RNA–Protein interactions for RNA: ENST00000424143.5

C9orf3-204, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 1,605 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-204ENST00000424143 OR10C1Q96KK4 312 aa13.45□□□□□ -0.26
C9orf3-204ENST00000424143 TAAR9Q96RI9 348 aa13.45□□□□□ -0.26
C9orf3-204ENST00000424143 NICN1Q9BSH3 213 aa13.45□□□□□ -0.26
C9orf3-204ENST00000424143 TGIF2Q9GZN2 237 aa13.45□□□□□ -0.26
C9orf3-204ENST00000424143 METTL8Q9H825 291 aaKnown RBP13.45□□□□□ -0.26
C9orf3-204ENST00000424143 STARD10Q9Y365 291 aa13.45□□□□□ -0.26
C9orf3-204ENST00000424143 LHFPL6Q9Y693 200 aa13.45□□□□□ -0.26
C9orf3-204ENST00000424143 CDC14CA4D256 554 aa13.44□□□□□ -0.26
C9orf3-204ENST00000424143 PCP4L1A6NKN8 68 aa13.44□□□□□ -0.26
C9orf3-204ENST00000424143 VSTM2BA6NLU5 285 aa13.44□□□□□ -0.26
C9orf3-204ENST00000424143 LINC01565O15544 149 aa13.44□□□□□ -0.26
C9orf3-204ENST00000424143 ADAP1O75689 374 aa13.44□□□□□ -0.26
C9orf3-204ENST00000424143 CTSDP07339 412 aaPredicted RBP13.44□□□□□ -0.26
C9orf3-204ENST00000424143 SFTA3P0C7M3 94 aa13.44□□□□□ -0.26
C9orf3-204ENST00000424143 IL11P20809 199 aa13.44□□□□□ -0.26
C9orf3-204ENST00000424143 PTAFRP25105 342 aa13.44□□□□□ -0.26
C9orf3-204ENST00000424143 THBS4P35443 961 aa13.44□□□□□ -0.26
C9orf3-204ENST00000424143 EFNA3P52797 238 aa13.44□□□□□ -0.26
C9orf3-204ENST00000424143 HYAL4Q2M3T9 481 aa13.44□□□□□ -0.26
C9orf3-204ENST00000424143 FAM76BQ5HYJ3 339 aa13.44□□□□□ -0.26
C9orf3-204ENST00000424143 D2HGDHQ8N465 521 aa13.44□□□□□ -0.26
C9orf3-204ENST00000424143 TMEM104Q8NE00 496 aa13.44□□□□□ -0.26
C9orf3-204ENST00000424143 NOXO1Q8NFA2 376 aa13.44□□□□□ -0.26
C9orf3-204ENST00000424143 OR2I1PQ8NGU4 316 aa13.44□□□□□ -0.26
C9orf3-204ENST00000424143 OR51E1Q8TCB6 317 aa13.44□□□□□ -0.26
C9orf3-204ENST00000424143 MRPL38Q96DV4 380 aaKnown RBP13.44□□□□□ -0.26
C9orf3-204ENST00000424143 TCEAL7Q9BRU2 100 aa13.44□□□□□ -0.26
C9orf3-204ENST00000424143 FOXQ1Q9C009 403 aa13.44□□□□□ -0.26
C9orf3-204ENST00000424143 ZNF768Q9H5H4 540 aaKnown RBP13.44□□□□□ -0.26
C9orf3-204ENST00000424143 B3GAT1Q9P2W7 334 aa13.44□□□□□ -0.26
C9orf3-204ENST00000424143 C14orf166Q9Y224 244 aaKnown RBP13.44□□□□□ -0.26
C9orf3-204ENST00000424143 PCDHGA1Q9Y5H4 931 aa13.44□□□□□ -0.26
C9orf3-204ENST00000424143 EXPH5Q8NEV8 1989 aa13.43□□□□□ -0.26
C9orf3-204ENST00000424143 A0A1B0GW64 132 aa13.43□□□□□ -0.26
C9orf3-204ENST00000424143 C17orf51A8MQB3 221 aa13.43□□□□□ -0.26
C9orf3-204ENST00000424143 RHPN2P1A8MT19 583 aa13.43□□□□□ -0.26
C9orf3-204ENST00000424143 LRP3O75074 770 aa13.43□□□□□ -0.26
C9orf3-204ENST00000424143 RAD51DO75771 328 aa13.43□□□□□ -0.26
C9orf3-204ENST00000424143 IFNA2P01563 188 aa13.43□□□□□ -0.26
C9orf3-204ENST00000424143 IGHG1P01857 330 aa13.43□□□□□ -0.26
C9orf3-204ENST00000424143 MT-ND4LP03901 98 aa13.43□□□□□ -0.26
C9orf3-204ENST00000424143 NR2C1P13056 603 aa13.43□□□□□ -0.26
C9orf3-204ENST00000424143 ZNF708P17019 499 aa13.43□□□□□ -0.26
C9orf3-204ENST00000424143 ZNF17P17021 662 aa13.43□□□□□ -0.26
C9orf3-204ENST00000424143 BCKDHBP21953 392 aa13.43□□□□□ -0.26
C9orf3-204ENST00000424143 LPAR6P43657 344 aa13.43□□□□□ -0.26
C9orf3-204ENST00000424143 BIDP55957 195 aa13.43□□□□□ -0.26
C9orf3-204ENST00000424143 RNF4P78317 190 aa13.43□□□□□ -0.26
C9orf3-204ENST00000424143 SQSTM1Q13501 440 aa13.43□□□□□ -0.26
C9orf3-204ENST00000424143 SLC9A3R2Q15599 337 aa13.43□□□□□ -0.26
C9orf3-204ENST00000424143 HIST3H3Q16695 136 aa13.43□□□□□ -0.26
C9orf3-204ENST00000424143 TMPPEQ6ZT21 453 aa13.43□□□□□ -0.26
C9orf3-204ENST00000424143 KMT5CQ86Y97 462 aa13.43□□□□□ -0.26
C9orf3-204ENST00000424143 WDFY1Q8IWB7 410 aa13.43□□□□□ -0.26
C9orf3-204ENST00000424143 ZNF561Q8N587 486 aa13.43□□□□□ -0.26
C9orf3-204ENST00000424143 PNLDC1Q8NA58 520 aaKnown RBP13.43□□□□□ -0.26
C9orf3-204ENST00000424143 OR8B12Q8NGG6 310 aa13.43□□□□□ -0.26
C9orf3-204ENST00000424143 OR14K1Q8NGZ2 314 aa13.43□□□□□ -0.26
C9orf3-204ENST00000424143 OR6X1Q8NH79 312 aa13.43□□□□□ -0.26
C9orf3-204ENST00000424143 ARHGAP5-AS1Q96IT6 56 aa13.43□□□□□ -0.26
C9orf3-204ENST00000424143 KIRREL1Q96J84 757 aa13.43□□□□□ -0.26
C9orf3-204ENST00000424143 ARL5BQ96KC2 179 aa13.43□□□□□ -0.26
C9orf3-204ENST00000424143 ADAT1Q9BUB4 502 aaKnown RBP13.43□□□□□ -0.26
C9orf3-204ENST00000424143 VN1R1Q9GZP7 353 aa13.43□□□□□ -0.26
C9orf3-204ENST00000424143 HRH4Q9H3N8 390 aa13.43□□□□□ -0.26
C9orf3-204ENST00000424143 SMDT1Q9H4I9 107 aa13.43□□□□□ -0.26
C9orf3-204ENST00000424143 CACFD1Q9UGQ2 172 aa13.43□□□□□ -0.26
C9orf3-204ENST00000424143 EDARQ9UNE0 448 aa13.43□□□□□ -0.26
C9orf3-204ENST00000424143 PMS2P1A4D2B8 440 aa13.42□□□□□ -0.26
C9orf3-204ENST00000424143 C5orf52A6NGY3 159 aa13.42□□□□□ -0.26
C9orf3-204ENST00000424143 C1orf196B1AJZ1 125 aa13.42□□□□□ -0.26
C9orf3-204ENST00000424143 UBE2CO00762 179 aa13.42□□□□□ -0.26
C9orf3-204ENST00000424143 GMFGO60234 142 aa13.42□□□□□ -0.26
C9orf3-204ENST00000424143 ZNF354AO60765 605 aaPredicted RBP13.42□□□□□ -0.26
C9orf3-204ENST00000424143 MED6O75586 246 aa13.42□□□□□ -0.26
C9orf3-204ENST00000424143 DEDDO75618 318 aa13.42□□□□□ -0.26
C9orf3-204ENST00000424143 SEC11BP0C7V7 166 aa13.42□□□□□ -0.26
C9orf3-204ENST00000424143 PGA4P0DJD7 388 aa13.42□□□□□ -0.26
C9orf3-204ENST00000424143 PGA3P0DJD8 388 aa13.42□□□□□ -0.26
C9orf3-204ENST00000424143 GIMD1P0DJR0 217 aa13.42□□□□□ -0.26
C9orf3-204ENST00000424143 RCC1P18754 421 aaPredicted RBP13.42□□□□□ -0.26
C9orf3-204ENST00000424143 MAS1LP35410 378 aa13.42□□□□□ -0.26
C9orf3-204ENST00000424143 RAB5CP51148 216 aa13.42□□□□□ -0.26
C9orf3-204ENST00000424143 GABREP78334 506 aa13.42□□□□□ -0.26
C9orf3-204ENST00000424143 ARFRP1Q13795 201 aa13.42□□□□□ -0.26
C9orf3-204ENST00000424143 RBM39Q14498 530 aaKnown RBP13.42□□□□□ -0.26
C9orf3-204ENST00000424143 HABP2Q14520 560 aaPredicted RBP13.42□□□□□ -0.26
C9orf3-204ENST00000424143 SMCO1Q147U7 214 aa13.42□□□□□ -0.26
C9orf3-204ENST00000424143 RPL7L1Q6DKI1 246 aaKnown RBP13.42□□□□□ -0.26
C9orf3-204ENST00000424143 ZDHHC19Q8WVZ1 309 aaPredicted RBP13.42□□□□□ -0.26
C9orf3-204ENST00000424143 MALSU1Q96EH3 234 aa13.42□□□□□ -0.26
C9orf3-204ENST00000424143 C5orf34Q96MH7 638 aa13.42□□□□□ -0.26
C9orf3-204ENST00000424143 PNRC2Q9NPJ4 139 aaKnown RBP13.42□□□□□ -0.26
C9orf3-204ENST00000424143 GPR84Q9NQS5 396 aa13.42□□□□□ -0.26
C9orf3-204ENST00000424143 ADAMTS9Q9P2N4 1935 aa13.42□□□□□ -0.26
C9orf3-204ENST00000424143 A0A0U1RQV5 110 aa13.42□□□□□ -0.26
C9orf3-204ENST00000424143 A0A1B0GX78 115 aa13.42□□□□□ -0.26
C9orf3-204ENST00000424143 AGAP20933 346 aa13.42□□□□□ -0.26
C9orf3-204ENST00000424143 RPL12P30050 165 aaKnown RBP13.42□□□□□ -0.26
C9orf3-204ENST00000424143 RBMXP38159 391 aaKnown RBP13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms