RNA–Protein interactions for RNA: ENST00000442201.6

CCDC39-201, Transcript of coiled-coil domain containing 39, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCDC39, Length 3,279 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-201ENST00000442201 LOC400499M0QZD8 3231 aa7.11□□□□□ -1.27
CCDC39-201ENST00000442201 CFAP47Q6ZTR5 3102 aa7.11□□□□□ -1.27
CCDC39-201ENST00000442201 CD8B2A6NJW9 211 aa7.1□□□□□ -1.27
CCDC39-201ENST00000442201 H2BFMP0C1H6 154 aa7.1□□□□□ -1.27
CCDC39-201ENST00000442201 CD8BP10966 210 aa7.1□□□□□ -1.27
CCDC39-201ENST00000442201 PAX6P26367 422 aa7.1□□□□□ -1.27
CCDC39-201ENST00000442201 NANOS3P60323 173 aaKnown RBP7.1□□□□□ -1.27
CCDC39-201ENST00000442201 MRPS34P82930 218 aaKnown RBP7.1□□□□□ -1.27
CCDC39-201ENST00000442201 HABP2Q14520 560 aaPredicted RBP7.1□□□□□ -1.27
CCDC39-201ENST00000442201 TMEM95Q3KNT9 176 aa7.1□□□□□ -1.27
CCDC39-201ENST00000442201 FAM74A1Q5RGS3 127 aa7.1□□□□□ -1.27
CCDC39-201ENST00000442201 C3P1Q6ZMU1 363 aa7.1□□□□□ -1.27
CCDC39-201ENST00000442201 TMEM91Q6ZNR0 172 aa7.1□□□□□ -1.27
CCDC39-201ENST00000442201 P4HA3Q7Z4N8 544 aa7.1□□□□□ -1.27
CCDC39-201ENST00000442201 HIST2H2ABQ8IUE6 130 aaPredicted RBP7.1□□□□□ -1.27
CCDC39-201ENST00000442201 TEX19Q8NA77 164 aa7.1□□□□□ -1.27
CCDC39-201ENST00000442201 ABHD4Q8TB40 342 aa7.1□□□□□ -1.27
CCDC39-201ENST00000442201 SCARB1Q8WTV0 552 aa7.1□□□□□ -1.27
CCDC39-201ENST00000442201 RNF133Q8WVZ7 376 aa7.1□□□□□ -1.27
CCDC39-201ENST00000442201 HSD17B8Q92506 261 aa7.1□□□□□ -1.27
CCDC39-201ENST00000442201 SLAMF6Q96DU3 332 aa7.1□□□□□ -1.27
CCDC39-201ENST00000442201 FAM122AQ96E09 287 aa7.1□□□□□ -1.27
CCDC39-201ENST00000442201 PDCD1LG2Q9BQ51 273 aa7.1□□□□□ -1.27
CCDC39-201ENST00000442201 OCSTAMPQ9BR26 566 aa7.1□□□□□ -1.27
CCDC39-201ENST00000442201 EGLN1Q9GZT9 426 aa7.1□□□□□ -1.27
CCDC39-201ENST00000442201 GP6Q9HCN6 339 aa7.1□□□□□ -1.27
CCDC39-201ENST00000442201 TCF7L1Q9HCS4 588 aa7.1□□□□□ -1.27
CCDC39-201ENST00000442201 GDF2Q9UK05 429 aaPredicted RBP7.1□□□□□ -1.27
CCDC39-201ENST00000442201 LRP12Q9Y561 859 aa7.1□□□□□ -1.27
CCDC39-201ENST00000442201 LHFPL6Q9Y693 200 aa7.1□□□□□ -1.27
CCDC39-201ENST00000442201 MEIKINA0A087WXM9 373 aa7.1□□□□□ -1.27
CCDC39-201ENST00000442201 A0A1B0GTH9 108 aa7.1□□□□□ -1.27
CCDC39-201ENST00000442201 MEX3AA1L020 520 aaKnown RBP7.1□□□□□ -1.27
CCDC39-201ENST00000442201 WISP2O76076 250 aa7.1□□□□□ -1.27
CCDC39-201ENST00000442201 MBP02144 154 aa7.1□□□□□ -1.27
CCDC39-201ENST00000442201 CRYBA1P05813 215 aa7.1□□□□□ -1.27
CCDC39-201ENST00000442201 CRHP06850 196 aa7.1□□□□□ -1.27
CCDC39-201ENST00000442201 PVALBP20472 110 aaPredicted RBP7.1□□□□□ -1.27
CCDC39-201ENST00000442201 C4BPBP20851 252 aa7.1□□□□□ -1.27
CCDC39-201ENST00000442201 CXADRP78310 365 aa7.1□□□□□ -1.27
CCDC39-201ENST00000442201 RBMS2Q15434 407 aaKnown RBP7.1□□□□□ -1.27
CCDC39-201ENST00000442201 MAJINQ3KP22 176 aa7.1□□□□□ -1.27
CCDC39-201ENST00000442201 TSPO2Q5TGU0 170 aa7.1□□□□□ -1.27
CCDC39-201ENST00000442201 OR2G2Q8NGZ5 317 aa7.1□□□□□ -1.27
CCDC39-201ENST00000442201 RPS4Y2Q8TD47 263 aa7.1□□□□□ -1.27
CCDC39-201ENST00000442201 RNF166Q96A37 237 aaPredicted RBP7.1□□□□□ -1.27
CCDC39-201ENST00000442201 MS4A3Q96HJ5 214 aa7.1□□□□□ -1.27
CCDC39-201ENST00000442201 LINC00470Q9BZP3 86 aa7.1□□□□□ -1.27
CCDC39-201ENST00000442201 LUZP4Q9P127 313 aa7.1□□□□□ -1.27
CCDC39-201ENST00000442201 ZNF69Q9UC07 566 aa7.1□□□□□ -1.27
CCDC39-201ENST00000442201 ZNF407Q9C0G0 2248 aa7.1□□□□□ -1.27
CCDC39-201ENST00000442201 OR14I1A6ND48 311 aa7.1□□□□□ -1.27
CCDC39-201ENST00000442201 INMT-MINDY4F8WBC2 141 aa7.1□□□□□ -1.27
CCDC39-201ENST00000442201 LYRM1O43325 122 aa7.1□□□□□ -1.27
CCDC39-201ENST00000442201 ZFPL1O95159 310 aa7.1□□□□□ -1.27
CCDC39-201ENST00000442201 CDRT1O95170 752 aa7.1□□□□□ -1.27
CCDC39-201ENST00000442201 WNT11O96014 354 aa7.1□□□□□ -1.27
CCDC39-201ENST00000442201 IL1AP01583 271 aa7.1□□□□□ -1.27
CCDC39-201ENST00000442201 NPR2P20594 1047 aa7.1□□□□□ -1.27
CCDC39-201ENST00000442201 AZGP1P25311 298 aaKnown RBP7.1□□□□□ -1.27
CCDC39-201ENST00000442201 HTR5AP47898 357 aa7.1□□□□□ -1.27
CCDC39-201ENST00000442201 SNRPEP62304 92 aaKnown RBP7.1□□□□□ -1.27
CCDC39-201ENST00000442201 INSL4Q14641 139 aa7.1□□□□□ -1.27
CCDC39-201ENST00000442201 CEACAM16Q2WEN9 425 aa7.1□□□□□ -1.27
CCDC39-201ENST00000442201 ACSM3Q53FZ2 586 aa7.1□□□□□ -1.27
CCDC39-201ENST00000442201 FDX2Q6P4F2 183 aa7.1□□□□□ -1.27
CCDC39-201ENST00000442201 CLEC2AQ6UVW9 174 aa7.1□□□□□ -1.27
CCDC39-201ENST00000442201 ZC3HAV1Q7Z2W4 902 aaKnown RBP7.1□□□□□ -1.27
CCDC39-201ENST00000442201 CEACAM19Q7Z692 300 aa7.1□□□□□ -1.27
CCDC39-201ENST00000442201 GLCCI1Q86VQ1 547 aa7.1□□□□□ -1.27
CCDC39-201ENST00000442201 FJX1Q86VR8 437 aa7.1□□□□□ -1.27
CCDC39-201ENST00000442201 OR5AK2Q8NH90 309 aa7.1□□□□□ -1.27
CCDC39-201ENST00000442201 APH1AQ96BI3 265 aa7.1□□□□□ -1.27
CCDC39-201ENST00000442201 ZNF837Q96EG3 531 aaPredicted RBP7.1□□□□□ -1.27
CCDC39-201ENST00000442201 COMMD4Q9H0A8 199 aa7.1□□□□□ -1.27
CCDC39-201ENST00000442201 OPN3Q9H1Y3 402 aaPredicted RBP7.1□□□□□ -1.27
CCDC39-201ENST00000442201 GPR35Q9HC97 309 aa7.1□□□□□ -1.27
CCDC39-201ENST00000442201 FRRS1LQ9P0K9 344 aa7.1□□□□□ -1.27
CCDC39-201ENST00000442201 GTF2A1LQ9UNN4 478 aa7.1□□□□□ -1.27
CCDC39-201ENST00000442201 ZNF281Q9Y2X9 895 aa7.1□□□□□ -1.27
CCDC39-201ENST00000442201 ANKRD11Q6UB99 2663 aaPredicted RBP7.1□□□□□ -1.27
CCDC39-201ENST00000442201 FRYQ5TBA9 3013 aa7.09□□□□□ -1.27
CCDC39-201ENST00000442201 A0A087WV48 116 aa7.09□□□□□ -1.27
CCDC39-201ENST00000442201 ZNF878C9JN71 531 aa7.09□□□□□ -1.27
CCDC39-201ENST00000442201 STOMP27105 288 aa7.09□□□□□ -1.27
CCDC39-201ENST00000442201 SSTR2P30874 369 aa7.09□□□□□ -1.27
CCDC39-201ENST00000442201 RPS19P39019 145 aaKnown RBP7.09□□□□□ -1.27
CCDC39-201ENST00000442201 CCR9P51686 369 aa7.09□□□□□ -1.27
CCDC39-201ENST00000442201 NUTF2P61970 127 aaKnown RBP7.09□□□□□ -1.27
CCDC39-201ENST00000442201 ATPAF1Q5TC12 328 aaPredicted RBP7.09□□□□□ -1.27
CCDC39-201ENST00000442201 FAM27BQ5VT28 67 aa7.09□□□□□ -1.27
CCDC39-201ENST00000442201 FAM180AQ6UWF9 173 aa7.09□□□□□ -1.27
CCDC39-201ENST00000442201 ADGRE4PQ86SQ3 457 aa7.09□□□□□ -1.27
CCDC39-201ENST00000442201 ZNF100Q8IYN0 542 aa7.09□□□□□ -1.27
CCDC39-201ENST00000442201 ZNF676Q8N7Q3 588 aa7.09□□□□□ -1.27
CCDC39-201ENST00000442201 NABP1Q96AH0 204 aa7.09□□□□□ -1.27
CCDC39-201ENST00000442201 C4orf45Q96LM5 186 aa7.09□□□□□ -1.27
CCDC39-201ENST00000442201 FOXB1Q99853 325 aa7.09□□□□□ -1.27
CCDC39-201ENST00000442201 MED28Q9H204 178 aa7.09□□□□□ -1.27
CCDC39-201ENST00000442201 SLC7A10Q9NS82 523 aa7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms