RNA–Protein interactions for RNA: ENST00000397397.6

TSPAN4-203, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN4, Length 1,423 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-203ENST00000397397 CGGBP1Q9UFW8 167 aaPredicted RBP20.14■□□□□ 0.81
TSPAN4-203ENST00000397397 SF3B6Q9Y3B4 125 aaKnown RBP20.14■□□□□ 0.81
TSPAN4-203ENST00000397397 NAT2P11245 290 aa20.13■□□□□ 0.81
TSPAN4-203ENST00000397397 CA6P23280 308 aa20.13■□□□□ 0.81
TSPAN4-203ENST00000397397 KRTAP10-9P60411 292 aa20.13■□□□□ 0.81
TSPAN4-203ENST00000397397 Q499Y3 187 aa20.13■□□□□ 0.81
TSPAN4-203ENST00000397397 C11orf71Q6IPW1 123 aa20.13■□□□□ 0.81
TSPAN4-203ENST00000397397 Q6ZR03 302 aa20.13■□□□□ 0.81
TSPAN4-203ENST00000397397 C10orf35Q96D05 121 aa20.13■□□□□ 0.81
TSPAN4-203ENST00000397397 ADAT3Q96EY9 351 aaPredicted RBP20.13■□□□□ 0.81
TSPAN4-203ENST00000397397 OR14A2Q96R54 314 aa20.13■□□□□ 0.81
TSPAN4-203ENST00000397397 SLC30A2Q9BRI3 323 aa20.13■□□□□ 0.81
TSPAN4-203ENST00000397397 DSCAMO60469 2012 aa20.13■□□□□ 0.81
TSPAN4-203ENST00000397397 ZSCAN5BA6NJL1 495 aa20.12■□□□□ 0.81
TSPAN4-203ENST00000397397 SERPINA3P01011 423 aa20.12■□□□□ 0.81
TSPAN4-203ENST00000397397 CST4P01036 141 aa20.12■□□□□ 0.81
TSPAN4-203ENST00000397397 TFAP2AP05549 437 aa20.12■□□□□ 0.81
TSPAN4-203ENST00000397397 CD2P06729 351 aa20.12■□□□□ 0.81
TSPAN4-203ENST00000397397 PSMA1P25786 263 aaKnown RBP20.12■□□□□ 0.81
TSPAN4-203ENST00000397397 GNALP38405 381 aa20.12■□□□□ 0.81
TSPAN4-203ENST00000397397 ZNF81P51508 661 aa20.12■□□□□ 0.81
TSPAN4-203ENST00000397397 ACSM3Q53FZ2 586 aa20.12■□□□□ 0.81
TSPAN4-203ENST00000397397 ZMAT1Q5H9K5 638 aa20.12■□□□□ 0.81
TSPAN4-203ENST00000397397 OR13G1Q8NGZ3 307 aa20.12■□□□□ 0.81
TSPAN4-203ENST00000397397 ZNF850A8MQ14 1090 aa20.11■□□□□ 0.81
TSPAN4-203ENST00000397397 ZNF879B4DU55 563 aa20.11■□□□□ 0.81
TSPAN4-203ENST00000397397 BMP4P12644 408 aa20.11■□□□□ 0.81
TSPAN4-203ENST00000397397 CD36P16671 472 aa20.11■□□□□ 0.81
TSPAN4-203ENST00000397397 PRDX4Q13162 271 aa20.11■□□□□ 0.81
TSPAN4-203ENST00000397397 INSL4Q14641 139 aa20.11■□□□□ 0.81
TSPAN4-203ENST00000397397 CLVS2Q5SYC1 327 aa20.11■□□□□ 0.81
TSPAN4-203ENST00000397397 NRGNQ92686 78 aa20.11■□□□□ 0.81
TSPAN4-203ENST00000397397 PIGTQ969N2 578 aa20.11■□□□□ 0.81
TSPAN4-203ENST00000397397 TMEM106AQ96A25 262 aa20.11■□□□□ 0.81
TSPAN4-203ENST00000397397 SLC22A4Q9H015 551 aa20.11■□□□□ 0.81
TSPAN4-203ENST00000397397 LIME1Q9H400 295 aa20.11■□□□□ 0.81
TSPAN4-203ENST00000397397 PPP1R3EQ9H7J1 279 aa20.11■□□□□ 0.81
TSPAN4-203ENST00000397397 FBXO9Q9UK97 447 aaPredicted RBP20.11■□□□□ 0.81
TSPAN4-203ENST00000397397 PMF1-BGLAPU3KQ54 211 aa20.11■□□□□ 0.81
TSPAN4-203ENST00000397397 DCHS2Q6V1P9 2916 aa20.11■□□□□ 0.81
TSPAN4-203ENST00000397397 SPRY3O43610 288 aa20.1■□□□□ 0.81
TSPAN4-203ENST00000397397 RGS9O75916 674 aaPredicted RBP20.1■□□□□ 0.81
TSPAN4-203ENST00000397397 HLA-DPB1P04440 258 aa20.1■□□□□ 0.81
TSPAN4-203ENST00000397397 TGFBR2P37173 567 aa20.1■□□□□ 0.81
TSPAN4-203ENST00000397397 ALDH3B2P48448 385 aa20.1■□□□□ 0.81
TSPAN4-203ENST00000397397 OR8G1Q15617 311 aa20.1■□□□□ 0.81
TSPAN4-203ENST00000397397 CEACAM19Q7Z692 300 aa20.1■□□□□ 0.81
TSPAN4-203ENST00000397397 OR2Z1Q8NG97 314 aa20.1■□□□□ 0.81
TSPAN4-203ENST00000397397 THRSPQ92748 146 aa20.1■□□□□ 0.81
TSPAN4-203ENST00000397397 DVL3Q92997 716 aaPredicted RBP20.1■□□□□ 0.81
TSPAN4-203ENST00000397397 TMIGD2Q96BF3 282 aa20.1■□□□□ 0.81
TSPAN4-203ENST00000397397 CCL19Q99731 98 aa20.1■□□□□ 0.81
TSPAN4-203ENST00000397397 ADAT1Q9BUB4 502 aaKnown RBP20.1■□□□□ 0.81
TSPAN4-203ENST00000397397 CACNG6Q9BXT2 260 aa20.1■□□□□ 0.81
TSPAN4-203ENST00000397397 MS4A5Q9H3V2 200 aa20.1■□□□□ 0.81
TSPAN4-203ENST00000397397 GPR173Q9NS66 373 aa20.1■□□□□ 0.81
TSPAN4-203ENST00000397397 MPC1Q9Y5U8 109 aa20.1■□□□□ 0.81
TSPAN4-203ENST00000397397 A0A1W2PPK0 400 aa20.1■□□□□ 0.81
TSPAN4-203ENST00000397397 C17orf100A8MU93 164 aa20.1■□□□□ 0.81
TSPAN4-203ENST00000397397 H0YL77 283 aa20.1■□□□□ 0.81
TSPAN4-203ENST00000397397 MLNRO43193 412 aa20.1■□□□□ 0.81
TSPAN4-203ENST00000397397 GMDSO60547 372 aa20.1■□□□□ 0.81
TSPAN4-203ENST00000397397 NRASP01111 189 aa20.1■□□□□ 0.81
TSPAN4-203ENST00000397397 MAPK3P27361 379 aaPredicted RBP20.1■□□□□ 0.81
TSPAN4-203ENST00000397397 PPOXP50336 477 aa20.1■□□□□ 0.81
TSPAN4-203ENST00000397397 FABP5Q01469 135 aa20.1■□□□□ 0.81
TSPAN4-203ENST00000397397 TMEM42Q69YG0 159 aa20.1■□□□□ 0.81
TSPAN4-203ENST00000397397 UNQ9370/PRO34162Q6UXP9 181 aa20.1■□□□□ 0.81
TSPAN4-203ENST00000397397 MOB3CQ70IA8 216 aa20.1■□□□□ 0.81
TSPAN4-203ENST00000397397 KRT74Q7RTS7 529 aa20.1■□□□□ 0.81
TSPAN4-203ENST00000397397 SERPINA12Q8IW75 414 aa20.1■□□□□ 0.81
TSPAN4-203ENST00000397397 ZCCHC24Q8N2G6 241 aaKnown RBP20.1■□□□□ 0.81
TSPAN4-203ENST00000397397 PARP16Q8N5Y8 322 aa20.1■□□□□ 0.81
TSPAN4-203ENST00000397397 OR10AD1Q8NGE0 317 aa20.1■□□□□ 0.81
TSPAN4-203ENST00000397397 PP6455Q8WZ26 134 aa20.1■□□□□ 0.81
TSPAN4-203ENST00000397397 DERL3Q96Q80 235 aa20.1■□□□□ 0.81
TSPAN4-203ENST00000397397 VRK1Q99986 396 aaPredicted RBP20.1■□□□□ 0.81
TSPAN4-203ENST00000397397 TPK1Q9H3S4 243 aa20.1■□□□□ 0.81
TSPAN4-203ENST00000397397 ZDHHC8Q9ULC8 765 aa20.1■□□□□ 0.81
TSPAN4-203ENST00000397397 NOP16Q9Y3C1 178 aaKnown RBP20.1■□□□□ 0.81
TSPAN4-203ENST00000397397 ARFGEF3Q5TH69 2177 aa20.09■□□□□ 0.81
TSPAN4-203ENST00000397397 FBN2P35556 2912 aa20.09■□□□□ 0.81
TSPAN4-203ENST00000397397 NAV2Q8IVL1 2488 aa20.09■□□□□ 0.81
TSPAN4-203ENST00000397397 TRBV5-7A0A0A0MS05 114 aa20.09■□□□□ 0.81
TSPAN4-203ENST00000397397 ANKRD61A6NGH8 418 aa20.09■□□□□ 0.81
TSPAN4-203ENST00000397397 GABRPO00591 440 aa20.09■□□□□ 0.81
TSPAN4-203ENST00000397397 GATBO75879 557 aaKnown RBP20.09■□□□□ 0.81
TSPAN4-203ENST00000397397 IGHV1-46P01743 117 aa20.09■□□□□ 0.81
TSPAN4-203ENST00000397397 RPL5P46777 297 aaKnown RBP20.09■□□□□ 0.81
TSPAN4-203ENST00000397397 CEP78Q5JTW2 689 aa20.09■□□□□ 0.81
TSPAN4-203ENST00000397397 PLCXD3Q63HM9 321 aa20.09■□□□□ 0.81
TSPAN4-203ENST00000397397 TMEM91Q6ZNR0 172 aa20.09■□□□□ 0.81
TSPAN4-203ENST00000397397 ZDHHC23Q8IYP9 409 aa20.09■□□□□ 0.81
TSPAN4-203ENST00000397397 OR13F1Q8NGS4 319 aa20.09■□□□□ 0.81
TSPAN4-203ENST00000397397 UBASH3BQ8TF42 649 aa20.09■□□□□ 0.81
TSPAN4-203ENST00000397397 YIPF6Q96EC8 236 aa20.09■□□□□ 0.81
TSPAN4-203ENST00000397397 ELMOD3Q96FG2 381 aa20.09■□□□□ 0.81
TSPAN4-203ENST00000397397 CHST5Q9GZS9 411 aa20.09■□□□□ 0.81
TSPAN4-203ENST00000397397 ABCB9Q9NP78 766 aa20.09■□□□□ 0.81
TSPAN4-203ENST00000397397 MAST4O15021 2626 aa20.09■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms