RNA–Protein interactions for RNA: ENST00000423636.6

PTPRN-204, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPRN, Length 3,313 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-204ENST00000423636 CSMD1Q96PZ7 3565 aa10.46□□□□□ -0.74
PTPRN-204ENST00000423636 C5orf51A6NDU8 294 aa10.46□□□□□ -0.74
PTPRN-204ENST00000423636 LEUTXA8MZ59 168 aa10.46□□□□□ -0.74
PTPRN-204ENST00000423636 TLX3O43711 291 aaPredicted RBP10.46□□□□□ -0.74
PTPRN-204ENST00000423636 HLA-HP01893 362 aa10.46□□□□□ -0.74
PTPRN-204ENST00000423636 PPP3CBP16298 524 aa10.46□□□□□ -0.74
PTPRN-204ENST00000423636 MSR1P21757 451 aa10.46□□□□□ -0.74
PTPRN-204ENST00000423636 NFYAP23511 347 aaPredicted RBP10.46□□□□□ -0.74
PTPRN-204ENST00000423636 NDUFA5Q16718 116 aa10.46□□□□□ -0.74
PTPRN-204ENST00000423636 CLEC9AQ6UXN8 241 aa10.46□□□□□ -0.74
PTPRN-204ENST00000423636 TMEM200AQ86VY9 491 aa10.46□□□□□ -0.74
PTPRN-204ENST00000423636 GTPBP8Q8N3Z3 284 aaPredicted RBP10.46□□□□□ -0.74
PTPRN-204ENST00000423636 IL22RA1Q8N6P7 574 aa10.46□□□□□ -0.74
PTPRN-204ENST00000423636 RAB3CQ96E17 227 aa10.46□□□□□ -0.74
PTPRN-204ENST00000423636 ACTR6Q9GZN1 396 aa10.46□□□□□ -0.74
PTPRN-204ENST00000423636 FN3KRPQ9HA64 309 aa10.46□□□□□ -0.74
PTPRN-204ENST00000423636 F5H5P2 479 aa10.45□□□□□ -0.74
PTPRN-204ENST00000423636 SULT1B1O43704 296 aa10.45□□□□□ -0.74
PTPRN-204ENST00000423636 EDN3P14138 238 aa10.45□□□□□ -0.74
PTPRN-204ENST00000423636 PGAM2P15259 253 aa10.45□□□□□ -0.74
PTPRN-204ENST00000423636 MSX1P28360 303 aa10.45□□□□□ -0.74
PTPRN-204ENST00000423636 HTR5AP47898 357 aa10.45□□□□□ -0.74
PTPRN-204ENST00000423636 NOVA1P51513 510 aaKnown RBP10.45□□□□□ -0.74
PTPRN-204ENST00000423636 DSCR4P56555 118 aaPredicted RBP10.45□□□□□ -0.74
PTPRN-204ENST00000423636 ZNF260Q3ZCT1 412 aa10.45□□□□□ -0.74
PTPRN-204ENST00000423636 AAED1Q7RTV5 226 aa10.45□□□□□ -0.74
PTPRN-204ENST00000423636 ZNF700Q9H0M5 742 aa10.45□□□□□ -0.74
PTPRN-204ENST00000423636 LPAR5Q9H1C0 372 aa10.45□□□□□ -0.74
PTPRN-204ENST00000423636 GSKIPQ9P0R6 139 aa10.45□□□□□ -0.74
PTPRN-204ENST00000423636 CYB561P49447 251 aa10.45□□□□□ -0.74
PTPRN-204ENST00000423636 AKR1C2P52895 323 aa10.45□□□□□ -0.74
PTPRN-204ENST00000423636 ATP1B3P54709 279 aa10.45□□□□□ -0.74
PTPRN-204ENST00000423636 SUMO3P55854 103 aaPredicted RBP10.45□□□□□ -0.74
PTPRN-204ENST00000423636 TAS2R19P59542 299 aa10.45□□□□□ -0.74
PTPRN-204ENST00000423636 IL13RA1P78552 427 aa10.45□□□□□ -0.74
PTPRN-204ENST00000423636 AKR1C1Q04828 323 aa10.45□□□□□ -0.74
PTPRN-204ENST00000423636 HLXQ14774 488 aaPredicted RBP10.45□□□□□ -0.74
PTPRN-204ENST00000423636 MICBQ29980 383 aa10.45□□□□□ -0.74
PTPRN-204ENST00000423636 THOC7Q6I9Y2 204 aaKnown RBP10.45□□□□□ -0.74
PTPRN-204ENST00000423636 OR4K15Q8NH41 348 aa10.45□□□□□ -0.74
PTPRN-204ENST00000423636 PAQR8Q8TEZ7 354 aa10.45□□□□□ -0.74
PTPRN-204ENST00000423636 PIGCQ92535 297 aa10.45□□□□□ -0.74
PTPRN-204ENST00000423636 ZNF75AQ96N20 296 aa10.45□□□□□ -0.74
PTPRN-204ENST00000423636 PARPBPQ9NWS1 579 aa10.45□□□□□ -0.74
PTPRN-204ENST00000423636 CRIM1Q9NZV1 1036 aa10.45□□□□□ -0.74
PTPRN-204ENST00000423636 OPN4Q9UHM6 478 aa10.45□□□□□ -0.74
PTPRN-204ENST00000423636 PCDHGA1Q9Y5H4 931 aa10.45□□□□□ -0.74
PTPRN-204ENST00000423636 PKDREJQ9NTG1 2253 aa10.45□□□□□ -0.74
PTPRN-204ENST00000423636 ZNF587BE7ETH6 402 aa10.45□□□□□ -0.74
PTPRN-204ENST00000423636 TGM6O95932 706 aa10.45□□□□□ -0.74
PTPRN-204ENST00000423636 NAGAP17050 411 aa10.45□□□□□ -0.74
PTPRN-204ENST00000423636 GLRA1P23415 457 aa10.45□□□□□ -0.74
PTPRN-204ENST00000423636 SPATA46Q5T0L3 261 aa10.45□□□□□ -0.74
PTPRN-204ENST00000423636 COMMD7Q86VX2 200 aa10.45□□□□□ -0.74
PTPRN-204ENST00000423636 GPR137Q96N19 417 aa10.45□□□□□ -0.74
PTPRN-204ENST00000423636 FAAP24Q9BTP7 215 aa10.45□□□□□ -0.74
PTPRN-204ENST00000423636 ANGPTL4Q9BY76 406 aa10.45□□□□□ -0.74
PTPRN-204ENST00000423636 MS4A7Q9GZW8 240 aaPredicted RBP10.45□□□□□ -0.74
PTPRN-204ENST00000423636 SLC26A1Q9H2B4 701 aa10.45□□□□□ -0.74
PTPRN-204ENST00000423636 ASH1LQ9NR48 2969 aaKnown RBP10.44□□□□□ -0.74
PTPRN-204ENST00000423636 CDC14BO60729 498 aa10.44□□□□□ -0.74
PTPRN-204ENST00000423636 TPOP07202 933 aa10.44□□□□□ -0.74
PTPRN-204ENST00000423636 ZNF735P0CB33 412 aa10.44□□□□□ -0.74
PTPRN-204ENST00000423636 DUSP3P51452 185 aaPredicted RBP10.44□□□□□ -0.74
PTPRN-204ENST00000423636 MTCP1P56278 107 aa10.44□□□□□ -0.74
PTPRN-204ENST00000423636 PIGYQ3MUY2 71 aa10.44□□□□□ -0.74
PTPRN-204ENST00000423636 TMEM17Q86X19 198 aa10.44□□□□□ -0.74
PTPRN-204ENST00000423636 C12orf45Q8N5I9 185 aaPredicted RBP10.44□□□□□ -0.74
PTPRN-204ENST00000423636 OR10R2Q8NGX6 335 aa10.44□□□□□ -0.74
PTPRN-204ENST00000423636 UBALD1Q8TB05 177 aa10.44□□□□□ -0.74
PTPRN-204ENST00000423636 S100A13Q99584 98 aa10.44□□□□□ -0.74
PTPRN-204ENST00000423636 HDGFL3Q9Y3E1 203 aa10.44□□□□□ -0.74
PTPRN-204ENST00000423636 A0A1W2PNV4 684 aa10.44□□□□□ -0.74
PTPRN-204ENST00000423636 LRRC3CA6NJW4 275 aa10.44□□□□□ -0.74
PTPRN-204ENST00000423636 CBR3O75828 277 aa10.44□□□□□ -0.74
PTPRN-204ENST00000423636 TNFSF15O95150 251 aa10.44□□□□□ -0.74
PTPRN-204ENST00000423636 CD34P28906 385 aa10.44□□□□□ -0.74
PTPRN-204ENST00000423636 EIF1P41567 113 aaKnown RBP10.44□□□□□ -0.74
PTPRN-204ENST00000423636 TSC22D1Q15714 1073 aa10.44□□□□□ -0.74
PTPRN-204ENST00000423636 EXT1Q16394 746 aa10.44□□□□□ -0.74
PTPRN-204ENST00000423636 PCK2Q16822 640 aa10.44□□□□□ -0.74
PTPRN-204ENST00000423636 TSPO2Q5TGU0 170 aa10.44□□□□□ -0.74
PTPRN-204ENST00000423636 MYPOPQ86VE0 399 aaPredicted RBP10.44□□□□□ -0.74
PTPRN-204ENST00000423636 TUSC5Q8IXB3 177 aa10.44□□□□□ -0.74
PTPRN-204ENST00000423636 PNLDC1Q8NA58 520 aaKnown RBP10.44□□□□□ -0.74
PTPRN-204ENST00000423636 DTWD2Q8NBA8 298 aa10.44□□□□□ -0.74
PTPRN-204ENST00000423636 TOMM40LQ969M1 308 aa10.44□□□□□ -0.74
PTPRN-204ENST00000423636 SGK3Q96BR1 496 aa10.44□□□□□ -0.74
PTPRN-204ENST00000423636 C7orf50Q9BRJ6 194 aaKnown RBP10.44□□□□□ -0.74
PTPRN-204ENST00000423636 WDR13Q9H1Z4 485 aa10.44□□□□□ -0.74
PTPRN-204ENST00000423636 SGCEO43556 437 aa10.43□□□□□ -0.74
PTPRN-204ENST00000423636 HOXB5P09067 269 aa10.43□□□□□ -0.74
PTPRN-204ENST00000423636 MGMTP16455 207 aa10.43□□□□□ -0.74
PTPRN-204ENST00000423636 FXYD4P59646 89 aa10.43□□□□□ -0.74
PTPRN-204ENST00000423636 ACTBP60709 375 aa10.43□□□□□ -0.74
PTPRN-204ENST00000423636 ACTG1P63261 375 aa10.43□□□□□ -0.74
PTPRN-204ENST00000423636 H3F3AP84243 136 aa10.43□□□□□ -0.74
PTPRN-204ENST00000423636 C5orf46Q6UWT4 87 aa10.43□□□□□ -0.74
PTPRN-204ENST00000423636 PSMF1Q92530 271 aa10.43□□□□□ -0.74
PTPRN-204ENST00000423636 NABP1Q96AH0 204 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms