RNA–Protein interactions for RNA: ENST00000413141.5

VPS41-204, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-204ENST00000413141 METTL17Q9H7H0 456 aaPredicted RBP5.73□□□□□ -1.49
VPS41-204ENST00000413141 PLGRKTQ9HBL7 147 aa5.73□□□□□ -1.49
VPS41-204ENST00000413141 COQ3Q9NZJ6 369 aa5.73□□□□□ -1.49
VPS41-204ENST00000413141 EIF3KQ9UBQ5 218 aaKnown RBP5.73□□□□□ -1.49
VPS41-204ENST00000413141 CGGBP1Q9UFW8 167 aaPredicted RBP5.73□□□□□ -1.49
VPS41-204ENST00000413141 ADAM30Q9UKF2 790 aa5.73□□□□□ -1.49
VPS41-204ENST00000413141 SPATA2Q9UM82 520 aa5.73□□□□□ -1.49
VPS41-204ENST00000413141 STARD10Q9Y365 291 aa5.73□□□□□ -1.49
VPS41-204ENST00000413141 V9GYH0 126 aa5.73□□□□□ -1.49
VPS41-204ENST00000413141 TPRP12270 2363 aaKnown RBP5.73□□□□□ -1.49
VPS41-204ENST00000413141 RP1L1Q8IWN7 2480 aaPredicted RBP5.72□□□□□ -1.49
VPS41-204ENST00000413141 A0A1B0GUH1 482 aa5.72□□□□□ -1.49
VPS41-204ENST00000413141 GGT3PA6NGU5 568 aa5.72□□□□□ -1.49
VPS41-204ENST00000413141 J3QRK9 145 aa5.72□□□□□ -1.49
VPS41-204ENST00000413141 M0R1B8 84 aa5.72□□□□□ -1.49
VPS41-204ENST00000413141 MAGEB3O15480 346 aa5.72□□□□□ -1.49
VPS41-204ENST00000413141 ALX3O95076 343 aa5.72□□□□□ -1.49
VPS41-204ENST00000413141 ALDOBP05062 364 aa5.72□□□□□ -1.49
VPS41-204ENST00000413141 EIF4EP06730 217 aaKnown RBP5.72□□□□□ -1.49
VPS41-204ENST00000413141 HCKP08631 526 aa5.72□□□□□ -1.49
VPS41-204ENST00000413141 PRF1P14222 555 aa5.72□□□□□ -1.49
VPS41-204ENST00000413141 PPP3CBP16298 524 aa5.72□□□□□ -1.49
VPS41-204ENST00000413141 ELK1P19419 428 aa5.72□□□□□ -1.49
VPS41-204ENST00000413141 GNLYP22749 145 aa5.72□□□□□ -1.49
VPS41-204ENST00000413141 HTR2CP28335 458 aa5.72□□□□□ -1.49
VPS41-204ENST00000413141 ZNF93P35789 620 aaPredicted RBP5.72□□□□□ -1.49
VPS41-204ENST00000413141 POU3F4P49335 361 aa5.72□□□□□ -1.49
VPS41-204ENST00000413141 UCP2P55851 309 aa5.72□□□□□ -1.49
VPS41-204ENST00000413141 ERVS71-1P61550 626 aa5.72□□□□□ -1.49
VPS41-204ENST00000413141 PPP1CBP62140 327 aa5.72□□□□□ -1.49
VPS41-204ENST00000413141 ZNF45Q02386 682 aa5.72□□□□□ -1.49
VPS41-204ENST00000413141 TLE1Q04724 770 aa5.72□□□□□ -1.49
VPS41-204ENST00000413141 P2RY14Q15391 338 aa5.72□□□□□ -1.49
VPS41-204ENST00000413141 UBE2NLQ5JXB2 153 aa5.72□□□□□ -1.49
VPS41-204ENST00000413141 SPANXN2Q5MJ10 180 aa5.72□□□□□ -1.49
VPS41-204ENST00000413141 C1orf100Q5SVJ3 147 aa5.72□□□□□ -1.49
VPS41-204ENST00000413141 CLVS2Q5SYC1 327 aa5.72□□□□□ -1.49
VPS41-204ENST00000413141 ALKBH2Q6NS38 261 aa5.72□□□□□ -1.49
VPS41-204ENST00000413141 CNIH2Q6PI25 160 aa5.72□□□□□ -1.49
VPS41-204ENST00000413141 CRIP3Q6Q6R5 217 aa5.72□□□□□ -1.49
VPS41-204ENST00000413141 FBXW12Q6X9E4 464 aa5.72□□□□□ -1.49
VPS41-204ENST00000413141 C22orf34Q6ZV56 151 aa5.72□□□□□ -1.49
VPS41-204ENST00000413141 KRT74Q7RTS7 529 aa5.72□□□□□ -1.49
VPS41-204ENST00000413141 SSX8Q7RTT4 187 aa5.72□□□□□ -1.49
VPS41-204ENST00000413141 RNF144BQ7Z419 303 aa5.72□□□□□ -1.49
VPS41-204ENST00000413141 LRRC28Q86X40 367 aaPredicted RBP5.72□□□□□ -1.49
VPS41-204ENST00000413141 CDH26Q8IXH8 852 aa5.72□□□□□ -1.49
VPS41-204ENST00000413141 FTMTQ8N4E7 242 aa5.72□□□□□ -1.49
VPS41-204ENST00000413141 CSNK2A3Q8NEV1 391 aa5.72□□□□□ -1.49
VPS41-204ENST00000413141 OR4D6Q8NGJ1 314 aa5.72□□□□□ -1.49
VPS41-204ENST00000413141 OR5L1Q8NGL2 311 aa5.72□□□□□ -1.49
VPS41-204ENST00000413141 OR1J1Q8NGS3 322 aa5.72□□□□□ -1.49
VPS41-204ENST00000413141 SLC25A40Q8TBP6 338 aa5.72□□□□□ -1.49
VPS41-204ENST00000413141 NPRL2Q8WTW4 380 aa5.72□□□□□ -1.49
VPS41-204ENST00000413141 BORCS5Q969J3 196 aa5.72□□□□□ -1.49
VPS41-204ENST00000413141 PIGTQ969N2 578 aa5.72□□□□□ -1.49
VPS41-204ENST00000413141 ITFG2Q969R8 447 aa5.72□□□□□ -1.49
VPS41-204ENST00000413141 SLC25A28Q96A46 364 aa5.72□□□□□ -1.49
VPS41-204ENST00000413141 SPSB1Q96BD6 273 aa5.72□□□□□ -1.49
VPS41-204ENST00000413141 FOXRED1Q96CU9 486 aaPredicted RBP5.72□□□□□ -1.49
VPS41-204ENST00000413141 SLC25A38Q96DW6 304 aa5.72□□□□□ -1.49
VPS41-204ENST00000413141 TECTBQ96PL2 329 aa5.72□□□□□ -1.49
VPS41-204ENST00000413141 SORCS2Q96PQ0 1159 aa5.72□□□□□ -1.49
VPS41-204ENST00000413141 SPACA5Q96QH8 159 aa5.72□□□□□ -1.49
VPS41-204ENST00000413141 UQCC2Q9BRT2 126 aa5.72□□□□□ -1.49
VPS41-204ENST00000413141 BCL2L14Q9BZR8 327 aa5.72□□□□□ -1.49
VPS41-204ENST00000413141 OR2J1Q9GZK6 312 aa5.72□□□□□ -1.49
VPS41-204ENST00000413141 KCNK15Q9H427 330 aa5.72□□□□□ -1.49
VPS41-204ENST00000413141 CNTD2Q9H8S5 307 aa5.72□□□□□ -1.49
VPS41-204ENST00000413141 GPR173Q9NS66 373 aa5.72□□□□□ -1.49
VPS41-204ENST00000413141 CRIM1Q9NZV1 1036 aa5.72□□□□□ -1.49
VPS41-204ENST00000413141 OR5V1Q9UGF6 321 aa5.72□□□□□ -1.49
VPS41-204ENST00000413141 KCNN3Q9UGI6 736 aa5.72□□□□□ -1.49
VPS41-204ENST00000413141 GPR160Q9UJ42 338 aa5.72□□□□□ -1.49
VPS41-204ENST00000413141 ETV7Q9Y603 341 aa5.72□□□□□ -1.49
VPS41-204ENST00000413141 POLEQ07864 2286 aa5.72□□□□□ -1.49
VPS41-204ENST00000413141 KALRNO60229 2985 aa5.71□□□□□ -1.49
VPS41-204ENST00000413141 LOC100289279A0A1B0GTE1 492 aa5.71□□□□□ -1.5
VPS41-204ENST00000413141 NKX2-6A6NCS4 301 aa5.71□□□□□ -1.5
VPS41-204ENST00000413141 CD300LBA8K4G0 201 aa5.71□□□□□ -1.5
VPS41-204ENST00000413141 ZNF850A8MQ14 1090 aa5.71□□□□□ -1.5
VPS41-204ENST00000413141 FAM25AB3EWG3 89 aa5.71□□□□□ -1.5
VPS41-204ENST00000413141 FAM25CB3EWG5 89 aa5.71□□□□□ -1.5
VPS41-204ENST00000413141 FAM25GB3EWG6 89 aa5.71□□□□□ -1.5
VPS41-204ENST00000413141 LDLRAD4O15165 306 aa5.71□□□□□ -1.5
VPS41-204ENST00000413141 GMDSO60547 372 aa5.71□□□□□ -1.5
VPS41-204ENST00000413141 CST4P01036 141 aa5.71□□□□□ -1.5
VPS41-204ENST00000413141 NRASP01111 189 aa5.71□□□□□ -1.5
VPS41-204ENST00000413141 APOA1P02647 267 aa5.71□□□□□ -1.5
VPS41-204ENST00000413141 THBDP07204 575 aa5.71□□□□□ -1.5
VPS41-204ENST00000413141 OCMP0CE72 109 aaPredicted RBP5.71□□□□□ -1.5
VPS41-204ENST00000413141 ARSBP15848 533 aa5.71□□□□□ -1.5
VPS41-204ENST00000413141 PRKACBP22694 351 aa5.71□□□□□ -1.5
VPS41-204ENST00000413141 TUBG1P23258 451 aa5.71□□□□□ -1.5
VPS41-204ENST00000413141 CD40LGP29965 261 aa5.71□□□□□ -1.5
VPS41-204ENST00000413141 MPV17P39210 176 aa5.71□□□□□ -1.5
VPS41-204ENST00000413141 RAD52P43351 418 aa5.71□□□□□ -1.5
VPS41-204ENST00000413141 OR3A4PP47883 348 aa5.71□□□□□ -1.5
VPS41-204ENST00000413141 CAPZA1P52907 286 aa5.71□□□□□ -1.5
VPS41-204ENST00000413141 PLA2G7Q13093 441 aa5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms