RNA–Protein interactions for RNA: ENST00000441587.2

ALMS1-IT1-201, ALMS1 intronic transcript 1, humanhuman

TSL 1 (best) BASIC

Gene ALMS1-IT1, Length 2,107 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1-IT1-201ENST00000441587 KRTAP23-1A1A580 65 aa5.12□□□□□ -1.59
ALMS1-IT1-201ENST00000441587 LRP5LA4QPB2 252 aa5.12□□□□□ -1.59
ALMS1-IT1-201ENST00000441587 TVP23AA6NH52 213 aa5.12□□□□□ -1.59
ALMS1-IT1-201ENST00000441587 C2CD4BA6NLJ0 364 aa5.12□□□□□ -1.59
ALMS1-IT1-201ENST00000441587 LRRC30A6NM36 301 aa5.12□□□□□ -1.59
ALMS1-IT1-201ENST00000441587 MPZL1O95297 269 aa5.12□□□□□ -1.59
ALMS1-IT1-201ENST00000441587 TMEM50AO95807 157 aa5.12□□□□□ -1.59
ALMS1-IT1-201ENST00000441587 C1QAP02745 245 aa5.12□□□□□ -1.59
ALMS1-IT1-201ENST00000441587 NMBP08949 121 aa5.12□□□□□ -1.59
ALMS1-IT1-201ENST00000441587 HIST1H1CP16403 213 aaKnown RBP5.12□□□□□ -1.59
ALMS1-IT1-201ENST00000441587 CDKN2BP42772 138 aa5.12□□□□□ -1.59
ALMS1-IT1-201ENST00000441587 EFNB2P52799 333 aa5.12□□□□□ -1.59
ALMS1-IT1-201ENST00000441587 SLC35A2P78381 396 aa5.12□□□□□ -1.59
ALMS1-IT1-201ENST00000441587 HOXA4Q00056 320 aaPredicted RBP5.12□□□□□ -1.59
ALMS1-IT1-201ENST00000441587 DEFA5Q01523 94 aa5.12□□□□□ -1.59
ALMS1-IT1-201ENST00000441587 IL10RBQ08334 325 aa5.12□□□□□ -1.59
ALMS1-IT1-201ENST00000441587 GAGE2BQ13066 116 aa5.12□□□□□ -1.59
ALMS1-IT1-201ENST00000441587 TSNQ15631 228 aaKnown RBP5.12□□□□□ -1.59
ALMS1-IT1-201ENST00000441587 ATP6V1FQ16864 119 aa5.12□□□□□ -1.59
ALMS1-IT1-201ENST00000441587 ZSWIM7Q19AV6 140 aa5.12□□□□□ -1.59
ALMS1-IT1-201ENST00000441587 GAGE2EQ4V326 116 aa5.12□□□□□ -1.59
ALMS1-IT1-201ENST00000441587 CARD16Q5EG05 197 aa5.12□□□□□ -1.59
ALMS1-IT1-201ENST00000441587 FAM74A1Q5RGS3 127 aa5.12□□□□□ -1.59
ALMS1-IT1-201ENST00000441587 WDR25Q64LD2 544 aaPredicted RBP5.12□□□□□ -1.59
ALMS1-IT1-201ENST00000441587 GAGE2AQ6NT46 116 aa5.12□□□□□ -1.59
ALMS1-IT1-201ENST00000441587 TBPL2Q6SJ96 375 aa5.12□□□□□ -1.59
ALMS1-IT1-201ENST00000441587 GOLGA7Q7Z5G4 137 aa5.12□□□□□ -1.59
ALMS1-IT1-201ENST00000441587 RYBPQ8N488 228 aaPredicted RBP5.12□□□□□ -1.59
ALMS1-IT1-201ENST00000441587 ZNF283Q8N7M2 679 aa5.12□□□□□ -1.59
ALMS1-IT1-201ENST00000441587 SPATA22Q8NHS9 363 aa5.12□□□□□ -1.59
ALMS1-IT1-201ENST00000441587 GPR151Q8TDV0 419 aa5.12□□□□□ -1.59
ALMS1-IT1-201ENST00000441587 NTNG2Q96CW9 530 aa5.12□□□□□ -1.59
ALMS1-IT1-201ENST00000441587 CDCA4Q9BXL8 241 aa5.12□□□□□ -1.59
ALMS1-IT1-201ENST00000441587 SLC29A3Q9BZD2 475 aa5.12□□□□□ -1.59
ALMS1-IT1-201ENST00000441587 ISYNA1Q9NPH2 558 aa5.12□□□□□ -1.59
ALMS1-IT1-201ENST00000441587 PHPT1Q9NRX4 125 aaPredicted RBP5.12□□□□□ -1.59
ALMS1-IT1-201ENST00000441587 GPATCH2LQ9NWQ4 482 aa5.12□□□□□ -1.59
ALMS1-IT1-201ENST00000441587 GAGE2DQ9UEU5 116 aa5.12□□□□□ -1.59
ALMS1-IT1-201ENST00000441587 FBXL2Q9UKC9 423 aa5.12□□□□□ -1.59
ALMS1-IT1-201ENST00000441587 LAMP3Q9UQV4 416 aa5.12□□□□□ -1.59
ALMS1-IT1-201ENST00000441587 ZNF638Q14966 1978 aaKnown RBP5.12□□□□□ -1.59
ALMS1-IT1-201ENST00000441587 PLXNA1Q9UIW2 1896 aa5.12□□□□□ -1.59
ALMS1-IT1-201ENST00000441587 OR6C6A6NF89 314 aa5.12□□□□□ -1.59
ALMS1-IT1-201ENST00000441587 MRASO14807 208 aa5.12□□□□□ -1.59
ALMS1-IT1-201ENST00000441587 TPST1O60507 370 aa5.12□□□□□ -1.59
ALMS1-IT1-201ENST00000441587 LATS1O95835 1130 aa5.12□□□□□ -1.59
ALMS1-IT1-201ENST00000441587 HLA-AP01891 365 aaKnown RBP5.12□□□□□ -1.59
ALMS1-IT1-201ENST00000441587 HLA-DQB1P01920 261 aa5.12□□□□□ -1.59
ALMS1-IT1-201ENST00000441587 LGALS2P05162 132 aa5.12□□□□□ -1.59
ALMS1-IT1-201ENST00000441587 CRYBA1P05813 215 aa5.12□□□□□ -1.59
ALMS1-IT1-201ENST00000441587 BCHEP06276 602 aa5.12□□□□□ -1.59
ALMS1-IT1-201ENST00000441587 WNT2P09544 360 aa5.12□□□□□ -1.59
ALMS1-IT1-201ENST00000441587 ZNF35P13682 527 aa5.12□□□□□ -1.59
ALMS1-IT1-201ENST00000441587 EPCAMP16422 314 aa5.12□□□□□ -1.59
ALMS1-IT1-201ENST00000441587 ZNF43P17038 809 aa5.12□□□□□ -1.59
ALMS1-IT1-201ENST00000441587 GADD45AP24522 165 aa5.12□□□□□ -1.59
ALMS1-IT1-201ENST00000441587 PRDX3P30048 256 aaKnown RBP5.12□□□□□ -1.59
ALMS1-IT1-201ENST00000441587 MAGEA5P43359 124 aa5.12□□□□□ -1.59
ALMS1-IT1-201ENST00000441587 CX3CR1P49238 355 aa5.12□□□□□ -1.59
ALMS1-IT1-201ENST00000441587 FUT6P51993 359 aa5.12□□□□□ -1.59
ALMS1-IT1-201ENST00000441587 TMEM50BP56557 158 aa5.12□□□□□ -1.59
ALMS1-IT1-201ENST00000441587 DNAJB13P59910 316 aa5.12□□□□□ -1.59
ALMS1-IT1-201ENST00000441587 CD81P60033 236 aa5.12□□□□□ -1.59
ALMS1-IT1-201ENST00000441587 RPS15AP62244 130 aaKnown RBP5.12□□□□□ -1.59
ALMS1-IT1-201ENST00000441587 HOXC5Q00444 222 aa5.12□□□□□ -1.59
ALMS1-IT1-201ENST00000441587 BIKQ13323 160 aa5.12□□□□□ -1.59
ALMS1-IT1-201ENST00000441587 NFATC4Q14934 902 aa5.12□□□□□ -1.59
ALMS1-IT1-201ENST00000441587 EXOSC7Q15024 291 aaKnown RBP5.12□□□□□ -1.59
ALMS1-IT1-201ENST00000441587 ZNF79Q15937 498 aa5.12□□□□□ -1.59
ALMS1-IT1-201ENST00000441587 SPIN4Q56A73 249 aa5.12□□□□□ -1.59
ALMS1-IT1-201ENST00000441587 RGMBQ6NW40 437 aa5.12□□□□□ -1.59
ALMS1-IT1-201ENST00000441587 CYS1Q717R9 158 aa5.12□□□□□ -1.59
ALMS1-IT1-201ENST00000441587 OLIG3Q7RTU3 272 aa5.12□□□□□ -1.59
ALMS1-IT1-201ENST00000441587 BEST3Q8N1M1 668 aa5.12□□□□□ -1.59
ALMS1-IT1-201ENST00000441587 OR56A4Q8NGH8 313 aa5.12□□□□□ -1.59
ALMS1-IT1-201ENST00000441587 OR4L1Q8NH43 312 aa5.12□□□□□ -1.59
ALMS1-IT1-201ENST00000441587 LYPD6BQ8NI32 183 aa5.12□□□□□ -1.59
ALMS1-IT1-201ENST00000441587 PPTC7Q8NI37 304 aa5.12□□□□□ -1.59
ALMS1-IT1-201ENST00000441587 ASB10Q8WXI3 467 aa5.12□□□□□ -1.59
ALMS1-IT1-201ENST00000441587 RAB8BQ92930 207 aa5.12□□□□□ -1.59
ALMS1-IT1-201ENST00000441587 TMEM18Q96B42 140 aa5.12□□□□□ -1.59
ALMS1-IT1-201ENST00000441587 ZNF503Q96F45 646 aa5.12□□□□□ -1.59
ALMS1-IT1-201ENST00000441587 TMEM208Q9BTX3 173 aa5.12□□□□□ -1.59
ALMS1-IT1-201ENST00000441587 MED28Q9H204 178 aa5.12□□□□□ -1.59
ALMS1-IT1-201ENST00000441587 REEP4Q9H6H4 257 aa5.12□□□□□ -1.59
ALMS1-IT1-201ENST00000441587 FKRPQ9H9S5 495 aa5.12□□□□□ -1.59
ALMS1-IT1-201ENST00000441587 PNRC2Q9NPJ4 139 aaKnown RBP5.12□□□□□ -1.59
ALMS1-IT1-201ENST00000441587 RBFOX1Q9NWB1 397 aaKnown RBP5.12□□□□□ -1.59
ALMS1-IT1-201ENST00000441587 C1RLQ9NZP8 487 aa5.12□□□□□ -1.59
ALMS1-IT1-201ENST00000441587 ZSWIM8A7E2V4 1837 aa5.11□□□□□ -1.59
ALMS1-IT1-201ENST00000441587 COL1A2P08123 1366 aa5.11□□□□□ -1.59
ALMS1-IT1-201ENST00000441587 TRIP11Q15643 1979 aa5.11□□□□□ -1.59
ALMS1-IT1-201ENST00000441587 FNDC1Q4ZHG4 1894 aaPredicted RBP5.11□□□□□ -1.59
ALMS1-IT1-201ENST00000441587 KIR2DL5BA0A0G2JN68 375 aa5.11□□□□□ -1.59
ALMS1-IT1-201ENST00000441587 KIR2DL5BA0A0G2JPC4 375 aa5.11□□□□□ -1.59
ALMS1-IT1-201ENST00000441587 A0A1W2PPV9 198 aa5.11□□□□□ -1.59
ALMS1-IT1-201ENST00000441587 TMEM150CB9EJG8 249 aa5.11□□□□□ -1.59
ALMS1-IT1-201ENST00000441587 PLA2G10O15496 165 aa5.11□□□□□ -1.59
ALMS1-IT1-201ENST00000441587 SSNA1O43805 119 aa5.11□□□□□ -1.59
ALMS1-IT1-201ENST00000441587 PDYNP01213 254 aa5.11□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms