RNA–Protein interactions for RNA: ENST00000433892.6

CD44-209, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 2,292 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-209ENST00000433892 NAT1P18440 290 aa10.4□□□□□ -0.75
CD44-209ENST00000433892 CCL1P22362 96 aa10.4□□□□□ -0.75
CD44-209ENST00000433892 DHPSP49366 369 aaPredicted RBP10.4□□□□□ -0.75
CD44-209ENST00000433892 VAX1Q5SQQ9 334 aa10.4□□□□□ -0.75
CD44-209ENST00000433892 CLEC18BQ6UXF7 455 aa10.4□□□□□ -0.75
CD44-209ENST00000433892 TMEM17Q86X19 198 aa10.4□□□□□ -0.75
CD44-209ENST00000433892 FAM219AQ8IW50 185 aa10.4□□□□□ -0.75
CD44-209ENST00000433892 ARRDC1Q8N5I2 433 aa10.4□□□□□ -0.75
CD44-209ENST00000433892 OR51T1Q8NGJ9 327 aa10.4□□□□□ -0.75
CD44-209ENST00000433892 OR14K1Q8NGZ2 314 aa10.4□□□□□ -0.75
CD44-209ENST00000433892 MAFIPQ8WZ33 124 aa10.4□□□□□ -0.75
CD44-209ENST00000433892 RRNAD1Q96FB5 475 aaKnown RBP10.4□□□□□ -0.75
CD44-209ENST00000433892 PGAM5Q96HS1 289 aa10.4□□□□□ -0.75
CD44-209ENST00000433892 LYZL4Q96KX0 146 aa10.4□□□□□ -0.75
CD44-209ENST00000433892 CCDC74BQ96LY2 380 aa10.4□□□□□ -0.75
CD44-209ENST00000433892 RNF126Q9BV68 326 aa10.4□□□□□ -0.75
CD44-209ENST00000433892 FAM117AQ9C073 453 aa10.4□□□□□ -0.75
CD44-209ENST00000433892 OR10A2Q9H208 303 aa10.4□□□□□ -0.75
CD44-209ENST00000433892 ANAPC10Q9UM13 185 aa10.4□□□□□ -0.75
CD44-209ENST00000433892 PCDHB10Q9UN67 800 aa10.4□□□□□ -0.75
CD44-209ENST00000433892 CHCHD2Q9Y6H1 151 aaPredicted RBP10.4□□□□□ -0.75
CD44-209ENST00000433892 EML6Q6ZMW3 1958 aa10.39□□□□□ -0.75
CD44-209ENST00000433892 IGHV3-15A0A0B4J1V0 119 aa10.39□□□□□ -0.75
CD44-209ENST00000433892 LY6G6EA0A0G2JKS1 128 aa10.39□□□□□ -0.75
CD44-209ENST00000433892 H0YIZ8 118 aa10.39□□□□□ -0.75
CD44-209ENST00000433892 DKK1O94907 266 aa10.39□□□□□ -0.75
CD44-209ENST00000433892 HTR3BO95264 441 aa10.39□□□□□ -0.75
CD44-209ENST00000433892 AMY2BP19961 511 aa10.39□□□□□ -0.75
CD44-209ENST00000433892 SLC6A9P48067 706 aa10.39□□□□□ -0.75
CD44-209ENST00000433892 MC2RQ01718 297 aa10.39□□□□□ -0.75
CD44-209ENST00000433892 KISS1Q15726 138 aa10.39□□□□□ -0.75
CD44-209ENST00000433892 KCNMB1Q16558 191 aa10.39□□□□□ -0.75
CD44-209ENST00000433892 RSPO4Q2I0M5 234 aaPredicted RBP10.39□□□□□ -0.75
CD44-209ENST00000433892 PPP1R3BQ86XI6 285 aa10.39□□□□□ -0.75
CD44-209ENST00000433892 DTX1Q86Y01 620 aa10.39□□□□□ -0.75
CD44-209ENST00000433892 FADS6Q8N9I5 356 aa10.39□□□□□ -0.75
CD44-209ENST00000433892 BHLHE23Q8NDY6 225 aa10.39□□□□□ -0.75
CD44-209ENST00000433892 OR1S2Q8NGQ3 325 aa10.39□□□□□ -0.75
CD44-209ENST00000433892 OR5H2Q8NGV7 314 aa10.39□□□□□ -0.75
CD44-209ENST00000433892 PIK3IP1Q96FE7 263 aa10.39□□□□□ -0.75
CD44-209ENST00000433892 OCSTAMPQ9BR26 566 aa10.39□□□□□ -0.75
CD44-209ENST00000433892 URM1Q9BTM9 101 aaKnown RBP10.39□□□□□ -0.75
CD44-209ENST00000433892 NMES1Q9C002 83 aa10.39□□□□□ -0.75
CD44-209ENST00000433892 ASF1BQ9NVP2 202 aa10.39□□□□□ -0.75
CD44-209ENST00000433892 HDGFL3Q9Y3E1 203 aa10.39□□□□□ -0.75
CD44-209ENST00000433892 U3KQA8 63 aa10.39□□□□□ -0.75
CD44-209ENST00000433892 ARID1AO14497 2285 aa10.39□□□□□ -0.75
CD44-209ENST00000433892 A0A0B4J2A0 478 aa10.38□□□□□ -0.75
CD44-209ENST00000433892 ATP6V1G2-DDX39BF2Z307 99 aa10.38□□□□□ -0.75
CD44-209ENST00000433892 SIGLEC6O43699 453 aa10.38□□□□□ -0.75
CD44-209ENST00000433892 TLX3O43711 291 aaPredicted RBP10.38□□□□□ -0.75
CD44-209ENST00000433892 EIF1P41567 113 aaKnown RBP10.38□□□□□ -0.75
CD44-209ENST00000433892 GUCA1AP43080 201 aaPredicted RBP10.38□□□□□ -0.75
CD44-209ENST00000433892 PTGFRP43088 359 aa10.38□□□□□ -0.75
CD44-209ENST00000433892 AKR1C2P52895 323 aa10.38□□□□□ -0.75
CD44-209ENST00000433892 STARD6P59095 220 aa10.38□□□□□ -0.75
CD44-209ENST00000433892 GRB2P62993 217 aaKnown RBP10.38□□□□□ -0.75
CD44-209ENST00000433892 SUPT4H1P63272 117 aaKnown RBP10.38□□□□□ -0.75
CD44-209ENST00000433892 AKR1C1Q04828 323 aa10.38□□□□□ -0.75
CD44-209ENST00000433892 SDK2Q58EX2 2172 aa10.38□□□□□ -0.75
CD44-209ENST00000433892 PHYHD1Q5SRE7 291 aa10.38□□□□□ -0.75
CD44-209ENST00000433892 LRRC18Q8N456 261 aa10.38□□□□□ -0.75
CD44-209ENST00000433892 ZSCAN4Q8NAM6 433 aaPredicted RBP10.38□□□□□ -0.75
CD44-209ENST00000433892 OR13G1Q8NGZ3 307 aa10.38□□□□□ -0.75
CD44-209ENST00000433892 SSC4DQ8WTU2 575 aa10.38□□□□□ -0.75
CD44-209ENST00000433892 SLC25A43Q8WUT9 341 aaPredicted RBP10.38□□□□□ -0.75
CD44-209ENST00000433892 RTBDNQ9BSG5 229 aaPredicted RBP10.38□□□□□ -0.75
CD44-209ENST00000433892 ZNF160Q9HCG1 818 aa10.38□□□□□ -0.75
CD44-209ENST00000433892 OCIAD1Q9NX40 245 aa10.38□□□□□ -0.75
CD44-209ENST00000433892 C19orf25Q9UFG5 118 aaPredicted RBP10.38□□□□□ -0.75
CD44-209ENST00000433892 SHPKQ9UHJ6 478 aa10.38□□□□□ -0.75
CD44-209ENST00000433892 MYO7BQ6PIF6 2116 aa10.38□□□□□ -0.75
CD44-209ENST00000433892 TEX13DA0A0J9YY54 714 aaPredicted RBP10.38□□□□□ -0.75
CD44-209ENST00000433892 OR5H15A6NDH6 313 aa10.38□□□□□ -0.75
CD44-209ENST00000433892 STMND1H3BQB6 276 aa10.38□□□□□ -0.75
CD44-209ENST00000433892 SFT2D2O95562 160 aa10.38□□□□□ -0.75
CD44-209ENST00000433892 WDPCPO95876 746 aa10.38□□□□□ -0.75
CD44-209ENST00000433892 PLATP00750 562 aa10.38□□□□□ -0.75
CD44-209ENST00000433892 FAHP16930 419 aa10.38□□□□□ -0.75
CD44-209ENST00000433892 CTRB1P17538 263 aa10.38□□□□□ -0.75
CD44-209ENST00000433892 GLRA1P23415 457 aa10.38□□□□□ -0.75
CD44-209ENST00000433892 OR3A2P47893 321 aa10.38□□□□□ -0.75
CD44-209ENST00000433892 SNU13P55769 128 aaKnown RBP10.38□□□□□ -0.75
CD44-209ENST00000433892 SLC35A1P78382 337 aa10.38□□□□□ -0.75
CD44-209ENST00000433892 ECH1Q13011 328 aa10.38□□□□□ -0.75
CD44-209ENST00000433892 PNLIPRP3Q17RR3 467 aa10.38□□□□□ -0.75
CD44-209ENST00000433892 ANKRD55Q3KP44 614 aa10.38□□□□□ -0.75
CD44-209ENST00000433892 ACTBL2Q562R1 376 aa10.38□□□□□ -0.75
CD44-209ENST00000433892 CTRB2Q6GPI1 263 aa10.38□□□□□ -0.75
CD44-209ENST00000433892 CRIP3Q6Q6R5 217 aa10.38□□□□□ -0.75
CD44-209ENST00000433892 PNLDC1Q8NA58 520 aaKnown RBP10.38□□□□□ -0.75
CD44-209ENST00000433892 MARC2Q969Z3 335 aa10.38□□□□□ -0.75
CD44-209ENST00000433892 GNRHR2Q96P88 292 aa10.38□□□□□ -0.75
CD44-209ENST00000433892 ZNF385AQ96PM9 386 aaKnown RBP10.38□□□□□ -0.75
CD44-209ENST00000433892 PIGMQ9H3S5 423 aa10.38□□□□□ -0.75
CD44-209ENST00000433892 FLVCR1Q9Y5Y0 555 aa10.38□□□□□ -0.75
CD44-209ENST00000433892 TRBV6-7A0A0A0MS04 114 aa10.37□□□□□ -0.75
CD44-209ENST00000433892 G3V3Y1 287 aa10.37□□□□□ -0.75
CD44-209ENST00000433892 K7ESF4 209 aa10.37□□□□□ -0.75
CD44-209ENST00000433892 DNASE2O00115 360 aaPredicted RBP10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms