RNA–Protein interactions for RNA: ENST00000427110.6

PTPRC-208, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best)

Gene PTPRC, Length 264 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-208ENST00000427110 CISD3P0C7P0 127 aa1.46□□□□□ -2.18
PTPRC-208ENST00000427110 ZNF806P0C7X5 589 aa1.46□□□□□ -2.18
PTPRC-208ENST00000427110 CT45A6P0DMU7 189 aa1.46□□□□□ -2.18
PTPRC-208ENST00000427110 CT45A5P0DMU8 189 aa1.46□□□□□ -2.18
PTPRC-208ENST00000427110 CT45A7P0DMV0 189 aa1.46□□□□□ -2.18
PTPRC-208ENST00000427110 CASP1P29466 404 aa1.46□□□□□ -2.18
PTPRC-208ENST00000427110 CASQ1P31415 396 aa1.46□□□□□ -2.18
PTPRC-208ENST00000427110 SSTR5P35346 364 aa1.46□□□□□ -2.18
PTPRC-208ENST00000427110 ATP5OP48047 213 aa1.46□□□□□ -2.18
PTPRC-208ENST00000427110 MRPL19P49406 292 aaKnown RBP1.46□□□□□ -2.18
PTPRC-208ENST00000427110 RAB7AP51149 207 aa1.46□□□□□ -2.18
PTPRC-208ENST00000427110 CDKN2DP55273 166 aa1.46□□□□□ -2.18
PTPRC-208ENST00000427110 GNG11P61952 73 aa1.46□□□□□ -2.18
PTPRC-208ENST00000427110 PPP1CBP62140 327 aa1.46□□□□□ -2.18
PTPRC-208ENST00000427110 ESRRGP62508 458 aa1.46□□□□□ -2.18
PTPRC-208ENST00000427110 TRAM2Q15035 370 aa1.46□□□□□ -2.18
PTPRC-208ENST00000427110 PON2Q15165 354 aa1.46□□□□□ -2.18
PTPRC-208ENST00000427110 ZCWPW2Q504Y3 356 aa1.46□□□□□ -2.18
PTPRC-208ENST00000427110 C5orf47Q569G3 176 aa1.46□□□□□ -2.18
PTPRC-208ENST00000427110 CT45A1Q5HYN5 189 aa1.46□□□□□ -2.18
PTPRC-208ENST00000427110 UBE2UQ5VVX9 321 aa1.46□□□□□ -2.18
PTPRC-208ENST00000427110 WDR59Q6PJI9 974 aa1.46□□□□□ -2.18
PTPRC-208ENST00000427110 PP632Q6XCG6 107 aa1.46□□□□□ -2.18
PTPRC-208ENST00000427110 BZW1Q7L1Q6 419 aaKnown RBP1.46□□□□□ -2.18
PTPRC-208ENST00000427110 SLC35F6Q8N357 371 aa1.46□□□□□ -2.18
PTPRC-208ENST00000427110 CBR4Q8N4T8 237 aa1.46□□□□□ -2.18
PTPRC-208ENST00000427110 C15orf56Q8N910 161 aa1.46□□□□□ -2.18
PTPRC-208ENST00000427110 SNX31Q8N9S9 440 aa1.46□□□□□ -2.18
PTPRC-208ENST00000427110 TTC29Q8NA56 475 aaPredicted RBP1.46□□□□□ -2.18
PTPRC-208ENST00000427110 CHST4Q8NCG5 386 aa1.46□□□□□ -2.18
PTPRC-208ENST00000427110 BBOF1Q8ND07 529 aa1.46□□□□□ -2.18
PTPRC-208ENST00000427110 MNS1Q8NEH6 495 aa1.46□□□□□ -2.18
PTPRC-208ENST00000427110 CT45A3Q8NHU0 189 aa1.46□□□□□ -2.18
PTPRC-208ENST00000427110 OR51E1Q8TCB6 317 aa1.46□□□□□ -2.18
PTPRC-208ENST00000427110 NELFBQ8WX92 580 aa1.46□□□□□ -2.18
PTPRC-208ENST00000427110 SEH1LQ96EE3 360 aa1.46□□□□□ -2.18
PTPRC-208ENST00000427110 DYNLL2Q96FJ2 89 aa1.46□□□□□ -2.18
PTPRC-208ENST00000427110 ZNF681Q96N22 645 aa1.46□□□□□ -2.18
PTPRC-208ENST00000427110 XPO6Q96QU8 1125 aaKnown RBP1.46□□□□□ -2.18
PTPRC-208ENST00000427110 TGS1Q96RS0 853 aaKnown RBP1.46□□□□□ -2.18
PTPRC-208ENST00000427110 CAMK2N2Q96S95 79 aa1.46□□□□□ -2.18
PTPRC-208ENST00000427110 NAPGQ99747 312 aaPredicted RBP1.46□□□□□ -2.18
PTPRC-208ENST00000427110 C11orf70Q9BRQ4 267 aa1.46□□□□□ -2.18
PTPRC-208ENST00000427110 COA1Q9GZY4 146 aa1.46□□□□□ -2.18
PTPRC-208ENST00000427110 DEFB129Q9H1M3 183 aa1.46□□□□□ -2.18
PTPRC-208ENST00000427110 BLZF1Q9H2G9 400 aa1.46□□□□□ -2.18
PTPRC-208ENST00000427110 SAV1Q9H4B6 383 aaPredicted RBP1.46□□□□□ -2.18
PTPRC-208ENST00000427110 GEMIN7Q9H840 131 aaKnown RBP1.46□□□□□ -2.18
PTPRC-208ENST00000427110 TMEM165Q9HC07 324 aa1.46□□□□□ -2.18
PTPRC-208ENST00000427110 WFDC1Q9HC57 220 aa1.46□□□□□ -2.18
PTPRC-208ENST00000427110 ZNHIT6Q9NWK9 470 aaKnown RBP1.46□□□□□ -2.18
PTPRC-208ENST00000427110 ZNF282Q9UDV7 671 aaPredicted RBP1.46□□□□□ -2.18
PTPRC-208ENST00000427110 V9GYY5 206 aaPredicted RBP1.46□□□□□ -2.18
PTPRC-208ENST00000427110 MYO10Q9HD67 2058 aa1.46□□□□□ -2.18
PTPRC-208ENST00000427110 SBF1O95248 1867 aa1.46□□□□□ -2.18
PTPRC-208ENST00000427110 EP400Q96L91 3159 aa1.45□□□□□ -2.18
PTPRC-208ENST00000427110 IGSF9BQ9UPX0 1349 aa1.45□□□□□ -2.18
PTPRC-208ENST00000427110 TRIP11Q15643 1979 aa1.45□□□□□ -2.18
PTPRC-208ENST00000427110 PAPPA2Q9BXP8 1791 aa1.45□□□□□ -2.18
PTPRC-208ENST00000427110 TRAV19A0A0A6YYK7 116 aa1.45□□□□□ -2.18
PTPRC-208ENST00000427110 TRBV9A0A0B4J1U6 114 aa1.45□□□□□ -2.18
PTPRC-208ENST00000427110 SYCE1LA8MT33 242 aa1.45□□□□□ -2.18
PTPRC-208ENST00000427110 ZNF705GA8MUZ8 300 aaPredicted RBP1.45□□□□□ -2.18
PTPRC-208ENST00000427110 BTNL10A8MVZ5 291 aa1.45□□□□□ -2.18
PTPRC-208ENST00000427110 TEX46H3BTG2 121 aa1.45□□□□□ -2.18
PTPRC-208ENST00000427110 DNALI1O14645 258 aaPredicted RBP1.45□□□□□ -2.18
PTPRC-208ENST00000427110 SCAMP2O15127 329 aaKnown RBP1.45□□□□□ -2.18
PTPRC-208ENST00000427110 SLC37A4O43826 429 aa1.45□□□□□ -2.18
PTPRC-208ENST00000427110 FLOT1O75955 427 aa1.45□□□□□ -2.18
PTPRC-208ENST00000427110 CCNB2O95067 398 aa1.45□□□□□ -2.18
PTPRC-208ENST00000427110 WISP3O95389 354 aaPredicted RBP1.45□□□□□ -2.18
PTPRC-208ENST00000427110 TDP2O95551 362 aa1.45□□□□□ -2.18
PTPRC-208ENST00000427110 LSM8O95777 96 aaKnown RBP1.45□□□□□ -2.18
PTPRC-208ENST00000427110 ERCC1P07992 297 aaPredicted RBP1.45□□□□□ -2.18
PTPRC-208ENST00000427110 GOLGA8HP0CJ92 632 aa1.45□□□□□ -2.18
PTPRC-208ENST00000427110 CD37P11049 281 aa1.45□□□□□ -2.18
PTPRC-208ENST00000427110 ERGP11308 486 aa1.45□□□□□ -2.18
PTPRC-208ENST00000427110 TCP1P17987 556 aaKnown RBP1.45□□□□□ -2.18
PTPRC-208ENST00000427110 RAB3AP20336 220 aa1.45□□□□□ -2.18
PTPRC-208ENST00000427110 IL32P24001 234 aa1.45□□□□□ -2.18
PTPRC-208ENST00000427110 STOMP27105 288 aa1.45□□□□□ -2.18
PTPRC-208ENST00000427110 OR1E1P30953 314 aa1.45□□□□□ -2.18
PTPRC-208ENST00000427110 CCT6AP40227 531 aaKnown RBP1.45□□□□□ -2.18
PTPRC-208ENST00000427110 CCNA1P78396 465 aa1.45□□□□□ -2.18
PTPRC-208ENST00000427110 IFT88Q13099 833 aa1.45□□□□□ -2.18
PTPRC-208ENST00000427110 ART3Q13508 389 aa1.45□□□□□ -2.18
PTPRC-208ENST00000427110 ZNF266Q14584 549 aa1.45□□□□□ -2.18
PTPRC-208ENST00000427110 PGGHGQ32M88 737 aa1.45□□□□□ -2.18
PTPRC-208ENST00000427110 HSP90AA4PQ58FG1 418 aa1.45□□□□□ -2.18
PTPRC-208ENST00000427110 TCEAL5Q5H9L2 206 aa1.45□□□□□ -2.18
PTPRC-208ENST00000427110 ZNF684Q5T5D7 378 aa1.45□□□□□ -2.18
PTPRC-208ENST00000427110 TPTE2P1Q5T6R2 138 aa1.45□□□□□ -2.18
PTPRC-208ENST00000427110 FKBP1CQ5VVH2 108 aa1.45□□□□□ -2.18
PTPRC-208ENST00000427110 APOBEC3HQ6NTF7 200 aaKnown RBP1.45□□□□□ -2.18
PTPRC-208ENST00000427110 MBOAT2Q6ZWT7 520 aa1.45□□□□□ -2.18
PTPRC-208ENST00000427110 SMIM5Q71RC9 77 aa1.45□□□□□ -2.18
PTPRC-208ENST00000427110 SSX9Q7RTT3 188 aa1.45□□□□□ -2.18
PTPRC-208ENST00000427110 NKAIN4Q8IVV8 208 aa1.45□□□□□ -2.18
PTPRC-208ENST00000427110 UBALD2Q8IYN6 164 aa1.45□□□□□ -2.18
PTPRC-208ENST00000427110 FAM71AQ8IYT1 594 aa1.45□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms