RNA–Protein interactions for RNA: ENST00000441080.2

PFDN4-202, Transcript of prefoldin subunit 4, humanhuman

TSL 5

Gene PFDN4, Length 579 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN4-202ENST00000441080 SUPT3HB4E1H0 165 aa2.43□□□□□ -2.02
PFDN4-202ENST00000441080 MANBAO00462 879 aa2.43□□□□□ -2.02
PFDN4-202ENST00000441080 MPDU1O75352 247 aa2.43□□□□□ -2.02
PFDN4-202ENST00000441080 SCO1O75880 301 aa2.43□□□□□ -2.02
PFDN4-202ENST00000441080 NTF3P20783 257 aa2.43□□□□□ -2.02
PFDN4-202ENST00000441080 MPV17P39210 176 aa2.43□□□□□ -2.02
PFDN4-202ENST00000441080 GPR1P46091 355 aa2.43□□□□□ -2.02
PFDN4-202ENST00000441080 TAS2R43P59537 309 aa2.43□□□□□ -2.02
PFDN4-202ENST00000441080 GBE1Q04446 702 aa2.43□□□□□ -2.02
PFDN4-202ENST00000441080 DNAJC3Q13217 504 aa2.43□□□□□ -2.02
PFDN4-202ENST00000441080 IL15RAQ13261 267 aa2.43□□□□□ -2.02
PFDN4-202ENST00000441080 MAD2L1BPQ15013 274 aaPredicted RBP2.43□□□□□ -2.02
PFDN4-202ENST00000441080 LUZP6Q538Z0 58 aa2.43□□□□□ -2.02
PFDN4-202ENST00000441080 OR2T5Q6IEZ7 315 aa2.43□□□□□ -2.02
PFDN4-202ENST00000441080 CLEC2AQ6UVW9 174 aa2.43□□□□□ -2.02
PFDN4-202ENST00000441080 C16orf47Q6ZP98 133 aaPredicted RBP2.43□□□□□ -2.02
PFDN4-202ENST00000441080 FAM122BQ7Z309 247 aa2.43□□□□□ -2.02
PFDN4-202ENST00000441080 RAB43Q86YS6 212 aa2.43□□□□□ -2.02
PFDN4-202ENST00000441080 CNPY4Q8N129 248 aa2.43□□□□□ -2.02
PFDN4-202ENST00000441080 STK40Q8N2I9 435 aa2.43□□□□□ -2.02
PFDN4-202ENST00000441080 INO80EQ8NBZ0 244 aaPredicted RBP2.43□□□□□ -2.02
PFDN4-202ENST00000441080 OR2T29Q8NH02 315 aa2.43□□□□□ -2.02
PFDN4-202ENST00000441080 RCN3Q96D15 328 aa2.43□□□□□ -2.02
PFDN4-202ENST00000441080 TAS2R5Q9NYW4 299 aa2.43□□□□□ -2.02
PFDN4-202ENST00000441080 SIGLEC7Q9Y286 467 aa2.43□□□□□ -2.02
PFDN4-202ENST00000441080 ADGRL1O94910 1474 aa2.43□□□□□ -2.02
PFDN4-202ENST00000441080 TNKS1BP1Q9C0C2 1729 aaKnown RBP2.42□□□□□ -2.02
PFDN4-202ENST00000441080 A0A0A6YYD5 115 aa2.42□□□□□ -2.02
PFDN4-202ENST00000441080 CTNSO60931 367 aa2.42□□□□□ -2.02
PFDN4-202ENST00000441080 TRBV12-3P01733 135 aa2.42□□□□□ -2.02
PFDN4-202ENST00000441080 TPM2P07951 284 aa2.42□□□□□ -2.02
PFDN4-202ENST00000441080 CD28P10747 220 aa2.42□□□□□ -2.02
PFDN4-202ENST00000441080 IDH2P48735 452 aaKnown RBP2.42□□□□□ -2.02
PFDN4-202ENST00000441080 OR2B8PP59922 312 aa2.42□□□□□ -2.02
PFDN4-202ENST00000441080 OR1Q1Q15612 314 aa2.42□□□□□ -2.02
PFDN4-202ENST00000441080 HADHQ16836 314 aaKnown RBP2.42□□□□□ -2.02
PFDN4-202ENST00000441080 C6orf99Q4VX62 202 aa2.42□□□□□ -2.02
PFDN4-202ENST00000441080 MFSD14CQ5VZR4 134 aa2.42□□□□□ -2.02
PFDN4-202ENST00000441080 C1orf64Q8NEQ6 169 aa2.42□□□□□ -2.02
PFDN4-202ENST00000441080 OR52K2Q8NGK3 314 aa2.42□□□□□ -2.02
PFDN4-202ENST00000441080 IQCGQ9H095 443 aaKnown RBP2.42□□□□□ -2.02
PFDN4-202ENST00000441080 ZNF257Q9Y2Q1 563 aa2.42□□□□□ -2.02
PFDN4-202ENST00000441080 IGKV3D-11A0A0A0MRZ8 115 aa2.41□□□□□ -2.02
PFDN4-202ENST00000441080 VGLL3A8MV65 326 aa2.41□□□□□ -2.02
PFDN4-202ENST00000441080 PRAMEF26H0Y7S4 382 aa2.41□□□□□ -2.02
PFDN4-202ENST00000441080 MFNGO00587 321 aa2.41□□□□□ -2.02
PFDN4-202ENST00000441080 SIVA1O15304 175 aa2.41□□□□□ -2.02
PFDN4-202ENST00000441080 OR7C2O60412 319 aa2.41□□□□□ -2.02
PFDN4-202ENST00000441080 PTHP01270 115 aa2.41□□□□□ -2.02
PFDN4-202ENST00000441080 IGLV2-8P01709 118 aa2.41□□□□□ -2.02
PFDN4-202ENST00000441080 TACSTD2P09758 323 aa2.41□□□□□ -2.02
PFDN4-202ENST00000441080 GFAPP14136 432 aa2.41□□□□□ -2.02
PFDN4-202ENST00000441080 CD82P27701 267 aa2.41□□□□□ -2.02
PFDN4-202ENST00000441080 TGFBR1P36897 503 aa2.41□□□□□ -2.02
PFDN4-202ENST00000441080 OR1G1P47890 313 aa2.41□□□□□ -2.02
PFDN4-202ENST00000441080 CLDN18P56856 261 aa2.41□□□□□ -2.02
PFDN4-202ENST00000441080 RPS11P62280 158 aaKnown RBP eCLIP2.41□□□□□ -2.02
PFDN4-202ENST00000441080 ELF3P78545 371 aaPredicted RBP2.41□□□□□ -2.02
PFDN4-202ENST00000441080 BTN1A1Q13410 526 aa2.41□□□□□ -2.02
PFDN4-202ENST00000441080 TMEM236Q5W0B7 351 aa2.41□□□□□ -2.02
PFDN4-202ENST00000441080 SLC30A8Q8IWU4 369 aa2.41□□□□□ -2.02
PFDN4-202ENST00000441080 ZNF680Q8NEM1 530 aa2.41□□□□□ -2.02
PFDN4-202ENST00000441080 TMEM159Q96B96 161 aa2.41□□□□□ -2.02
PFDN4-202ENST00000441080 AGMATQ9BSE5 352 aa2.41□□□□□ -2.02
PFDN4-202ENST00000441080 SFXN3Q9BWM7 321 aa2.41□□□□□ -2.02
PFDN4-202ENST00000441080 DEFB129Q9H1M3 183 aa2.41□□□□□ -2.02
PFDN4-202ENST00000441080 LHX5Q9H2C1 402 aa2.41□□□□□ -2.02
PFDN4-202ENST00000441080 CLSTN2Q9H4D0 955 aa2.41□□□□□ -2.02
PFDN4-202ENST00000441080 CD209Q9NNX6 404 aa2.41□□□□□ -2.02
PFDN4-202ENST00000441080 TREX1Q9NSU2 369 aa2.41□□□□□ -2.02
PFDN4-202ENST00000441080 IGKV2-24A0A0C4DH68 120 aa2.4□□□□□ -2.03
PFDN4-202ENST00000441080 GOLGA8JA6NMD2 632 aa2.4□□□□□ -2.03
PFDN4-202ENST00000441080 ZBTB5O15062 677 aa2.4□□□□□ -2.03
PFDN4-202ENST00000441080 PSPHP1O15172 72 aa2.4□□□□□ -2.03
PFDN4-202ENST00000441080 HSBP1O75506 76 aa2.4□□□□□ -2.03
PFDN4-202ENST00000441080 CNMDO75829 334 aa2.4□□□□□ -2.03
PFDN4-202ENST00000441080 FARS2O95363 451 aaKnown RBP2.4□□□□□ -2.03
PFDN4-202ENST00000441080 CATP04040 527 aaKnown RBP2.4□□□□□ -2.03
PFDN4-202ENST00000441080 GOLGA8HP0CJ92 632 aa2.4□□□□□ -2.03
PFDN4-202ENST00000441080 THRAP10827 490 aa2.4□□□□□ -2.03
PFDN4-202ENST00000441080 OR4M2Q8NGB6 313 aa2.4□□□□□ -2.03
PFDN4-202ENST00000441080 GLYATL2Q8WU03 294 aa2.4□□□□□ -2.03
PFDN4-202ENST00000441080 RXFP2Q8WXD0 754 aa2.4□□□□□ -2.03
PFDN4-202ENST00000441080 RDH12Q96NR8 316 aa2.4□□□□□ -2.03
PFDN4-202ENST00000441080 PLEKHF2Q9H8W4 249 aa2.4□□□□□ -2.03
PFDN4-202ENST00000441080 LINC00574Q9H8X3 128 aa2.4□□□□□ -2.03
PFDN4-202ENST00000441080 REEP1Q9H902 201 aa2.4□□□□□ -2.03
PFDN4-202ENST00000441080 DYRK4Q9NR20 520 aa2.4□□□□□ -2.03
PFDN4-202ENST00000441080 DDX19BQ9UMR2 479 aa2.4□□□□□ -2.03
PFDN4-202ENST00000441080 TSPOAP1O95153 1857 aa2.39□□□□□ -2.03
PFDN4-202ENST00000441080 SCELO95171 688 aa2.39□□□□□ -2.03
PFDN4-202ENST00000441080 NELFEP18615 380 aaKnown RBP2.39□□□□□ -2.03
PFDN4-202ENST00000441080 GALR1P47211 349 aa2.39□□□□□ -2.03
PFDN4-202ENST00000441080 BAMBIQ13145 260 aa2.39□□□□□ -2.03
PFDN4-202ENST00000441080 FAM53BQ14153 422 aa2.39□□□□□ -2.03
PFDN4-202ENST00000441080 C5orf64Q2M2E5 130 aa2.39□□□□□ -2.03
PFDN4-202ENST00000441080 PLCXD3Q63HM9 321 aa2.39□□□□□ -2.03
PFDN4-202ENST00000441080 BRD3OSQ6XYD6 125 aa2.39□□□□□ -2.03
PFDN4-202ENST00000441080 CMTM8Q8IZV2 173 aa2.39□□□□□ -2.03
PFDN4-202ENST00000441080 KIF2BQ8N4N8 673 aa2.39□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms