RNA–Protein interactions for RNA: ENST00000399079.7

HLA-DQB1-202, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,501 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-202ENST00000399079 YIPF7Q8N8F6 280 aa11.81□□□□□ -0.52
HLA-DQB1-202ENST00000399079 BOLLQ8N9W6 283 aaKnown RBP11.81□□□□□ -0.52
HLA-DQB1-202ENST00000399079 SPERTQ8NA61 448 aa11.81□□□□□ -0.52
HLA-DQB1-202ENST00000399079 CSNK2A3Q8NEV1 391 aa11.81□□□□□ -0.52
HLA-DQB1-202ENST00000399079 OR11L1Q8NGX0 322 aa11.81□□□□□ -0.52
HLA-DQB1-202ENST00000399079 PIGCQ92535 297 aa11.81□□□□□ -0.52
HLA-DQB1-202ENST00000399079 ERGIC1Q969X5 290 aa11.81□□□□□ -0.52
HLA-DQB1-202ENST00000399079 ITPKCQ96DU7 683 aa11.81□□□□□ -0.52
HLA-DQB1-202ENST00000399079 RNFT2Q96EX2 444 aa11.81□□□□□ -0.52
HLA-DQB1-202ENST00000399079 FAHD2AQ96GK7 314 aa11.81□□□□□ -0.52
HLA-DQB1-202ENST00000399079 FAM71F1Q96KD3 344 aaPredicted RBP11.81□□□□□ -0.52
HLA-DQB1-202ENST00000399079 TMEM246Q9BRR3 403 aa11.81□□□□□ -0.52
HLA-DQB1-202ENST00000399079 FN3KRPQ9HA64 309 aa11.81□□□□□ -0.52
HLA-DQB1-202ENST00000399079 PATZ1Q9HBE1 687 aaKnown RBP11.81□□□□□ -0.52
HLA-DQB1-202ENST00000399079 GPR84Q9NQS5 396 aa11.81□□□□□ -0.52
HLA-DQB1-202ENST00000399079 C1orf123Q9NWV4 160 aa11.81□□□□□ -0.52
HLA-DQB1-202ENST00000399079 NUFIP1Q9UHK0 495 aaKnown RBP11.81□□□□□ -0.52
HLA-DQB1-202ENST00000399079 ZNF391Q9UJN7 358 aa11.81□□□□□ -0.52
HLA-DQB1-202ENST00000399079 R4GMQ9 66 aa11.81□□□□□ -0.52
HLA-DQB1-202ENST00000399079 PPIAL4EA0A075B759 164 aa11.81□□□□□ -0.52
HLA-DQB1-202ENST00000399079 A6NLC8 198 aa11.81□□□□□ -0.52
HLA-DQB1-202ENST00000399079 CEACAM18A8MTB9 384 aa11.81□□□□□ -0.52
HLA-DQB1-202ENST00000399079 PPIAL4DF5H284 164 aa11.81□□□□□ -0.52
HLA-DQB1-202ENST00000399079 KRT8P05787 483 aa11.81□□□□□ -0.52
HLA-DQB1-202ENST00000399079 FAM157CP0CG43 387 aa11.81□□□□□ -0.52
HLA-DQB1-202ENST00000399079 PPIAL4FP0DN26 164 aa11.81□□□□□ -0.52
HLA-DQB1-202ENST00000399079 GNALP38405 381 aa11.81□□□□□ -0.52
HLA-DQB1-202ENST00000399079 CSNK2BP67870 215 aa11.81□□□□□ -0.52
HLA-DQB1-202ENST00000399079 PRDX4Q13162 271 aa11.81□□□□□ -0.52
HLA-DQB1-202ENST00000399079 TMED1Q13445 227 aa11.81□□□□□ -0.52
HLA-DQB1-202ENST00000399079 KRTAP21-3Q3LHN1 58 aa11.81□□□□□ -0.52
HLA-DQB1-202ENST00000399079 LIPNQ5VXI9 398 aa11.81□□□□□ -0.52
HLA-DQB1-202ENST00000399079 MEDAGQ5VYS4 303 aa11.81□□□□□ -0.52
HLA-DQB1-202ENST00000399079 C11orf53Q8IXP5 236 aa11.81□□□□□ -0.52
HLA-DQB1-202ENST00000399079 FTMTQ8N4E7 242 aa11.81□□□□□ -0.52
HLA-DQB1-202ENST00000399079 PLPP7Q8NBV4 271 aa11.81□□□□□ -0.52
HLA-DQB1-202ENST00000399079 DEFB108BQ8NET1 73 aa11.81□□□□□ -0.52
HLA-DQB1-202ENST00000399079 METTL17Q9H7H0 456 aaPredicted RBP11.81□□□□□ -0.52
HLA-DQB1-202ENST00000399079 AMBNQ9NP70 447 aa11.81□□□□□ -0.52
HLA-DQB1-202ENST00000399079 C14orf119Q9NWQ9 140 aa11.81□□□□□ -0.52
HLA-DQB1-202ENST00000399079 RNF7Q9UBF6 113 aa11.81□□□□□ -0.52
HLA-DQB1-202ENST00000399079 LPAR3Q9UBY5 353 aa11.81□□□□□ -0.52
HLA-DQB1-202ENST00000399079 SLC22A13Q9Y226 551 aa11.81□□□□□ -0.52
HLA-DQB1-202ENST00000399079 PPIAL4AQ9Y536 164 aa11.81□□□□□ -0.52
HLA-DQB1-202ENST00000399079 TRAV20A0A0B4J274 112 aa11.8□□□□□ -0.52
HLA-DQB1-202ENST00000399079 hCG_1807616A0A1W2PRN6 198 aa11.8□□□□□ -0.52
HLA-DQB1-202ENST00000399079 IGLV3-1P01715 115 aa11.8□□□□□ -0.52
HLA-DQB1-202ENST00000399079 SRD5A1P18405 259 aa11.8□□□□□ -0.52
HLA-DQB1-202ENST00000399079 PEX2P28328 305 aa11.8□□□□□ -0.52
HLA-DQB1-202ENST00000399079 THBS2P35442 1172 aa11.8□□□□□ -0.52
HLA-DQB1-202ENST00000399079 MAP2K3P46734 347 aa11.8□□□□□ -0.52
HLA-DQB1-202ENST00000399079 ZNF85Q03923 595 aa11.8□□□□□ -0.52
HLA-DQB1-202ENST00000399079 ZNF154Q13106 437 aa11.8□□□□□ -0.52
HLA-DQB1-202ENST00000399079 ODF4Q2M2E3 257 aa11.8□□□□□ -0.52
HLA-DQB1-202ENST00000399079 ZNF404Q494X3 552 aa11.8□□□□□ -0.52
HLA-DQB1-202ENST00000399079 TP53I3Q53FA7 332 aa11.8□□□□□ -0.52
HLA-DQB1-202ENST00000399079 BCL2L15Q5TBC7 163 aa11.8□□□□□ -0.52
HLA-DQB1-202ENST00000399079 LYPD2Q6UXB3 125 aa11.8□□□□□ -0.52
HLA-DQB1-202ENST00000399079 ELMOD2Q8IZ81 293 aa11.8□□□□□ -0.52
HLA-DQB1-202ENST00000399079 MUC20Q8N307 709 aaPredicted RBP11.8□□□□□ -0.52
HLA-DQB1-202ENST00000399079 OR1M1Q8NGA1 313 aa11.8□□□□□ -0.52
HLA-DQB1-202ENST00000399079 RHOXF1Q8NHV9 184 aa11.8□□□□□ -0.52
HLA-DQB1-202ENST00000399079 RORBQ92753 470 aa11.8□□□□□ -0.52
HLA-DQB1-202ENST00000399079 FGF23Q9GZV9 251 aaPredicted RBP11.8□□□□□ -0.52
HLA-DQB1-202ENST00000399079 SMPD3Q9NY59 655 aaPredicted RBP11.8□□□□□ -0.52
HLA-DQB1-202ENST00000399079 OR52A1Q9UKL2 312 aa11.8□□□□□ -0.52
HLA-DQB1-202ENST00000399079 FBN1P35555 2871 aaKnown RBP11.79□□□□□ -0.52
HLA-DQB1-202ENST00000399079 WNK2Q9Y3S1 2297 aa11.79□□□□□ -0.52
HLA-DQB1-202ENST00000399079 METTL15A6NJ78 407 aa11.79□□□□□ -0.52
HLA-DQB1-202ENST00000399079 ANXA2P2A6NMY6 339 aa11.79□□□□□ -0.52
HLA-DQB1-202ENST00000399079 F5H0A9 414 aaPredicted RBP11.79□□□□□ -0.52
HLA-DQB1-202ENST00000399079 C3orf80F5H4A9 247 aa11.79□□□□□ -0.52
HLA-DQB1-202ENST00000399079 H3BSH0 61 aa11.79□□□□□ -0.52
HLA-DQB1-202ENST00000399079 J3QRE1 110 aa11.79□□□□□ -0.52
HLA-DQB1-202ENST00000399079 SLC16A6O15403 523 aa11.79□□□□□ -0.52
HLA-DQB1-202ENST00000399079 PHF1O43189 567 aaPredicted RBP11.79□□□□□ -0.52
HLA-DQB1-202ENST00000399079 CLIC3O95833 236 aa11.79□□□□□ -0.52
HLA-DQB1-202ENST00000399079 CST4P01036 141 aa11.79□□□□□ -0.52
HLA-DQB1-202ENST00000399079 AVPP01185 164 aa11.79□□□□□ -0.52
HLA-DQB1-202ENST00000399079 WNT2P09544 360 aa11.79□□□□□ -0.52
HLA-DQB1-202ENST00000399079 RPS2P15880 293 aaKnown RBP11.79□□□□□ -0.52
HLA-DQB1-202ENST00000399079 FAHP16930 419 aa11.79□□□□□ -0.52
HLA-DQB1-202ENST00000399079 HNF1AP20823 631 aa11.79□□□□□ -0.52
HLA-DQB1-202ENST00000399079 CD80P33681 288 aa11.79□□□□□ -0.52
HLA-DQB1-202ENST00000399079 GABPB1Q06547 395 aaPredicted RBP11.79□□□□□ -0.52
HLA-DQB1-202ENST00000399079 MZT1Q08AG7 82 aa11.79□□□□□ -0.52
HLA-DQB1-202ENST00000399079 C1orf229Q6ZS94 237 aaPredicted RBP11.79□□□□□ -0.52
HLA-DQB1-202ENST00000399079 GCSAMQ8N6F7 178 aa11.79□□□□□ -0.52
HLA-DQB1-202ENST00000399079 SEMA6DQ8NFY4 1073 aa11.79□□□□□ -0.52
HLA-DQB1-202ENST00000399079 HPSE2Q8WWQ2 592 aa11.79□□□□□ -0.52
HLA-DQB1-202ENST00000399079 OR5P3Q8WZ94 311 aa11.79□□□□□ -0.52
HLA-DQB1-202ENST00000399079 MMP26Q9NRE1 261 aa11.79□□□□□ -0.52
HLA-DQB1-202ENST00000399079 GNG8Q9UK08 70 aa11.79□□□□□ -0.52
HLA-DQB1-202ENST00000399079 PIGLQ9Y2B2 252 aa11.79□□□□□ -0.52
HLA-DQB1-202ENST00000399079 MPC1Q9Y5U8 109 aa11.79□□□□□ -0.52
HLA-DQB1-202ENST00000399079 SNX5Q9Y5X3 404 aa11.79□□□□□ -0.52
HLA-DQB1-202ENST00000399079 ATRQ13535 2644 aa11.78□□□□□ -0.52
HLA-DQB1-202ENST00000399079 ZNF816-ZNF321PA0A0X1KG74 233 aa11.78□□□□□ -0.52
HLA-DQB1-202ENST00000399079 A0A1B0GTI1 187 aa11.78□□□□□ -0.52
HLA-DQB1-202ENST00000399079 A6NIN4 97 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms