RNA–Protein interactions for RNA: ENST00000440514.1

CPSF4-205, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 3

Gene CPSF4, Length 578 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-205ENST00000440514 ZMYND11Q15326 602 aa15.19■□□□□ 0.02
CPSF4-205ENST00000440514 KLHL22Q53GT1 634 aa15.19■□□□□ 0.02
CPSF4-205ENST00000440514 KCTD20Q7Z5Y7 419 aa15.19■□□□□ 0.02
CPSF4-205ENST00000440514 PEG10Q86TG7 708 aaKnown RBP15.19■□□□□ 0.02
CPSF4-205ENST00000440514 WDR86Q86TI4 376 aa15.19■□□□□ 0.02
CPSF4-205ENST00000440514 ELMOD2Q8IZ81 293 aa15.19■□□□□ 0.02
CPSF4-205ENST00000440514 CELF2-AS1Q8N7Q2 184 aa15.19■□□□□ 0.02
CPSF4-205ENST00000440514 OR8S1Q8NH09 359 aa15.19■□□□□ 0.02
CPSF4-205ENST00000440514 RORBQ92753 470 aa15.19■□□□□ 0.02
CPSF4-205ENST00000440514 GAL3ST1Q99999 423 aa15.19■□□□□ 0.02
CPSF4-205ENST00000440514 MYRFQ9Y2G1 1151 aa15.19■□□□□ 0.02
CPSF4-205ENST00000440514 SNX5Q9Y5X3 404 aa15.19■□□□□ 0.02
CPSF4-205ENST00000440514 FN1P02751 2386 aaKnown RBP15.19■□□□□ 0.02
CPSF4-205ENST00000440514 FAM157AC9JC47 383 aa15.18■□□□□ 0.02
CPSF4-205ENST00000440514 P2RY10O00398 339 aa15.18■□□□□ 0.02
CPSF4-205ENST00000440514 SULT1C4O75897 302 aa15.18■□□□□ 0.02
CPSF4-205ENST00000440514 ZNF205O95201 554 aa15.18■□□□□ 0.02
CPSF4-205ENST00000440514 FADS2O95864 444 aaKnown RBP15.18■□□□□ 0.02
CPSF4-205ENST00000440514 RPSAP08865 295 aaKnown RBP15.18■□□□□ 0.02
CPSF4-205ENST00000440514 GNAO1P09471 354 aa15.18■□□□□ 0.02
CPSF4-205ENST00000440514 HSPA13P48723 471 aa15.18■□□□□ 0.02
CPSF4-205ENST00000440514 BTG1P62324 171 aa15.18■□□□□ 0.02
CPSF4-205ENST00000440514 HOXA4Q00056 320 aaPredicted RBP15.18■□□□□ 0.02
CPSF4-205ENST00000440514 ODF4Q2M2E3 257 aa15.18■□□□□ 0.02
CPSF4-205ENST00000440514 CDONQ4KMG0 1287 aa15.18■□□□□ 0.02
CPSF4-205ENST00000440514 CATSPERDQ86XM0 798 aa15.18■□□□□ 0.02
CPSF4-205ENST00000440514 KLBQ86Z14 1044 aa15.18■□□□□ 0.02
CPSF4-205ENST00000440514 ACBD7Q8N6N7 88 aa15.18■□□□□ 0.02
CPSF4-205ENST00000440514 HAVCR2Q8TDQ0 301 aa15.18■□□□□ 0.02
CPSF4-205ENST00000440514 ZNF665Q9H7R5 613 aa15.18■□□□□ 0.02
CPSF4-205ENST00000440514 INPP5EQ9NRR6 644 aa15.18■□□□□ 0.02
CPSF4-205ENST00000440514 UBAP1Q9NZ09 502 aa15.18■□□□□ 0.02
CPSF4-205ENST00000440514 ZNF850A8MQ14 1090 aa15.17■□□□□ 0.02
CPSF4-205ENST00000440514 IFNL4K9M1U5 179 aa15.17■□□□□ 0.02
CPSF4-205ENST00000440514 PTBP3O95758 552 aaKnown RBP15.17■□□□□ 0.02
CPSF4-205ENST00000440514 IGHV2-5P01817 119 aa15.17■□□□□ 0.02
CPSF4-205ENST00000440514 IGHA1P01876 353 aa15.17■□□□□ 0.02
CPSF4-205ENST00000440514 GRPP07492 148 aa15.17■□□□□ 0.02
CPSF4-205ENST00000440514 FAHP16930 419 aa15.17■□□□□ 0.02
CPSF4-205ENST00000440514 MAP2K3P46734 347 aa15.17■□□□□ 0.02
CPSF4-205ENST00000440514 CDH15P55291 814 aa15.17■□□□□ 0.02
CPSF4-205ENST00000440514 OR12D2P58182 307 aa15.17■□□□□ 0.02
CPSF4-205ENST00000440514 RAB40BQ12829 278 aa15.17■□□□□ 0.02
CPSF4-205ENST00000440514 MED21Q13503 144 aa15.17■□□□□ 0.02
CPSF4-205ENST00000440514 WDR38Q5JTN6 314 aa15.17■□□□□ 0.02
CPSF4-205ENST00000440514 FAM201AQ5SY85 155 aa15.17■□□□□ 0.02
CPSF4-205ENST00000440514 SPERTQ8NA61 448 aa15.17■□□□□ 0.02
CPSF4-205ENST00000440514 SEMA6DQ8NFY4 1073 aa15.17■□□□□ 0.02
CPSF4-205ENST00000440514 OR52I1Q8NGK6 324 aa15.17■□□□□ 0.02
CPSF4-205ENST00000440514 HPSE2Q8WWQ2 592 aa15.17■□□□□ 0.02
CPSF4-205ENST00000440514 PIGCQ92535 297 aa15.17■□□□□ 0.02
CPSF4-205ENST00000440514 RNF166Q96A37 237 aaPredicted RBP15.17■□□□□ 0.02
CPSF4-205ENST00000440514 ITPKCQ96DU7 683 aa15.17■□□□□ 0.02
CPSF4-205ENST00000440514 C1orf159Q96HA4 380 aa15.17■□□□□ 0.02
CPSF4-205ENST00000440514 FGF23Q9GZV9 251 aaPredicted RBP15.17■□□□□ 0.02
CPSF4-205ENST00000440514 LPAR2Q9HBW0 351 aa15.17■□□□□ 0.02
CPSF4-205ENST00000440514 C14orf119Q9NWQ9 140 aa15.17■□□□□ 0.02
CPSF4-205ENST00000440514 HIVEP2P31629 2446 aa15.17■□□□□ 0.02
CPSF4-205ENST00000440514 ZNF816-ZNF321PA0A0X1KG74 233 aa15.16■□□□□ 0.02
CPSF4-205ENST00000440514 A0A1B0GTI1 187 aa15.16■□□□□ 0.02
CPSF4-205ENST00000440514 A6NLC8 198 aa15.16■□□□□ 0.02
CPSF4-205ENST00000440514 LRRC30A6NM36 301 aa15.16■□□□□ 0.02
CPSF4-205ENST00000440514 A8MV72 311 aaPredicted RBP15.16■□□□□ 0.02
CPSF4-205ENST00000440514 H3BSH0 61 aa15.16■□□□□ 0.02
CPSF4-205ENST00000440514 CST4P01036 141 aa15.16■□□□□ 0.02
CPSF4-205ENST00000440514 TGFAP01135 160 aa15.16■□□□□ 0.02
CPSF4-205ENST00000440514 KIR3DL2P43630 455 aa15.16■□□□□ 0.02
CPSF4-205ENST00000440514 AQP4P55087 323 aa15.16■□□□□ 0.02
CPSF4-205ENST00000440514 ACTA2P62736 377 aa15.16■□□□□ 0.02
CPSF4-205ENST00000440514 ACTG2P63267 376 aa15.16■□□□□ 0.02
CPSF4-205ENST00000440514 CSNK2BP67870 215 aa15.16■□□□□ 0.02
CPSF4-205ENST00000440514 MRPL28Q13084 256 aaKnown RBP15.16■□□□□ 0.02
CPSF4-205ENST00000440514 ZNF181Q2M3W8 571 aa15.16■□□□□ 0.02
CPSF4-205ENST00000440514 ZNF826PQ6ZT77 177 aa15.16■□□□□ 0.02
CPSF4-205ENST00000440514 LHFPL3Q86UP9 236 aa15.16■□□□□ 0.02
CPSF4-205ENST00000440514 C8orf59Q8N0T1 100 aaPredicted RBP15.16■□□□□ 0.02
CPSF4-205ENST00000440514 PRSS35Q8N3Z0 413 aa15.16■□□□□ 0.02
CPSF4-205ENST00000440514 OR11L1Q8NGX0 322 aa15.16■□□□□ 0.02
CPSF4-205ENST00000440514 Q8TCH9 128 aa15.16■□□□□ 0.02
CPSF4-205ENST00000440514 C4orf36Q96KX1 117 aa15.16■□□□□ 0.02
CPSF4-205ENST00000440514 ALG8Q9BVK2 526 aa15.16■□□□□ 0.02
CPSF4-205ENST00000440514 FN3KRPQ9HA64 309 aa15.16■□□□□ 0.02
CPSF4-205ENST00000440514 C1orf123Q9NWV4 160 aa15.16■□□□□ 0.02
CPSF4-205ENST00000440514 MPC1Q9Y5U8 109 aa15.16■□□□□ 0.02
CPSF4-205ENST00000440514 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP15.16■□□□□ 0.025e-9■■■■□ 22.2
CPSF4-205ENST00000440514 MALRD1Q5VYJ5 2156 aa15.15■□□□□ 0.02
CPSF4-205ENST00000440514 ANXA2P2A6NMY6 339 aa15.15■□□□□ 0.02
CPSF4-205ENST00000440514 J3QLW9 94 aa15.15■□□□□ 0.02
CPSF4-205ENST00000440514 DHRS3O75911 302 aa15.15■□□□□ 0.02
CPSF4-205ENST00000440514 IRF2P14316 349 aa15.15■□□□□ 0.02
CPSF4-205ENST00000440514 ATP6V1B1P15313 513 aa15.15■□□□□ 0.02
CPSF4-205ENST00000440514 ZNF19P17023 458 aa15.15■□□□□ 0.02
CPSF4-205ENST00000440514 CD80P33681 288 aa15.15■□□□□ 0.02
CPSF4-205ENST00000440514 THBS2P35442 1172 aa15.15■□□□□ 0.02
CPSF4-205ENST00000440514 DMRTC1Q5HYR2 192 aa15.15■□□□□ 0.02
CPSF4-205ENST00000440514 FAM166AQ6J272 317 aa15.15■□□□□ 0.02
CPSF4-205ENST00000440514 THAP5Q7Z6K1 395 aa15.15■□□□□ 0.02
CPSF4-205ENST00000440514 ZDHHC23Q8IYP9 409 aa15.15■□□□□ 0.02
CPSF4-205ENST00000440514 BOLLQ8N9W6 283 aaKnown RBP15.15■□□□□ 0.02
CPSF4-205ENST00000440514 LINC01356Q8N9X3 169 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms