RNA–Protein interactions for RNA: ENST00000423635.5

CHCHD3-202, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 1 (best)

Gene CHCHD3, Length 1,310 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-202ENST00000423635 NOS3P29474 1203 aa13.56□□□□□ -0.24
CHCHD3-202ENST00000423635 GSK3BP49841 420 aa13.56□□□□□ -0.24
CHCHD3-202ENST00000423635 CSNK2BP67870 215 aa13.56□□□□□ -0.24
CHCHD3-202ENST00000423635 HABP2Q14520 560 aaPredicted RBP13.56□□□□□ -0.24
CHCHD3-202ENST00000423635 DGUOKQ16854 277 aa13.56□□□□□ -0.24
CHCHD3-202ENST00000423635 ZBTB37Q5TC79 503 aa13.56□□□□□ -0.24
CHCHD3-202ENST00000423635 LNX2Q8N448 690 aa13.56□□□□□ -0.24
CHCHD3-202ENST00000423635 CYB561A3Q8NBI2 242 aa13.56□□□□□ -0.24
CHCHD3-202ENST00000423635 GAFA1Q96PS6 74 aa13.56□□□□□ -0.24
CHCHD3-202ENST00000423635 RAB3IPQ96QF0 476 aaPredicted RBP13.56□□□□□ -0.24
CHCHD3-202ENST00000423635 TMEM120AQ9BXJ8 343 aa13.56□□□□□ -0.24
CHCHD3-202ENST00000423635 CDCA4Q9BXL8 241 aa13.56□□□□□ -0.24
CHCHD3-202ENST00000423635 LOC100653049A0A140TA62 436 aa13.55□□□□□ -0.24
CHCHD3-202ENST00000423635 A0A1W2PQ09 198 aa13.55□□□□□ -0.24
CHCHD3-202ENST00000423635 OR6C68A6NDL8 312 aa13.55□□□□□ -0.24
CHCHD3-202ENST00000423635 BBIP1A8MTZ0 92 aa13.55□□□□□ -0.24
CHCHD3-202ENST00000423635 MRASO14807 208 aa13.55□□□□□ -0.24
CHCHD3-202ENST00000423635 XRCC2O43543 280 aa13.55□□□□□ -0.24
CHCHD3-202ENST00000423635 KRT34O76011 436 aa13.55□□□□□ -0.24
CHCHD3-202ENST00000423635 ZNF682O95780 498 aa13.55□□□□□ -0.24
CHCHD3-202ENST00000423635 ZNF823P16415 610 aa13.55□□□□□ -0.24
CHCHD3-202ENST00000423635 FAM3AP98173 230 aa13.55□□□□□ -0.24
CHCHD3-202ENST00000423635 FKBP9P1Q75LS8 142 aa13.55□□□□□ -0.24
CHCHD3-202ENST00000423635 CYP4Z1Q86W10 505 aa13.55□□□□□ -0.24
CHCHD3-202ENST00000423635 OR10Z1Q8NGY1 313 aa13.55□□□□□ -0.24
CHCHD3-202ENST00000423635 OR4K13Q8NH42 304 aa13.55□□□□□ -0.24
CHCHD3-202ENST00000423635 ANGPTL6Q8NI99 470 aa13.55□□□□□ -0.24
CHCHD3-202ENST00000423635 DDOQ99489 341 aa13.55□□□□□ -0.24
CHCHD3-202ENST00000423635 NKX3-1Q99801 234 aaPredicted RBP13.55□□□□□ -0.24
CHCHD3-202ENST00000423635 ZNF391Q9UJN7 358 aa13.55□□□□□ -0.24
CHCHD3-202ENST00000423635 ENPP4Q9Y6X5 453 aa13.55□□□□□ -0.24
CHCHD3-202ENST00000423635 WI2-2373I1.2A0A1W2PRP0 233 aa13.54□□□□□ -0.24
CHCHD3-202ENST00000423635 VGLL3A8MV65 326 aa13.54□□□□□ -0.24
CHCHD3-202ENST00000423635 SIGLEC5O15389 551 aa13.54□□□□□ -0.24
CHCHD3-202ENST00000423635 H1F0P07305 194 aaKnown RBP13.54□□□□□ -0.24
CHCHD3-202ENST00000423635 ACAA1P09110 424 aaPredicted RBP13.54□□□□□ -0.24
CHCHD3-202ENST00000423635 PAX6P26367 422 aa13.54□□□□□ -0.24
CHCHD3-202ENST00000423635 BMXP51813 675 aa13.54□□□□□ -0.24
CHCHD3-202ENST00000423635 MXRA7P84157 204 aa13.54□□□□□ -0.24
CHCHD3-202ENST00000423635 AGBL2Q5U5Z8 902 aa13.54□□□□□ -0.24
CHCHD3-202ENST00000423635 OR4C15Q8NGM1 316 aa13.54□□□□□ -0.24
CHCHD3-202ENST00000423635 HSH2DQ96JZ2 352 aa13.54□□□□□ -0.24
CHCHD3-202ENST00000423635 KCNJ15Q99712 375 aa13.54□□□□□ -0.24
CHCHD3-202ENST00000423635 SIKE1Q9BRV8 207 aa13.54□□□□□ -0.24
CHCHD3-202ENST00000423635 WDR13Q9H1Z4 485 aa13.54□□□□□ -0.24
CHCHD3-202ENST00000423635 SNTG1Q9NSN8 517 aa13.54□□□□□ -0.24
CHCHD3-202ENST00000423635 GID8Q9NWU2 228 aa13.54□□□□□ -0.24
CHCHD3-202ENST00000423635 RYR2Q92736 4967 aa13.53□□□□□ -0.24
CHCHD3-202ENST00000423635 NKX6-3A6NJ46 265 aa13.53□□□□□ -0.24
CHCHD3-202ENST00000423635 H0YAE9 185 aa13.53□□□□□ -0.24
CHCHD3-202ENST00000423635 ANGPTL7O43827 346 aa13.53□□□□□ -0.24
CHCHD3-202ENST00000423635 IDH3BO43837 385 aa13.53□□□□□ -0.24
CHCHD3-202ENST00000423635 SLC2A1P11166 492 aa13.53□□□□□ -0.24
CHCHD3-202ENST00000423635 NDUFB7P17568 137 aa13.53□□□□□ -0.24
CHCHD3-202ENST00000423635 POU1F1P28069 291 aa13.53□□□□□ -0.24
CHCHD3-202ENST00000423635 SLC6A6P31641 620 aa13.53□□□□□ -0.24
CHCHD3-202ENST00000423635 MSX2P35548 267 aaPredicted RBP13.53□□□□□ -0.24
CHCHD3-202ENST00000423635 RPS27P42677 84 aaKnown RBP13.53□□□□□ -0.24
CHCHD3-202ENST00000423635 PRKXP51817 358 aa13.53□□□□□ -0.24
CHCHD3-202ENST00000423635 KRTAP10-11P60412 298 aa13.53□□□□□ -0.24
CHCHD3-202ENST00000423635 CD83Q01151 205 aa13.53□□□□□ -0.24
CHCHD3-202ENST00000423635 SEC23BQ15437 767 aa13.53□□□□□ -0.24
CHCHD3-202ENST00000423635 SLC16A9Q7RTY1 509 aa13.53□□□□□ -0.24
CHCHD3-202ENST00000423635 SGK3Q96BR1 496 aa13.53□□□□□ -0.24
CHCHD3-202ENST00000423635 B9D2Q9BPU9 175 aa13.53□□□□□ -0.24
CHCHD3-202ENST00000423635 OR52D1Q9H346 318 aa13.53□□□□□ -0.24
CHCHD3-202ENST00000423635 PPP1R3EQ9H7J1 279 aa13.53□□□□□ -0.24
CHCHD3-202ENST00000423635 KRCC1Q9NPI7 259 aaPredicted RBP13.53□□□□□ -0.24
CHCHD3-202ENST00000423635 AP3M1Q9Y2T2 418 aa13.53□□□□□ -0.24
CHCHD3-202ENST00000423635 BIRC6Q9NR09 4857 aa13.52□□□□□ -0.24
CHCHD3-202ENST00000423635 TRBV23-1A0A0A0MS06 115 aa13.52□□□□□ -0.25
CHCHD3-202ENST00000423635 TRBV4-1A0A0J9YWV2 114 aa13.52□□□□□ -0.25
CHCHD3-202ENST00000423635 CXCR6O00574 342 aa13.52□□□□□ -0.25
CHCHD3-202ENST00000423635 CD69Q07108 199 aa13.52□□□□□ -0.25
CHCHD3-202ENST00000423635 FAM76BQ5HYJ3 339 aa13.52□□□□□ -0.25
CHCHD3-202ENST00000423635 ZDHHC21Q8IVQ6 265 aa13.52□□□□□ -0.25
CHCHD3-202ENST00000423635 DYDC1Q8WWB3 177 aa13.52□□□□□ -0.25
CHCHD3-202ENST00000423635 RCC1LQ96I51 464 aaKnown RBP13.52□□□□□ -0.25
CHCHD3-202ENST00000423635 FUZQ9BT04 418 aa13.52□□□□□ -0.25
CHCHD3-202ENST00000423635 COPS4Q9BT78 406 aa13.52□□□□□ -0.25
CHCHD3-202ENST00000423635 PRSS22Q9GZN4 317 aa13.52□□□□□ -0.25
CHCHD3-202ENST00000423635 NSRP1Q9H0G5 558 aaKnown RBP13.52□□□□□ -0.25
CHCHD3-202ENST00000423635 FN3KQ9H479 309 aa13.52□□□□□ -0.25
CHCHD3-202ENST00000423635 HEXA-AS1Q9H8Q6 139 aa13.52□□□□□ -0.25
CHCHD3-202ENST00000423635 MRGBPQ9NV56 204 aa13.52□□□□□ -0.25
CHCHD3-202ENST00000423635 CMTM6Q9NX76 183 aa13.52□□□□□ -0.25
CHCHD3-202ENST00000423635 TCF19Q9Y242 345 aa13.52□□□□□ -0.25
CHCHD3-202ENST00000423635 A0A0G2JND7 137 aa13.51□□□□□ -0.25
CHCHD3-202ENST00000423635 FAM90A8PA6NJQ4 464 aa13.51□□□□□ -0.25
CHCHD3-202ENST00000423635 DUS4LO95620 317 aaKnown RBP13.51□□□□□ -0.25
CHCHD3-202ENST00000423635 TFF1P04155 84 aa13.51□□□□□ -0.25
CHCHD3-202ENST00000423635 PSKH1P11801 424 aa13.51□□□□□ -0.25
CHCHD3-202ENST00000423635 RHCEP18577 417 aa13.51□□□□□ -0.25
CHCHD3-202ENST00000423635 PAICSP22234 425 aaKnown RBP13.51□□□□□ -0.25
CHCHD3-202ENST00000423635 SLC7A2P52569 658 aa13.51□□□□□ -0.25
CHCHD3-202ENST00000423635 SPIBQ01892 262 aa13.51□□□□□ -0.25
CHCHD3-202ENST00000423635 EGFEM1PQ0D2K5 195 aa13.51□□□□□ -0.25
CHCHD3-202ENST00000423635 KLF10Q13118 480 aa13.51□□□□□ -0.25
CHCHD3-202ENST00000423635 CNN3Q15417 329 aaKnown RBP13.51□□□□□ -0.25
CHCHD3-202ENST00000423635 FGD3Q5JSP0 725 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms