RNA–Protein interactions for RNA: ENST00000396521.3

EXOSC3-202, Transcript of exosome component 3, humanhuman

TSL 2 BASIC

Gene EXOSC3, Length 768 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-202ENST00000396521 PPA2Q9H2U2 334 aa14.34□□□□□ -0.11
EXOSC3-202ENST00000396521 TOR3AQ9H497 397 aa14.34□□□□□ -0.11
EXOSC3-202ENST00000396521 ABCB9Q9NP78 766 aa14.34□□□□□ -0.11
EXOSC3-202ENST00000396521 HAO2Q9NYQ3 351 aa14.34□□□□□ -0.11
EXOSC3-202ENST00000396521 GMPR2Q9P2T1 348 aaKnown RBP14.34□□□□□ -0.11
EXOSC3-202ENST00000396521 MAB21L2Q9Y586 359 aa14.34□□□□□ -0.11
EXOSC3-202ENST00000396521 NKX6-3A6NJ46 265 aa14.33□□□□□ -0.12
EXOSC3-202ENST00000396521 ANXA2P2A6NMY6 339 aa14.33□□□□□ -0.12
EXOSC3-202ENST00000396521 ZNF878C9JN71 531 aa14.33□□□□□ -0.12
EXOSC3-202ENST00000396521 FMO3P31513 532 aa14.33□□□□□ -0.12
EXOSC3-202ENST00000396521 GNALP38405 381 aa14.33□□□□□ -0.12
EXOSC3-202ENST00000396521 GSSP48637 474 aa14.33□□□□□ -0.12
EXOSC3-202ENST00000396521 PRKXP51817 358 aa14.33□□□□□ -0.12
EXOSC3-202ENST00000396521 EFNB2P52799 333 aa14.33□□□□□ -0.12
EXOSC3-202ENST00000396521 TSPAN31Q12999 210 aa14.33□□□□□ -0.12
EXOSC3-202ENST00000396521 TIGD6Q17RP2 521 aa14.33□□□□□ -0.12
EXOSC3-202ENST00000396521 LIAT1Q6ZQX7 453 aa14.33□□□□□ -0.12
EXOSC3-202ENST00000396521 FAM86B1Q8N7N1 296 aa14.33□□□□□ -0.12
EXOSC3-202ENST00000396521 OR5D13Q8NGL4 314 aa14.33□□□□□ -0.12
EXOSC3-202ENST00000396521 GNPDA2Q8TDQ7 276 aa14.33□□□□□ -0.12
EXOSC3-202ENST00000396521 MCUR1Q96AQ8 359 aa14.33□□□□□ -0.12
EXOSC3-202ENST00000396521 MICU1Q9BPX6 476 aa14.33□□□□□ -0.12
EXOSC3-202ENST00000396521 RGCCQ9H4X1 137 aa14.33□□□□□ -0.12
EXOSC3-202ENST00000396521 GORASP2Q9H8Y8 452 aa14.33□□□□□ -0.12
EXOSC3-202ENST00000396521 ABCD2Q9UBJ2 740 aa14.33□□□□□ -0.12
EXOSC3-202ENST00000396521 NOTCH3Q9UM47 2321 aa14.32□□□□□ -0.12
EXOSC3-202ENST00000396521 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP14.32□□□□□ -0.12
EXOSC3-202ENST00000396521 ACOT8O14734 319 aa14.32□□□□□ -0.12
EXOSC3-202ENST00000396521 SNX3O60493 162 aa14.32□□□□□ -0.12
EXOSC3-202ENST00000396521 NCK1P16333 377 aa14.32□□□□□ -0.12
EXOSC3-202ENST00000396521 ENTPD1P49961 510 aa14.32□□□□□ -0.12
EXOSC3-202ENST00000396521 CAV3P56539 151 aa14.32□□□□□ -0.12
EXOSC3-202ENST00000396521 FAM3AP98173 230 aa14.32□□□□□ -0.12
EXOSC3-202ENST00000396521 EMX1Q04741 257 aaPredicted RBP14.32□□□□□ -0.12
EXOSC3-202ENST00000396521 FAM189A2Q15884 450 aa14.32□□□□□ -0.12
EXOSC3-202ENST00000396521 SLC35F1Q5T1Q4 408 aa14.32□□□□□ -0.12
EXOSC3-202ENST00000396521 STUMQ69YW2 141 aa14.32□□□□□ -0.12
EXOSC3-202ENST00000396521 Q6ZPA2 131 aa14.32□□□□□ -0.12
EXOSC3-202ENST00000396521 SLC16A9Q7RTY1 509 aa14.32□□□□□ -0.12
EXOSC3-202ENST00000396521 LNX2Q8N448 690 aa14.32□□□□□ -0.12
EXOSC3-202ENST00000396521 LINC00471Q8N535 108 aa14.32□□□□□ -0.12
EXOSC3-202ENST00000396521 FAM216BQ8N7L0 139 aa14.32□□□□□ -0.12
EXOSC3-202ENST00000396521 OR4S1Q8NGB4 309 aa14.32□□□□□ -0.12
EXOSC3-202ENST00000396521 SLAMF6Q96DU3 332 aa14.32□□□□□ -0.12
EXOSC3-202ENST00000396521 PYURFQ96I23 114 aa14.32□□□□□ -0.12
EXOSC3-202ENST00000396521 DDOQ99489 341 aa14.32□□□□□ -0.12
EXOSC3-202ENST00000396521 SEMA6AQ9H2E6 1030 aa14.32□□□□□ -0.12
EXOSC3-202ENST00000396521 CENPMQ9NSP4 180 aa14.32□□□□□ -0.12
EXOSC3-202ENST00000396521 DNAJB11Q9UBS4 358 aa14.32□□□□□ -0.12
EXOSC3-202ENST00000396521 MPC1Q9Y5U8 109 aa14.32□□□□□ -0.12
EXOSC3-202ENST00000396521 COMMD3-BMI1R4GMX3 469 aa14.32□□□□□ -0.12
EXOSC3-202ENST00000396521 TMEM210A6NLX4 147 aa14.31□□□□□ -0.12
EXOSC3-202ENST00000396521 DIRAS1O95057 198 aa14.31□□□□□ -0.12
EXOSC3-202ENST00000396521 PYCR1P32322 319 aa14.31□□□□□ -0.12
EXOSC3-202ENST00000396521 SPIBQ01892 262 aa14.31□□□□□ -0.12
EXOSC3-202ENST00000396521 IKZF1Q13422 519 aa14.31□□□□□ -0.12
EXOSC3-202ENST00000396521 WDR86Q86TI4 376 aa14.31□□□□□ -0.12
EXOSC3-202ENST00000396521 OR51G2Q8NGK0 314 aa14.31□□□□□ -0.12
EXOSC3-202ENST00000396521 H1FXQ92522 213 aaKnown RBP14.31□□□□□ -0.12
EXOSC3-202ENST00000396521 ITFG2Q969R8 447 aa14.31□□□□□ -0.12
EXOSC3-202ENST00000396521 REEP6Q96HR9 211 aa14.31□□□□□ -0.12
EXOSC3-202ENST00000396521 RTL8AQ9BWD3 113 aa14.31□□□□□ -0.12
EXOSC3-202ENST00000396521 NPFFR1Q9GZQ6 430 aa14.31□□□□□ -0.12
EXOSC3-202ENST00000396521 MEGF9Q9H1U4 602 aa14.31□□□□□ -0.12
EXOSC3-202ENST00000396521 FN3KQ9H479 309 aa14.31□□□□□ -0.12
EXOSC3-202ENST00000396521 SPAG4Q9NPE6 437 aa14.31□□□□□ -0.12
EXOSC3-202ENST00000396521 SLC25A10Q9UBX3 287 aaPredicted RBP14.31□□□□□ -0.12
EXOSC3-202ENST00000396521 TRBV23-1A0A0A0MS06 115 aa14.3□□□□□ -0.12
EXOSC3-202ENST00000396521 ZNF593O00488 134 aaPredicted RBP14.3□□□□□ -0.12
EXOSC3-202ENST00000396521 CDIPTO14735 213 aa14.3□□□□□ -0.12
EXOSC3-202ENST00000396521 TBX1O43435 398 aa14.3□□□□□ -0.12
EXOSC3-202ENST00000396521 KRT36O76013 467 aa14.3□□□□□ -0.12
EXOSC3-202ENST00000396521 SPARCP09486 303 aa14.3□□□□□ -0.12
EXOSC3-202ENST00000396521 SLC2A1P11166 492 aa14.3□□□□□ -0.12
EXOSC3-202ENST00000396521 PAICSP22234 425 aaKnown RBP14.3□□□□□ -0.12
EXOSC3-202ENST00000396521 NUDT2P50583 147 aa14.3□□□□□ -0.12
EXOSC3-202ENST00000396521 LOXL3P58215 753 aa14.3□□□□□ -0.12
EXOSC3-202ENST00000396521 ZNF788Q6ZQV5 615 aa14.3□□□□□ -0.12
EXOSC3-202ENST00000396521 PAPD5Q8NDF8 572 aaKnown RBP14.3□□□□□ -0.12
EXOSC3-202ENST00000396521 SGK3Q96BR1 496 aa14.3□□□□□ -0.12
EXOSC3-202ENST00000396521 CMTM5Q96DZ9 223 aa14.3□□□□□ -0.12
EXOSC3-202ENST00000396521 CLPTM1LQ96KA5 538 aa14.3□□□□□ -0.12
EXOSC3-202ENST00000396521 RAB3IPQ96QF0 476 aaPredicted RBP14.3□□□□□ -0.12
EXOSC3-202ENST00000396521 SSX3Q99909 188 aa14.3□□□□□ -0.12
EXOSC3-202ENST00000396521 IL20Q9NYY1 176 aa14.3□□□□□ -0.12
EXOSC3-202ENST00000396521 ARL2BPQ9Y2Y0 163 aa14.3□□□□□ -0.12
EXOSC3-202ENST00000396521 N6AMT1Q9Y5N5 214 aa14.3□□□□□ -0.12
EXOSC3-202ENST00000396521 CDH10Q9Y6N8 788 aa14.3□□□□□ -0.12
EXOSC3-202ENST00000396521 TET2Q6N021 2002 aaPredicted RBP14.3□□□□□ -0.12
EXOSC3-202ENST00000396521 A0A1B0GW55 424 aa14.29□□□□□ -0.12
EXOSC3-202ENST00000396521 A0A1W2PQ09 198 aa14.29□□□□□ -0.12
EXOSC3-202ENST00000396521 TVP23AA6NH52 213 aa14.29□□□□□ -0.12
EXOSC3-202ENST00000396521 H3BUX3 64 aa14.29□□□□□ -0.12
EXOSC3-202ENST00000396521 FAM107AO95990 144 aa14.29□□□□□ -0.12
EXOSC3-202ENST00000396521 ANXA2P07355 339 aaKnown RBP14.29□□□□□ -0.12
EXOSC3-202ENST00000396521 DUX4L2P0CJ85 424 aa14.29□□□□□ -0.12
EXOSC3-202ENST00000396521 DUX4L3P0CJ86 424 aa14.29□□□□□ -0.12
EXOSC3-202ENST00000396521 DUX4L4P0CJ87 422 aa14.29□□□□□ -0.12
EXOSC3-202ENST00000396521 DUX4L5P0CJ88 424 aa14.29□□□□□ -0.12
EXOSC3-202ENST00000396521 DUX4L6P0CJ89 424 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms