RNA–Protein interactions for RNA: ENST00000440097.5

LIMD1-202, Transcript of LIM domains containing 1, humanhuman

TSL 5 BASIC

Gene LIMD1, Length 2,773 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-202ENST00000440097 FAM117AQ9C073 453 aa12.51□□□□□ -0.41
LIMD1-202ENST00000440097 ASF1BQ9NVP2 202 aa12.51□□□□□ -0.41
LIMD1-202ENST00000440097 TAS2R8Q9NYW2 309 aa12.51□□□□□ -0.41
LIMD1-202ENST00000440097 CYB5R1Q9UHQ9 305 aa12.51□□□□□ -0.41
LIMD1-202ENST00000440097 TRBV5-7A0A0A0MS05 114 aa12.5□□□□□ -0.41
LIMD1-202ENST00000440097 P2RY10O00398 339 aa12.5□□□□□ -0.41
LIMD1-202ENST00000440097 BCL2L11O43521 198 aa12.5□□□□□ -0.41
LIMD1-202ENST00000440097 TMEM127O75204 238 aa12.5□□□□□ -0.41
LIMD1-202ENST00000440097 GLAP06280 429 aa12.5□□□□□ -0.41
LIMD1-202ENST00000440097 RFPL3SP0C7P2 107 aa12.5□□□□□ -0.41
LIMD1-202ENST00000440097 GDF1P27539 372 aa12.5□□□□□ -0.41
LIMD1-202ENST00000440097 RFC3P40938 356 aa12.5□□□□□ -0.41
LIMD1-202ENST00000440097 PRKXP51817 358 aa12.5□□□□□ -0.41
LIMD1-202ENST00000440097 ATXN7L3Q14CW9 347 aaPredicted RBP12.5□□□□□ -0.41
LIMD1-202ENST00000440097 LRRC37A5PQ49AS3 106 aa12.5□□□□□ -0.41
LIMD1-202ENST00000440097 ABHD17BQ5VST6 288 aa12.5□□□□□ -0.41
LIMD1-202ENST00000440097 C2CD4CQ8TF44 421 aa12.5□□□□□ -0.41
LIMD1-202ENST00000440097 RNF133Q8WVZ7 376 aa12.5□□□□□ -0.41
LIMD1-202ENST00000440097 ASB5Q8WWX0 329 aa12.5□□□□□ -0.41
LIMD1-202ENST00000440097 TMEM41AQ96HV5 264 aa12.5□□□□□ -0.41
LIMD1-202ENST00000440097 NAA11Q9BSU3 229 aaPredicted RBP12.5□□□□□ -0.41
LIMD1-202ENST00000440097 A0A0J9YW62 118 aa12.5□□□□□ -0.41
LIMD1-202ENST00000440097 OR5H14A6NHG9 310 aa12.5□□□□□ -0.41
LIMD1-202ENST00000440097 GJE1A6NN92 205 aa12.5□□□□□ -0.41
LIMD1-202ENST00000440097 OR4E1P0C645 316 aa12.5□□□□□ -0.41
LIMD1-202ENST00000440097 CSNK1A1P48729 337 aa12.5□□□□□ -0.41
LIMD1-202ENST00000440097 RAC1P63000 192 aa12.5□□□□□ -0.41
LIMD1-202ENST00000440097 CHAF1BQ13112 559 aa12.5□□□□□ -0.41
LIMD1-202ENST00000440097 EIF3IQ13347 325 aaKnown RBP12.5□□□□□ -0.41
LIMD1-202ENST00000440097 IGSF11Q5DX21 431 aa12.5□□□□□ -0.41
LIMD1-202ENST00000440097 GLT8D1Q68CQ7 371 aa12.5□□□□□ -0.41
LIMD1-202ENST00000440097 UQCC3Q6UW78 93 aa12.5□□□□□ -0.41
LIMD1-202ENST00000440097 TMED4Q7Z7H5 227 aa12.5□□□□□ -0.41
LIMD1-202ENST00000440097 OR51D1Q8NGF3 324 aa12.5□□□□□ -0.41
LIMD1-202ENST00000440097 ASB13Q8WXK3 278 aa12.5□□□□□ -0.41
LIMD1-202ENST00000440097 ZNF385AQ96PM9 386 aaKnown RBP12.5□□□□□ -0.41
LIMD1-202ENST00000440097 CMSS1Q9BQ75 279 aaKnown RBP12.5□□□□□ -0.41
LIMD1-202ENST00000440097 TAS2R4Q9NYW5 299 aa12.5□□□□□ -0.41
LIMD1-202ENST00000440097 GDF2Q9UK05 429 aaPredicted RBP12.5□□□□□ -0.41
LIMD1-202ENST00000440097 LHX6Q9UPM6 363 aa12.5□□□□□ -0.41
LIMD1-202ENST00000440097 DOCK10Q96BY6 2186 aa12.49□□□□□ -0.41
LIMD1-202ENST00000440097 TRAV18A0A075B6X5 111 aa12.49□□□□□ -0.41
LIMD1-202ENST00000440097 GGT3PA6NGU5 568 aa12.49□□□□□ -0.41
LIMD1-202ENST00000440097 GNALP38405 381 aa12.49□□□□□ -0.41
LIMD1-202ENST00000440097 KCNJ3P48549 501 aa12.49□□□□□ -0.41
LIMD1-202ENST00000440097 SNTB1Q13884 538 aaKnown RBP12.49□□□□□ -0.41
LIMD1-202ENST00000440097 TRIP6Q15654 476 aaKnown RBP12.49□□□□□ -0.41
LIMD1-202ENST00000440097 WIPI1Q5MNZ9 446 aaPredicted RBP12.49□□□□□ -0.41
LIMD1-202ENST00000440097 ZNF704Q6ZNC4 412 aaPredicted RBP12.49□□□□□ -0.41
LIMD1-202ENST00000440097 OR1M1Q8NGA1 313 aa12.49□□□□□ -0.41
LIMD1-202ENST00000440097 GAL3ST1Q99999 423 aa12.49□□□□□ -0.41
LIMD1-202ENST00000440097 GPR87Q9BY21 358 aa12.49□□□□□ -0.41
LIMD1-202ENST00000440097 STEAP1Q9UHE8 339 aa12.49□□□□□ -0.41
LIMD1-202ENST00000440097 TNFSF18Q9UNG2 199 aa12.49□□□□□ -0.41
LIMD1-202ENST00000440097 SPENQ96T58 3664 aaKnown RBP12.49□□□□□ -0.41
LIMD1-202ENST00000440097 AKAP13Q12802 2813 aa12.49□□□□□ -0.41
LIMD1-202ENST00000440097 LOC101059948A0A1B0GTJ6 334 aa12.49□□□□□ -0.41
LIMD1-202ENST00000440097 DCDC2BA2VCK2 349 aa12.49□□□□□ -0.41
LIMD1-202ENST00000440097 RER1O15258 196 aa12.49□□□□□ -0.41
LIMD1-202ENST00000440097 SPP1P10451 314 aa12.49□□□□□ -0.41
LIMD1-202ENST00000440097 SLC2A1P11166 492 aa12.49□□□□□ -0.41
LIMD1-202ENST00000440097 GABREP78334 506 aa12.49□□□□□ -0.41
LIMD1-202ENST00000440097 PCK2Q16822 640 aa12.49□□□□□ -0.41
LIMD1-202ENST00000440097 MICBQ29980 383 aa12.49□□□□□ -0.41
LIMD1-202ENST00000440097 GFOD2Q3B7J2 385 aa12.49□□□□□ -0.41
LIMD1-202ENST00000440097 PAN3Q58A45 887 aaKnown RBP12.49□□□□□ -0.41
LIMD1-202ENST00000440097 CDCP2Q5VXM1 449 aa12.49□□□□□ -0.41
LIMD1-202ENST00000440097 LINC00696Q6ZRV3 163 aa12.49□□□□□ -0.41
LIMD1-202ENST00000440097 JAGN1Q8N5M9 183 aa12.49□□□□□ -0.41
LIMD1-202ENST00000440097 RBM24Q9BX46 236 aaKnown RBP12.49□□□□□ -0.41
LIMD1-202ENST00000440097 KCNK15Q9H427 330 aa12.49□□□□□ -0.41
LIMD1-202ENST00000440097 LHFPL6Q9Y693 200 aa12.49□□□□□ -0.41
LIMD1-202ENST00000440097 COL27A1Q8IZC6 1860 aaPredicted RBP12.48□□□□□ -0.41
LIMD1-202ENST00000440097 CTAG2O75638 210 aa12.48□□□□□ -0.41
LIMD1-202ENST00000440097 F12P00748 615 aaPredicted RBP12.48□□□□□ -0.41
LIMD1-202ENST00000440097 CD8AP01732 235 aa12.48□□□□□ -0.41
LIMD1-202ENST00000440097 ITGB2P05107 769 aa12.48□□□□□ -0.41
LIMD1-202ENST00000440097 ITGA5P08648 1049 aa12.48□□□□□ -0.41
LIMD1-202ENST00000440097 ZNF17P17021 662 aa12.48□□□□□ -0.41
LIMD1-202ENST00000440097 SRD5A2P31213 254 aa12.48□□□□□ -0.41
LIMD1-202ENST00000440097 CASRP41180 1078 aa12.48□□□□□ -0.41
LIMD1-202ENST00000440097 SPOCK1Q08629 439 aa12.48□□□□□ -0.41
LIMD1-202ENST00000440097 HYAL4Q2M3T9 481 aa12.48□□□□□ -0.41
LIMD1-202ENST00000440097 STEAP1BQ6NZ63 245 aa12.48□□□□□ -0.41
LIMD1-202ENST00000440097 DEGS2Q6QHC5 323 aa12.48□□□□□ -0.41
LIMD1-202ENST00000440097 BIVMQ86UB2 503 aa12.48□□□□□ -0.41
LIMD1-202ENST00000440097 ZFP82Q8N141 532 aa12.48□□□□□ -0.41
LIMD1-202ENST00000440097 ARMC10Q8N2F6 343 aa12.48□□□□□ -0.41
LIMD1-202ENST00000440097 SPRY4Q9C004 299 aa12.48□□□□□ -0.41
LIMD1-202ENST00000440097 G6PC2Q9NQR9 355 aa12.48□□□□□ -0.41
LIMD1-202ENST00000440097 DEPPQ9NTK1 212 aa12.48□□□□□ -0.41
LIMD1-202ENST00000440097 RAB19A4D1S5 217 aa12.48□□□□□ -0.41
LIMD1-202ENST00000440097 OR14I1A6ND48 311 aa12.48□□□□□ -0.41
LIMD1-202ENST00000440097 C21orf140B9A014 251 aa12.48□□□□□ -0.41
LIMD1-202ENST00000440097 STMND1H3BQB6 276 aa12.48□□□□□ -0.41
LIMD1-202ENST00000440097 OR2F2O95006 317 aa12.48□□□□□ -0.41
LIMD1-202ENST00000440097 CSRP1P21291 193 aaKnown RBP12.48□□□□□ -0.41
LIMD1-202ENST00000440097 CARD18P57730 90 aa12.48□□□□□ -0.41
LIMD1-202ENST00000440097 H3F3AP84243 136 aa12.48□□□□□ -0.41
LIMD1-202ENST00000440097 OR2F1Q13607 317 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms