ 0.27
SGCE-207ENST00000447873 TRIM64BA6NI03 449 aa16.72■□□□□ 0.27
SGCE-207ENST00000447873 ANXA2P2A6NMY6 339 aa16.72■□□□□ 0.27
SGCE-207ENST00000447873 ZNF850A8MQ14 1090 aa16.72■□□□□ 0.27
SGCE-207ENST00000447873 LILRA1O75019 489 aa16.72■□□□□ 0.27
SGCE-207ENST00000447873 RAB3BP20337 219 aa16.72■□□□□ 0.27
SGCE-207ENST00000447873 LOXP28300 417 aaPredicted RBP16.72■□□□□ 0.27
SGCE-207ENST00000447873 BDKRB2P30411 391 aa16.72■□□□□ 0.27
SGCE-207ENST00000447873 PRDX4Q13162 271 aa16.72■□□□□ 0.27
SGCE-207ENST00000447873 UBE2V2Q15819 145 aa16.72■□□□□ 0.27
SGCE-207ENST00000447873 TMEM255AQ5JRV8 349 aa16.72■□□□□ 0.27
SGCE-207ENST00000447873 ZNF529Q6P280 563 aa16.72■□□□□ 0.27
SGCE-207ENST00000447873 LRRTM1Q86UE6 522 aa16.72■□□□□ 0.27
SGCE-207ENST00000447873 LRP11Q86VZ4 500 aa16.72■□□□□ 0.27
SGCE-207ENST00000447873 ACBD4Q8NC06 268 aa16.72■□□□□ 0.27
SGCE-207ENST00000447873 SYT3Q9BQG1 590 aa16.72■□□□□ 0.27
SGCE-207ENST00000447873 TMEM204Q9BSN7 226 aa16.72■□□□□ 0.27
SGCE-207ENST00000447873 TMEM138Q9NPI0 162 aa16.72■□□□□ 0.27
SGCE-207ENST00000447873 GPR160Q9UJ42 338 aa16.72■□□□□ 0.27
SGCE-207ENST00000447873 IGLV3-9A0A075B6K5 115 aa16.71■□□□□ 0.27
SGCE-207ENST00000447873 E7EQL1 145 aa16.71■□□□□ 0.27
SGCE-207ENST00000447873 MAGEB3O15480 346 aa16.71■□□□□ 0.27
SGCE-207ENST00000447873 IGHV3-13P01766 116 aa16.71■□□□□ 0.27
SGCE-207ENST00000447873 ERCC1P07992 297 aaPredicted RBP16.71■□□□□ 0.27
SGCE-207ENST00000447873 OR4A8P0C604 315 aa16.71■□□□□ 0.27
SGCE-207ENST00000447873 ZNF182P17025 639 aaPredicted RBP16.71■□□□□ 0.27
SGCE-207ENST00000447873 ADRA2CP18825 462 aa16.71■□□□□ 0.27
SGCE-207ENST00000447873 ATF1P18846 271 aa16.71■□□□□ 0.27
SGCE-207ENST00000447873 DAZAP2Q15038 168 aaPredicted RBP16.71■□□□□ 0.27
SGCE-207ENST00000447873 CNN3Q15417 329 aaKnown RBP16.71■□□□□ 0.27
SGCE-207ENST00000447873 CNPY1Q3B7I2 92 aa16.71■□□□□ 0.27
SGCE-207ENST00000447873 DMRTC1Q5HYR2 192 aa16.71■□□□□ 0.27
SGCE-207ENST00000447873 CEP78Q5JTW2 689 aa16.71■□□□□ 0.27
SGCE-207ENST00000447873 MOB3CQ70IA8 216 aa16.71■□□□□ 0.27
SGCE-207ENST00000447873 KRT74Q7RTS7 529 aa16.71■□□□□ 0.27
SGCE-207ENST00000447873 OR8G5Q8NG78 346 aa16.71■□□□□ 0.27
SGCE-207ENST00000447873 UBASH3BQ8TF42 649 aa16.71■□□□□ 0.27
SGCE-207ENST00000447873 NEUROG1Q92886 237 aa16.71■□□□□ 0.27
SGCE-207ENST00000447873 TECTBQ96PL2 329 aa16.71■□□□□ 0.27
SGCE-207ENST00000447873 SPOCK3Q9BQ16 436 aa16.71■□□□□ 0.27
SGCE-207ENST00000447873 SLC30A2Q9BRI3 323 aa16.71■□□□□ 0.27
SGCE-207ENST00000447873 MRPL37Q9BZE1 423 aaKnown RBP16.71■□□□□ 0.27
SGCE-207ENST00000447873 COL12A1Q99715 3063 aa16.71■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms