RNA–Protein interactions for RNA: ENST00000445181.5

C9orf3-207, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 873 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-207ENST00000445181 MAP2K3P46734 347 aa20.18■□□□□ 0.82
C9orf3-207ENST00000445181 TP53I3Q53FA7 332 aa20.18■□□□□ 0.82
C9orf3-207ENST00000445181 LIPNQ5VXI9 398 aa20.18■□□□□ 0.82
C9orf3-207ENST00000445181 FAM166AQ6J272 317 aa20.18■□□□□ 0.82
C9orf3-207ENST00000445181 ACBD7Q8N6N7 88 aa20.18■□□□□ 0.82
C9orf3-207ENST00000445181 APH1BQ8WW43 257 aa20.18■□□□□ 0.82
C9orf3-207ENST00000445181 ERGIC1Q969X5 290 aa20.18■□□□□ 0.82
C9orf3-207ENST00000445181 FN3KRPQ9HA64 309 aa20.18■□□□□ 0.82
C9orf3-207ENST00000445181 UBAP1Q9NZ09 502 aa20.18■□□□□ 0.82
C9orf3-207ENST00000445181 KCNS2Q9ULS6 477 aa20.18■□□□□ 0.82
C9orf3-207ENST00000445181 EXOGQ9Y2C4 368 aaKnown RBP20.18■□□□□ 0.82
C9orf3-207ENST00000445181 TMEM178BH3BS89 294 aa20.17■□□□□ 0.82
C9orf3-207ENST00000445181 J3QRE1 110 aa20.17■□□□□ 0.82
C9orf3-207ENST00000445181 FADS2O95864 444 aaKnown RBP20.17■□□□□ 0.82
C9orf3-207ENST00000445181 TTRP02766 147 aa20.17■□□□□ 0.82
C9orf3-207ENST00000445181 GRPP07492 148 aa20.17■□□□□ 0.82
C9orf3-207ENST00000445181 FAM157CP0CG43 387 aa20.17■□□□□ 0.82
C9orf3-207ENST00000445181 BTG1P62324 171 aa20.17■□□□□ 0.82
C9orf3-207ENST00000445181 ZNF684Q5T5D7 378 aa20.17■□□□□ 0.82
C9orf3-207ENST00000445181 C1orf87Q8N0U7 546 aa20.17■□□□□ 0.82
C9orf3-207ENST00000445181 LINC01356Q8N9X3 169 aa20.17■□□□□ 0.82
C9orf3-207ENST00000445181 RAB39BQ96DA2 213 aa20.17■□□□□ 0.82
C9orf3-207ENST00000445181 MRPL48Q96GC5 212 aaKnown RBP20.17■□□□□ 0.82
C9orf3-207ENST00000445181 ADI1Q9BV57 179 aa20.17■□□□□ 0.82
C9orf3-207ENST00000445181 SHARPINQ9H0F6 387 aa20.17■□□□□ 0.82
C9orf3-207ENST00000445181 ZNF665Q9H7R5 613 aa20.17■□□□□ 0.82
C9orf3-207ENST00000445181 RNPEPL1Q9HAU8 725 aa20.17■□□□□ 0.82
C9orf3-207ENST00000445181 G6PC2Q9NQR9 355 aa20.17■□□□□ 0.82
C9orf3-207ENST00000445181 LPAR3Q9UBY5 353 aa20.17■□□□□ 0.82
C9orf3-207ENST00000445181 ANXA2P2A6NMY6 339 aa20.16■□□□□ 0.82
C9orf3-207ENST00000445181 MTRF1O75570 445 aaKnown RBP20.16■□□□□ 0.82
C9orf3-207ENST00000445181 CAPGP40121 348 aa20.16■□□□□ 0.82
C9orf3-207ENST00000445181 ADARB1P78563 741 aaKnown RBP20.16■□□□□ 0.82
C9orf3-207ENST00000445181 RAB40BQ12829 278 aa20.16■□□□□ 0.82
C9orf3-207ENST00000445181 MPPED2Q15777 294 aa20.16■□□□□ 0.82
C9orf3-207ENST00000445181 THAP5Q7Z6K1 395 aa20.16■□□□□ 0.82
C9orf3-207ENST00000445181 ELMOD2Q8IZ81 293 aa20.16■□□□□ 0.82
C9orf3-207ENST00000445181 SEMA6DQ8NFY4 1073 aa20.16■□□□□ 0.82
C9orf3-207ENST00000445181 CNIH3Q8TBE1 160 aa20.16■□□□□ 0.82
C9orf3-207ENST00000445181 PIGCQ92535 297 aa20.16■□□□□ 0.82
C9orf3-207ENST00000445181 MYCBPQ99417 103 aaPredicted RBP20.16■□□□□ 0.82
C9orf3-207ENST00000445181 MICU1Q9BPX6 476 aa20.16■□□□□ 0.82
C9orf3-207ENST00000445181 ACOXLQ9NUZ1 547 aa20.16■□□□□ 0.82
C9orf3-207ENST00000445181 PCDHB10Q9UN67 800 aa20.16■□□□□ 0.82
C9orf3-207ENST00000445181 MPC1Q9Y5U8 109 aa20.16■□□□□ 0.82
C9orf3-207ENST00000445181 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP20.15■□□□□ 0.821e-7■■□□□ 11.9
C9orf3-207ENST00000445181 ZNF816-ZNF321PA0A0X1KG74 233 aa20.15■□□□□ 0.82
C9orf3-207ENST00000445181 A6NLC8 198 aa20.15■□□□□ 0.82
C9orf3-207ENST00000445181 ZNF850A8MQ14 1090 aa20.15■□□□□ 0.82
C9orf3-207ENST00000445181 CST4P01036 141 aa20.15■□□□□ 0.82
C9orf3-207ENST00000445181 IGHV2-70P01814 119 aa20.15■□□□□ 0.82
C9orf3-207ENST00000445181 ATP6V1B1P15313 513 aa20.15■□□□□ 0.82
C9orf3-207ENST00000445181 CDH15P55291 814 aa20.15■□□□□ 0.82
C9orf3-207ENST00000445181 LMO4P61968 165 aa20.15■□□□□ 0.82
C9orf3-207ENST00000445181 RIPPLY1Q0D2K3 151 aa20.15■□□□□ 0.82
C9orf3-207ENST00000445181 PRDX4Q13162 271 aa20.15■□□□□ 0.82
C9orf3-207ENST00000445181 IL18R1Q13478 541 aa20.15■□□□□ 0.82
C9orf3-207ENST00000445181 ODF4Q2M2E3 257 aa20.15■□□□□ 0.82
C9orf3-207ENST00000445181 ZNF181Q2M3W8 571 aa20.15■□□□□ 0.82
C9orf3-207ENST00000445181 KLHL22Q53GT1 634 aa20.15■□□□□ 0.82
C9orf3-207ENST00000445181 KCTD20Q7Z5Y7 419 aa20.15■□□□□ 0.82
C9orf3-207ENST00000445181 PLPP7Q8NBV4 271 aa20.15■□□□□ 0.82
C9orf3-207ENST00000445181 RORBQ92753 470 aa20.15■□□□□ 0.82
C9orf3-207ENST00000445181 HIST1H2AAQ96QV6 131 aa20.15■□□□□ 0.82
C9orf3-207ENST00000445181 PPP1R3EQ9H7J1 279 aa20.15■□□□□ 0.82
C9orf3-207ENST00000445181 LPAR2Q9HBW0 351 aa20.15■□□□□ 0.82
C9orf3-207ENST00000445181 ABCB9Q9NP78 766 aa20.15■□□□□ 0.82
C9orf3-207ENST00000445181 SLC22A13Q9Y226 551 aa20.15■□□□□ 0.82
C9orf3-207ENST00000445181 PIGLQ9Y2B2 252 aa20.15■□□□□ 0.82
C9orf3-207ENST00000445181 B4DSR2 109 aa20.14■□□□□ 0.81
C9orf3-207ENST00000445181 P2RY10O00398 339 aa20.14■□□□□ 0.81
C9orf3-207ENST00000445181 FAM20BO75063 409 aa20.14■□□□□ 0.81
C9orf3-207ENST00000445181 WBP4O75554 376 aaKnown RBP20.14■□□□□ 0.81
C9orf3-207ENST00000445181 ZNF205O95201 554 aa20.14■□□□□ 0.81
C9orf3-207ENST00000445181 PSMB10P40306 273 aa20.14■□□□□ 0.81
C9orf3-207ENST00000445181 PMELP40967 661 aa20.14■□□□□ 0.81
C9orf3-207ENST00000445181 ACTA2P62736 377 aa20.14■□□□□ 0.81
C9orf3-207ENST00000445181 ACTG2P63267 376 aa20.14■□□□□ 0.81
C9orf3-207ENST00000445181 ZMYND11Q15326 602 aa20.14■□□□□ 0.81
C9orf3-207ENST00000445181 SMN1Q16637 294 aaKnown RBP20.14■□□□□ 0.81
C9orf3-207ENST00000445181 CDONQ4KMG0 1287 aa20.14■□□□□ 0.81
C9orf3-207ENST00000445181 CATSPERDQ86XM0 798 aa20.14■□□□□ 0.81
C9orf3-207ENST00000445181 ZDHHC23Q8IYP9 409 aa20.14■□□□□ 0.81
C9orf3-207ENST00000445181 KLHL36Q8N4N3 616 aa20.14■□□□□ 0.81
C9orf3-207ENST00000445181 SPICQ8N5J4 248 aa20.14■□□□□ 0.81
C9orf3-207ENST00000445181 Q8TCH9 128 aa20.14■□□□□ 0.81
C9orf3-207ENST00000445181 ITFG2Q969R8 447 aa20.14■□□□□ 0.81
C9orf3-207ENST00000445181 RTL8AQ9BWD3 113 aa20.14■□□□□ 0.81
C9orf3-207ENST00000445181 C1orf123Q9NWV4 160 aa20.14■□□□□ 0.81
C9orf3-207ENST00000445181 MYRFQ9Y2G1 1151 aa20.14■□□□□ 0.81
C9orf3-207ENST00000445181 FBN1P35555 2871 aaKnown RBP20.13■□□□□ 0.81
C9orf3-207ENST00000445181 MALRD1Q5VYJ5 2156 aa20.13■□□□□ 0.81
C9orf3-207ENST00000445181 hCG_1807616A0A1W2PRN6 198 aa20.13■□□□□ 0.81
C9orf3-207ENST00000445181 FAM157AC9JC47 383 aa20.13■□□□□ 0.81
C9orf3-207ENST00000445181 H0YAE9 185 aa20.13■□□□□ 0.81
C9orf3-207ENST00000445181 J3QLW9 94 aa20.13■□□□□ 0.81
C9orf3-207ENST00000445181 DHRS3O75911 302 aa20.13■□□□□ 0.81
C9orf3-207ENST00000445181 IGLV3-1P01715 115 aa20.13■□□□□ 0.81
C9orf3-207ENST00000445181 IGHV2-5P01817 119 aa20.13■□□□□ 0.81
C9orf3-207ENST00000445181 ZNF19P17023 458 aa20.13■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms